EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000016780 (Gene tree)
Gene ID: -
Gene Symbol: tarbp2
Alias: fj51e12|wu:fj51e12|zgc:63778
Full Name: TAR (HIV) RNA binding protein 2
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 10035 bases
Position: chrCCOE01000519.1:2794882-2804916
Accession: ZDB-GENE-030131-8085
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000021685	dsrm	PF00035.26	1.7e-35	1	2
ENSACIP00000021685	dsrm	PF00035.26	1.7e-35	2	2
ENSACIP00000021685	DND1_DSRM	PF14709.7	1.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000022253	-	1020	-	ENSACIP00000021685	339 (aa)	-	-

Gene Model

Click here to download ENSACIG00000016780's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000016780's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000016780	tarbp2	94	42.188	ENSACIG00000020131	prkra	98	39.809

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000016780	tarbp2	100	64.481	ENSG00000139546	TARBP2	100	66.377	Homo_sapiens
ENSACIG00000016780	tarbp2	100	95.072	ENSAPOG00000019892	tarbp2	100	95.072	Acanthochromis_polyacanthus
ENSACIG00000016780	tarbp2	100	65.027	ENSAMEG00000012601	TARBP2	100	64.481	Ailuropoda_melanoleuca
ENSACIG00000016780	tarbp2	100	95.072	ENSAOCG00000005201	tarbp2	100	95.072	Amphiprion_ocellaris
ENSACIG00000016780	tarbp2	100	95.072	ENSAPEG00000008376	tarbp2	100	95.072	Amphiprion_percula
ENSACIG00000016780	tarbp2	100	93.623	ENSATEG00000025012	tarbp2	100	93.623	Anabas_testudineus
ENSACIG00000016780	tarbp2	100	67.127	ENSACAG00000001100	TARBP2	100	66.575	Anolis_carolinensis
ENSACIG00000016780	tarbp2	100	65.027	ENSANAG00000034453	TARBP2	94	75.676	Aotus_nancymaae
ENSACIG00000016780	tarbp2	97	94.925	ENSACLG00000018569	tarbp2	97	94.925	Astatotilapia_calliptera
ENSACIG00000016780	tarbp2	100	82.370	ENSAMXG00000016665	tarbp2	100	82.081	Astyanax_mexicanus
ENSACIG00000016780	tarbp2	100	65.847	ENSBTAG00000000435	TARBP2	100	65.574	Bos_taurus
ENSACIG00000016780	tarbp2	100	65.301	ENSCJAG00000018668	TARBP2	100	64.754	Callithrix_jacchus
ENSACIG00000016780	tarbp2	100	68.300	ENSCAFG00000006874	TARBP2	100	68.314	Canis_familiaris
ENSACIG00000016780	tarbp2	100	64.754	ENSCAFG00020020735	TARBP2	100	66.667	Canis_lupus_dingo
ENSACIG00000016780	tarbp2	100	64.865	ENSCHIG00000026017	TARBP2	100	64.324	Capra_hircus
ENSACIG00000016780	tarbp2	100	65.301	ENSTSYG00000035683	TARBP2	94	75.676	Carlito_syrichta
ENSACIG00000016780	tarbp2	65	70.536	ENSCAPG00000008981	TARBP2	99	70.536	Cavia_aperea
ENSACIG00000016780	tarbp2	100	65.301	ENSCPOG00000001009	TARBP2	100	65.027	Cavia_porcellus
ENSACIG00000016780	tarbp2	96	66.573	ENSCCAG00000033025	TARBP2	91	92.453	Cebus_capucinus
ENSACIG00000016780	tarbp2	100	64.754	ENSCATG00000026344	TARBP2	94	75.676	Cercocebus_atys
ENSACIG00000016780	tarbp2	100	64.754	ENSCLAG00000009175	TARBP2	100	65.027	Chinchilla_lanigera
ENSACIG00000016780	tarbp2	100	64.481	ENSCSAG00000005479	TARBP2	100	64.481	Chlorocebus_sabaeus
ENSACIG00000016780	tarbp2	100	67.867	ENSCPBG00000000654	TARBP2	100	68.529	Chrysemys_picta_bellii
ENSACIG00000016780	tarbp2	100	64.481	ENSCANG00000040415	TARBP2	91	90.566	Colobus_angolensis_palliatus
ENSACIG00000016780	tarbp2	100	65.479	ENSCGRG00001011856	TARBP2	100	64.658	Cricetulus_griseus_chok1gshd
ENSACIG00000016780	tarbp2	100	65.479	ENSCGRG00000009088	TARBP2	100	65.844	Cricetulus_griseus_crigri
ENSACIG00000016780	tarbp2	100	90.145	ENSCSEG00000010631	tarbp2	100	90.145	Cynoglossus_semilaevis
ENSACIG00000016780	tarbp2	100	88.986	ENSCVAG00000009832	tarbp2	100	88.986	Cyprinodon_variegatus
ENSACIG00000016780	tarbp2	100	83.237	ENSDARG00000070471	tarbp2	100	83.237	Danio_rerio
ENSACIG00000016780	tarbp2	100	65.301	ENSDNOG00000002144	TARBP2	100	63.934	Dasypus_novemcinctus
ENSACIG00000016780	tarbp2	65	71.493	ENSDORG00000001390	Tarbp2	91	71.493	Dipodomys_ordii
ENSACIG00000016780	tarbp2	88	80.612	ENSETEG00000002458	TARBP2	77	77.215	Echinops_telfairi
ENSACIG00000016780	tarbp2	95	59.938	ENSEBUG00000002377	tarbp2	98	60.559	Eptatretus_burgeri
ENSACIG00000016780	tarbp2	100	65.301	ENSEASG00005010030	TARBP2	100	64.754	Equus_asinus_asinus
ENSACIG00000016780	tarbp2	100	68.481	ENSECAG00000011695	TARBP2	94	75.676	Equus_caballus
ENSACIG00000016780	tarbp2	84	63.141	ENSEEUG00000001128	-	99	62.500	Erinaceus_europaeus
ENSACIG00000016780	tarbp2	100	83.523	ENSELUG00000010642	tarbp2	100	86.782	Esox_lucius
ENSACIG00000016780	tarbp2	100	65.301	ENSFCAG00000007757	TARBP2	100	65.301	Felis_catus
ENSACIG00000016780	tarbp2	100	65.301	ENSFDAG00000011932	TARBP2	100	66.803	Fukomys_damarensis
ENSACIG00000016780	tarbp2	94	89.815	ENSFHEG00000016118	tarbp2	100	89.815	Fundulus_heteroclitus
ENSACIG00000016780	tarbp2	100	85.879	ENSGMOG00000001290	tarbp2	100	85.879	Gadus_morhua
ENSACIG00000016780	tarbp2	65	71.689	ENSGALG00000038939	-	83	71.689	Gallus_gallus
ENSACIG00000016780	tarbp2	100	89.275	ENSGAFG00000013341	tarbp2	100	89.275	Gambusia_affinis
ENSACIG00000016780	tarbp2	100	84.123	ENSGACG00000006645	tarbp2	100	86.479	Gasterosteus_aculeatus
ENSACIG00000016780	tarbp2	100	68.144	ENSGAGG00000021169	TARBP2	100	66.759	Gopherus_agassizii
ENSACIG00000016780	tarbp2	96	66.011	ENSGGOG00000012637	TARBP2	81	85.938	Gorilla_gorilla
ENSACIG00000016780	tarbp2	100	96.522	ENSHBUG00000018639	tarbp2	100	96.522	Haplochromis_burtoni
ENSACIG00000016780	tarbp2	100	65.301	ENSHGLG00000001284	TARBP2	100	64.208	Heterocephalus_glaber_female
ENSACIG00000016780	tarbp2	100	65.301	ENSHGLG00100011274	TARBP2	100	64.208	Heterocephalus_glaber_male
ENSACIG00000016780	tarbp2	100	87.536	ENSHCOG00000001027	tarbp2	100	87.536	Hippocampus_comes
ENSACIG00000016780	tarbp2	100	81.948	ENSIPUG00000023701	tarbp2	100	81.924	Ictalurus_punctatus
ENSACIG00000016780	tarbp2	96	67.697	ENSSTOG00000003678	TARBP2	100	67.213	Ictidomys_tridecemlineatus
ENSACIG00000016780	tarbp2	100	91.304	ENSKMAG00000012142	tarbp2	100	91.304	Kryptolebias_marmoratus
ENSACIG00000016780	tarbp2	100	90.395	ENSLBEG00000015027	tarbp2	100	90.395	Labrus_bergylta
ENSACIG00000016780	tarbp2	76	91.228	ENSLACG00000007087	TARBP2	76	91.228	Latimeria_chalumnae
ENSACIG00000016780	tarbp2	100	80.925	ENSLOCG00000005711	tarbp2	100	79.714	Lepisosteus_oculatus
ENSACIG00000016780	tarbp2	72	62.313	ENSLAFG00000002620	TARBP2	73	88.235	Loxodonta_africana
ENSACIG00000016780	tarbp2	100	64.754	ENSMFAG00000013567	TARBP2	94	75.676	Macaca_fascicularis
ENSACIG00000016780	tarbp2	100	65.027	ENSMMUG00000018492	TARBP2	100	64.754	Macaca_mulatta
ENSACIG00000016780	tarbp2	100	64.754	ENSMNEG00000036477	TARBP2	94	75.676	Macaca_nemestrina
ENSACIG00000016780	tarbp2	100	64.943	ENSMLEG00000029583	TARBP2	94	75.676	Mandrillus_leucophaeus
ENSACIG00000016780	tarbp2	95	92.523	ENSMAMG00000010272	tarbp2	92	92.547	Mastacembelus_armatus
ENSACIG00000016780	tarbp2	100	97.101	ENSMZEG00005006895	tarbp2	100	97.101	Maylandia_zebra
ENSACIG00000016780	tarbp2	100	65.205	ENSMAUG00000019805	Tarbp2	100	64.384	Mesocricetus_auratus
ENSACIG00000016780	tarbp2	94	67.536	ENSMICG00000027441	TARBP2	94	75.676	Microcebus_murinus
ENSACIG00000016780	tarbp2	100	65.479	ENSMOCG00000003691	Tarbp2	100	64.110	Microtus_ochrogaster
ENSACIG00000016780	tarbp2	94	88.754	ENSMMOG00000010374	tarbp2	100	88.754	Mola_mola
ENSACIG00000016780	tarbp2	100	93.043	ENSMALG00000009773	tarbp2	100	93.043	Monopterus_albus
ENSACIG00000016780	tarbp2	100	64.932	MGP_CAROLIEiJ_G0020356	Tarbp2	91	92.453	Mus_caroli
ENSACIG00000016780	tarbp2	100	64.932	ENSMUSG00000023051	Tarbp2	91	92.453	Mus_musculus
ENSACIG00000016780	tarbp2	100	64.658	MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	Mus_pahari
ENSACIG00000016780	tarbp2	100	64.932	MGP_SPRETEiJ_G0021249	Tarbp2	91	92.453	Mus_spretus
ENSACIG00000016780	tarbp2	100	65.753	ENSMPUG00000005944	TARBP2	100	64.658	Mustela_putorius_furo
ENSACIG00000016780	tarbp2	100	65.847	ENSMLUG00000010035	TARBP2	100	65.301	Myotis_lucifugus
ENSACIG00000016780	tarbp2	52	92.045	ENSNBRG00000011845	-	84	94.118	Neolamprologus_brichardi
ENSACIG00000016780	tarbp2	100	64.481	ENSNLEG00000017690	TARBP2	94	75.676	Nomascus_leucogenys
ENSACIG00000016780	tarbp2	100	70.000	ENSMEUG00000001916	TARBP2	100	70.000	Notamacropus_eugenii
ENSACIG00000016780	tarbp2	65	71.429	ENSOPRG00000011397	TARBP2	99	71.429	Ochotona_princeps
ENSACIG00000016780	tarbp2	59	68.584	ENSODEG00000013413	TARBP2	100	68.142	Octodon_degus
ENSACIG00000016780	tarbp2	95	91.379	ENSONIG00000005115	tarbp2	96	91.379	Oreochromis_niloticus
ENSACIG00000016780	tarbp2	100	66.940	ENSOCUG00000005700	TARBP2	100	66.667	Oryctolagus_cuniculus
ENSACIG00000016780	tarbp2	100	90.145	ENSORLG00000005209	tarbp2	100	90.145	Oryzias_latipes
ENSACIG00000016780	tarbp2	100	89.855	ENSORLG00020017755	tarbp2	100	89.855	Oryzias_latipes_hni
ENSACIG00000016780	tarbp2	100	90.145	ENSORLG00015013237	tarbp2	100	90.145	Oryzias_latipes_hsok
ENSACIG00000016780	tarbp2	100	90.145	ENSOMEG00000018860	tarbp2	100	90.145	Oryzias_melastigma
ENSACIG00000016780	tarbp2	100	65.312	ENSOGAG00000001744	TARBP2	100	65.405	Otolemur_garnettii
ENSACIG00000016780	tarbp2	100	65.574	ENSOARG00000016437	TARBP2	100	65.301	Ovis_aries
ENSACIG00000016780	tarbp2	100	64.481	ENSPPAG00000030429	TARBP2	94	75.676	Pan_paniscus
ENSACIG00000016780	tarbp2	100	65.301	ENSPPRG00000000189	TARBP2	100	65.301	Panthera_pardus
ENSACIG00000016780	tarbp2	100	67.877	ENSPTIG00000007859	TARBP2	100	67.039	Panthera_tigris_altaica
ENSACIG00000016780	tarbp2	100	64.481	ENSPTRG00000005020	TARBP2	94	75.676	Pan_troglodytes
ENSACIG00000016780	tarbp2	100	64.754	ENSPANG00000010689	TARBP2	94	75.676	Papio_anubis
ENSACIG00000016780	tarbp2	100	77.809	ENSPKIG00000002455	tarbp2	100	77.247	Paramormyrops_kingsleyae
ENSACIG00000016780	tarbp2	100	89.565	ENSPMGG00000006497	tarbp2	100	89.565	Periophthalmus_magnuspinnatus
ENSACIG00000016780	tarbp2	100	64.658	ENSPEMG00000014285	Tarbp2	100	63.836	Peromyscus_maniculatus_bairdii
ENSACIG00000016780	tarbp2	92	63.175	ENSPMAG00000000105	tarbp2	99	63.175	Petromyzon_marinus
ENSACIG00000016780	tarbp2	100	69.706	ENSPCIG00000006672	TARBP2	92	69.617	Phascolarctos_cinereus
ENSACIG00000016780	tarbp2	100	90.145	ENSPFOG00000007586	tarbp2	100	90.145	Poecilia_formosa
ENSACIG00000016780	tarbp2	100	89.855	ENSPLAG00000017659	tarbp2	100	89.855	Poecilia_latipinna
ENSACIG00000016780	tarbp2	100	90.145	ENSPMEG00000007775	tarbp2	100	90.145	Poecilia_mexicana
ENSACIG00000016780	tarbp2	100	89.565	ENSPREG00000007815	tarbp2	100	89.565	Poecilia_reticulata
ENSACIG00000016780	tarbp2	96	66.465	ENSPPYG00000004583	TARBP2	97	67.470	Pongo_abelii
ENSACIG00000016780	tarbp2	65	71.946	ENSPCAG00000005352	TARBP2	60	71.946	Procavia_capensis
ENSACIG00000016780	tarbp2	100	65.847	ENSPCOG00000013102	TARBP2	94	75.676	Propithecus_coquereli
ENSACIG00000016780	tarbp2	100	65.301	ENSPVAG00000012286	TARBP2	82	77.215	Pteropus_vampyrus
ENSACIG00000016780	tarbp2	100	96.812	ENSPNYG00000014125	tarbp2	100	96.812	Pundamilia_nyererei
ENSACIG00000016780	tarbp2	100	83.526	ENSPNAG00000011128	tarbp2	100	83.815	Pygocentrus_nattereri
ENSACIG00000016780	tarbp2	100	64.384	ENSRNOG00000042355	Tarbp2	100	63.562	Rattus_norvegicus
ENSACIG00000016780	tarbp2	100	64.754	ENSRBIG00000027150	TARBP2	94	75.676	Rhinopithecus_bieti
ENSACIG00000016780	tarbp2	100	64.754	ENSRROG00000044783	TARBP2	94	75.676	Rhinopithecus_roxellana
ENSACIG00000016780	tarbp2	100	65.027	ENSSBOG00000027305	TARBP2	94	75.676	Saimiri_boliviensis_boliviensis
ENSACIG00000016780	tarbp2	94	72.414	ENSSHAG00000007064	TARBP2	100	72.414	Sarcophilus_harrisii
ENSACIG00000016780	tarbp2	100	79.666	ENSSFOG00015010784	tarbp2	100	79.330	Scleropages_formosus
ENSACIG00000016780	tarbp2	100	89.744	ENSSMAG00000012769	tarbp2	100	90.598	Scophthalmus_maximus
ENSACIG00000016780	tarbp2	100	94.493	ENSSDUG00000018818	tarbp2	100	94.493	Seriola_dumerili
ENSACIG00000016780	tarbp2	100	94.203	ENSSLDG00000001835	tarbp2	100	94.203	Seriola_lalandi_dorsalis
ENSACIG00000016780	tarbp2	77	67.662	ENSSARG00000001010	TARBP2	72	67.662	Sorex_araneus
ENSACIG00000016780	tarbp2	95	52.469	ENSSPUG00000005895	TARBP2	67	88.136	Sphenodon_punctatus
ENSACIG00000016780	tarbp2	100	94.783	ENSSPAG00000022797	tarbp2	100	94.783	Stegastes_partitus
ENSACIG00000016780	tarbp2	100	65.027	ENSSSCG00000000276	TARBP2	100	65.797	Sus_scrofa
ENSACIG00000016780	tarbp2	70	56.299	ENSTGUG00000017031	TARBP2	100	56.299	Taeniopygia_guttata
ENSACIG00000016780	tarbp2	100	91.594	ENSTRUG00000014379	tarbp2	100	91.594	Takifugu_rubripes
ENSACIG00000016780	tarbp2	100	90.725	ENSTNIG00000007065	tarbp2	100	90.725	Tetraodon_nigroviridis
ENSACIG00000016780	tarbp2	100	65.574	ENSTTRG00000017177	TARBP2	100	65.301	Tursiops_truncatus
ENSACIG00000016780	tarbp2	100	65.301	ENSUAMG00000009011	TARBP2	100	65.301	Ursus_americanus
ENSACIG00000016780	tarbp2	100	64.754	ENSUMAG00000010461	TARBP2	100	64.754	Ursus_maritimus
ENSACIG00000016780	tarbp2	100	64.754	ENSVVUG00000028150	TARBP2	100	66.667	Vulpes_vulpes
ENSACIG00000016780	tarbp2	96	69.477	ENSXETG00000012644	tarbp2	97	69.477	Xenopus_tropicalis
ENSACIG00000016780	tarbp2	100	90.435	ENSXMAG00000017836	tarbp2	100	90.435	Xiphophorus_maculatus