EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000017144 (Gene tree)
Gene ID: -
Gene Symbol: r3hcc1
Alias: si:dkey-191l12.1
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 6886 bases
Position: chrCCOE01001043.1:2167475-2174360
Accession: ZDB-GENE-091204-146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000022070	R3H	PF01424.22	2.1e-10	1	1
ENSACIP00000022119	R3H	PF01424.22	6e-10	1	1
ENSACIP00000022111	R3H	PF01424.22	9.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000022700	-	1311	-	ENSACIP00000022111	436 (aa)	-	-
ENSACIT00000022657	-	444	-	ENSACIP00000022070	147 (aa)	-	-
ENSACIT00000022708	-	978	-	ENSACIP00000022119	325 (aa)	-	-

Gene Model

Click here to download ENSACIG00000017144's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000017144's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000017144	r3hcc1	98	38.788	ENSG00000104679	R3HCC1	100	44.186	Homo_sapiens
ENSACIG00000017144	r3hcc1	99	55.756	ENSAPOG00000003616	r3hcc1	93	55.530	Acanthochromis_polyacanthus
ENSACIG00000017144	r3hcc1	98	30.454	ENSAMEG00000002963	R3HCC1	88	33.043	Ailuropoda_melanoleuca
ENSACIG00000017144	r3hcc1	98	58.916	ENSAOCG00000003945	r3hcc1	100	57.848	Amphiprion_ocellaris
ENSACIG00000017144	r3hcc1	98	58.916	ENSAPEG00000003613	r3hcc1	100	57.848	Amphiprion_percula
ENSACIG00000017144	r3hcc1	92	56.490	ENSATEG00000023860	r3hcc1	100	56.944	Anabas_testudineus
ENSACIG00000017144	r3hcc1	97	38.235	ENSACAG00000016627	R3HCC1	95	34.615	Anolis_carolinensis
ENSACIG00000017144	r3hcc1	99	30.179	ENSANAG00000036169	R3HCC1	97	30.964	Aotus_nancymaae
ENSACIG00000017144	r3hcc1	85	38.095	ENSBTAG00000025830	R3HCC1	93	32.043	Bos_taurus
ENSACIG00000017144	r3hcc1	98	30.753	ENSCJAG00000020118	R3HCC1	96	31.236	Callithrix_jacchus
ENSACIG00000017144	r3hcc1	99	30.316	ENSCHIG00000009107	R3HCC1	97	31.624	Capra_hircus
ENSACIG00000017144	r3hcc1	95	36.875	ENSTSYG00000000511	R3HCC1	75	32.462	Carlito_syrichta
ENSACIG00000017144	r3hcc1	66	35.593	ENSCAPG00000015813	R3HCC1	53	39.216	Cavia_aperea
ENSACIG00000017144	r3hcc1	95	38.125	ENSCPOG00000009696	R3HCC1	98	32.473	Cavia_porcellus
ENSACIG00000017144	r3hcc1	84	37.838	ENSCCAG00000037811	R3HCC1	96	30.964	Cebus_capucinus
ENSACIG00000017144	r3hcc1	98	38.596	ENSCATG00000032971	R3HCC1	96	31.347	Cercocebus_atys
ENSACIG00000017144	r3hcc1	95	37.500	ENSCLAG00000015556	R3HCC1	82	32.468	Chinchilla_lanigera
ENSACIG00000017144	r3hcc1	98	36.905	ENSCSAG00000016250	R3HCC1	89	32.334	Chlorocebus_sabaeus
ENSACIG00000017144	r3hcc1	99	33.262	ENSCHOG00000000396	R3HCC1	93	33.906	Choloepus_hoffmanni
ENSACIG00000017144	r3hcc1	58	50.588	ENSCPBG00000002491	-	51	48.936	Chrysemys_picta_bellii
ENSACIG00000017144	r3hcc1	98	39.394	ENSCANG00000029441	R3HCC1	96	32.898	Colobus_angolensis_palliatus
ENSACIG00000017144	r3hcc1	59	51.724	ENSCGRG00001014977	R3hcc1	97	31.148	Cricetulus_griseus_chok1gshd
ENSACIG00000017144	r3hcc1	59	51.724	ENSCGRG00000004454	R3hcc1	97	31.148	Cricetulus_griseus_crigri
ENSACIG00000017144	r3hcc1	98	53.829	ENSCSEG00000005748	r3hcc1	99	52.349	Cynoglossus_semilaevis
ENSACIG00000017144	r3hcc1	98	57.485	ENSCVAG00000002640	r3hcc1	97	50.382	Cyprinodon_variegatus
ENSACIG00000017144	r3hcc1	99	33.482	ENSDARG00000099593	r3hcc1	99	31.000	Danio_rerio
ENSACIG00000017144	r3hcc1	84	38.194	ENSDNOG00000007168	R3HCC1	59	38.194	Dasypus_novemcinctus
ENSACIG00000017144	r3hcc1	85	38.562	ENSDORG00000026365	R3hcc1	61	43.243	Dipodomys_ordii
ENSACIG00000017144	r3hcc1	84	38.889	ENSEASG00005018782	R3HCC1	78	30.952	Equus_asinus_asinus
ENSACIG00000017144	r3hcc1	84	38.889	ENSECAG00000025013	R3HCC1	95	30.538	Equus_caballus
ENSACIG00000017144	r3hcc1	80	36.691	ENSEEUG00000011918	R3HCC1	92	33.040	Erinaceus_europaeus
ENSACIG00000017144	r3hcc1	95	40.783	ENSELUG00000023650	r3hcc1	100	40.596	Esox_lucius
ENSACIG00000017144	r3hcc1	98	32.104	ENSFCAG00000012395	R3HCC1	93	33.043	Felis_catus
ENSACIG00000017144	r3hcc1	90	39.216	ENSFALG00000001646	R3HCC1	50	38.182	Ficedula_albicollis
ENSACIG00000017144	r3hcc1	84	41.007	ENSFDAG00000001572	R3HCC1	97	32.898	Fukomys_damarensis
ENSACIG00000017144	r3hcc1	87	52.113	ENSGMOG00000017590	-	98	37.228	Gadus_morhua
ENSACIG00000017144	r3hcc1	98	59.627	ENSGAFG00000008747	-	92	55.333	Gambusia_affinis
ENSACIG00000017144	r3hcc1	99	55.491	ENSGACG00000008447	r3hcc1	95	52.252	Gasterosteus_aculeatus
ENSACIG00000017144	r3hcc1	98	38.788	ENSGGOG00000013817	R3HCC1	96	30.208	Gorilla_gorilla
ENSACIG00000017144	r3hcc1	76	89.888	ENSHBUG00000022250	-	90	89.888	Haplochromis_burtoni
ENSACIG00000017144	r3hcc1	95	38.217	ENSHGLG00000010517	R3HCC1	58	42.254	Heterocephalus_glaber_female
ENSACIG00000017144	r3hcc1	95	38.217	ENSHGLG00100006388	R3HCC1	58	42.254	Heterocephalus_glaber_male
ENSACIG00000017144	r3hcc1	99	56.173	ENSHCOG00000011745	r3hcc1	93	46.756	Hippocampus_comes
ENSACIG00000017144	r3hcc1	99	41.441	ENSIPUG00000024504	r3hcc1	87	41.667	Ictalurus_punctatus
ENSACIG00000017144	r3hcc1	98	36.364	ENSSTOG00000027130	R3HCC1	63	41.176	Ictidomys_tridecemlineatus
ENSACIG00000017144	r3hcc1	84	37.671	ENSJJAG00000013075	R3hcc1	97	33.477	Jaculus_jaculus
ENSACIG00000017144	r3hcc1	95	52.804	ENSKMAG00000000286	r3hcc1	100	52.570	Kryptolebias_marmoratus
ENSACIG00000017144	r3hcc1	84	42.963	ENSLACG00000011894	R3HCC1	62	42.754	Latimeria_chalumnae
ENSACIG00000017144	r3hcc1	100	41.279	ENSLOCG00000015442	r3hcc1	94	40.879	Lepisosteus_oculatus
ENSACIG00000017144	r3hcc1	59	50.575	ENSLAFG00000016137	R3HCC1	58	40.441	Loxodonta_africana
ENSACIG00000017144	r3hcc1	98	38.596	ENSMFAG00000032894	R3HCC1	96	32.283	Macaca_fascicularis
ENSACIG00000017144	r3hcc1	98	38.596	ENSMMUG00000016655	R3HCC1	96	31.378	Macaca_mulatta
ENSACIG00000017144	r3hcc1	98	38.596	ENSMNEG00000043283	R3HCC1	96	32.105	Macaca_nemestrina
ENSACIG00000017144	r3hcc1	98	38.596	ENSMLEG00000030147	R3HCC1	96	32.546	Mandrillus_leucophaeus
ENSACIG00000017144	r3hcc1	95	56.308	ENSMAMG00000018146	r3hcc1	100	56.308	Mastacembelus_armatus
ENSACIG00000017144	r3hcc1	98	30.024	ENSMGAG00000001356	R3HCC1	89	30.024	Meleagris_gallopavo
ENSACIG00000017144	r3hcc1	84	39.583	ENSMAUG00000016096	R3hcc1	61	43.750	Mesocricetus_auratus
ENSACIG00000017144	r3hcc1	95	37.423	ENSMICG00000011146	R3HCC1	96	30.769	Microcebus_murinus
ENSACIG00000017144	r3hcc1	81	41.259	ENSMOCG00000018508	R3hcc1	65	41.259	Microtus_ochrogaster
ENSACIG00000017144	r3hcc1	95	53.075	ENSMALG00000000731	r3hcc1	100	54.545	Monopterus_albus
ENSACIG00000017144	r3hcc1	84	38.356	MGP_CAROLIEiJ_G0019467	R3hcc1	58	41.781	Mus_caroli
ENSACIG00000017144	r3hcc1	84	38.356	ENSMUSG00000034194	R3hcc1	97	30.672	Mus_musculus
ENSACIG00000017144	r3hcc1	84	39.865	MGP_PahariEiJ_G0030484	R3hcc1	59	41.667	Mus_pahari
ENSACIG00000017144	r3hcc1	84	38.356	MGP_SPRETEiJ_G0020359	R3hcc1	58	41.781	Mus_spretus
ENSACIG00000017144	r3hcc1	84	38.667	ENSMLUG00000000266	R3HCC1	89	30.937	Myotis_lucifugus
ENSACIG00000017144	r3hcc1	84	39.583	ENSNGAG00000016747	R3hcc1	97	33.191	Nannospalax_galili
ENSACIG00000017144	r3hcc1	99	65.517	ENSNBRG00000016975	-	83	90.909	Neolamprologus_brichardi
ENSACIG00000017144	r3hcc1	90	41.667	ENSNLEG00000015944	R3HCC1	77	32.187	Nomascus_leucogenys
ENSACIG00000017144	r3hcc1	99	32.120	ENSMEUG00000010587	R3HCC1	97	32.692	Notamacropus_eugenii
ENSACIG00000017144	r3hcc1	84	38.356	ENSOPRG00000013390	R3HCC1	64	43.056	Ochotona_princeps
ENSACIG00000017144	r3hcc1	84	39.583	ENSODEG00000007529	R3HCC1	69	41.667	Octodon_degus
ENSACIG00000017144	r3hcc1	86	39.456	ENSOANG00000013877	R3HCC1	62	39.855	Ornithorhynchus_anatinus
ENSACIG00000017144	r3hcc1	99	35.329	ENSOCUG00000023554	R3HCC1	59	41.045	Oryctolagus_cuniculus
ENSACIG00000017144	r3hcc1	95	43.155	ENSORLG00000016816	r3hcc1	100	43.155	Oryzias_latipes
ENSACIG00000017144	r3hcc1	95	43.823	ENSORLG00020012005	r3hcc1	100	43.823	Oryzias_latipes_hni
ENSACIG00000017144	r3hcc1	95	44.056	ENSORLG00015007018	r3hcc1	99	44.262	Oryzias_latipes_hsok
ENSACIG00000017144	r3hcc1	95	45.116	ENSOMEG00000000816	r3hcc1	100	45.116	Oryzias_melastigma
ENSACIG00000017144	r3hcc1	93	36.585	ENSOGAG00000001291	R3HCC1	89	31.373	Otolemur_garnettii
ENSACIG00000017144	r3hcc1	99	32.906	ENSOARG00000010146	R3HCC1	94	33.978	Ovis_aries
ENSACIG00000017144	r3hcc1	98	38.788	ENSPPAG00000033165	R3HCC1	97	32.627	Pan_paniscus
ENSACIG00000017144	r3hcc1	98	31.887	ENSPPRG00000002522	R3HCC1	97	32.826	Panthera_pardus
ENSACIG00000017144	r3hcc1	90	31.604	ENSPTIG00000011230	R3HCC1	92	32.624	Panthera_tigris_altaica
ENSACIG00000017144	r3hcc1	98	38.788	ENSPTRG00000020076	R3HCC1	89	32.627	Pan_troglodytes
ENSACIG00000017144	r3hcc1	98	38.596	ENSPANG00000000453	R3HCC1	96	32.105	Papio_anubis
ENSACIG00000017144	r3hcc1	91	37.143	ENSPKIG00000020397	-	95	37.081	Paramormyrops_kingsleyae
ENSACIG00000017144	r3hcc1	88	36.901	ENSPKIG00000014426	-	95	36.901	Paramormyrops_kingsleyae
ENSACIG00000017144	r3hcc1	98	33.406	ENSPSIG00000017664	R3HCC1	96	33.693	Pelodiscus_sinensis
ENSACIG00000017144	r3hcc1	83	51.639	ENSPMGG00000007792	r3hcc1	99	37.778	Periophthalmus_magnuspinnatus
ENSACIG00000017144	r3hcc1	84	40.278	ENSPEMG00000007118	R3hcc1	59	42.466	Peromyscus_maniculatus_bairdii
ENSACIG00000017144	r3hcc1	60	39.815	ENSPCIG00000022718	-	52	42.857	Phascolarctos_cinereus
ENSACIG00000017144	r3hcc1	98	62.112	ENSPFOG00000022301	r3hcc1	92	53.556	Poecilia_formosa
ENSACIG00000017144	r3hcc1	98	62.112	ENSPLAG00000010794	r3hcc1	92	53.778	Poecilia_latipinna
ENSACIG00000017144	r3hcc1	98	62.112	ENSPMEG00000022515	r3hcc1	92	53.556	Poecilia_mexicana
ENSACIG00000017144	r3hcc1	98	60.248	ENSPREG00000000713	r3hcc1	92	53.778	Poecilia_reticulata
ENSACIG00000017144	r3hcc1	65	41.176	ENSPPYG00000018436	R3HCC1	96	30.892	Pongo_abelii
ENSACIG00000017144	r3hcc1	84	38.621	ENSPCAG00000012229	R3HCC1	61	43.066	Procavia_capensis
ENSACIG00000017144	r3hcc1	95	37.423	ENSPCOG00000027554	R3HCC1	97	32.823	Propithecus_coquereli
ENSACIG00000017144	r3hcc1	99	31.102	ENSPVAG00000009829	R3HCC1	94	31.250	Pteropus_vampyrus
ENSACIG00000017144	r3hcc1	82	54.545	ENSPNAG00000023875	r3hcc1	99	40.233	Pygocentrus_nattereri
ENSACIG00000017144	r3hcc1	98	39.394	ENSRBIG00000028045	R3HCC1	97	32.906	Rhinopithecus_bieti
ENSACIG00000017144	r3hcc1	98	39.394	ENSRROG00000031126	R3HCC1	96	32.637	Rhinopithecus_roxellana
ENSACIG00000017144	r3hcc1	90	39.103	ENSSBOG00000022590	R3HCC1	97	32.533	Saimiri_boliviensis_boliviensis
ENSACIG00000017144	r3hcc1	67	42.105	ENSSHAG00000016526	-	55	43.103	Sarcophilus_harrisii
ENSACIG00000017144	r3hcc1	100	38.525	ENSSFOG00015013507	r3hcc1	82	64.368	Scleropages_formosus
ENSACIG00000017144	r3hcc1	95	57.541	ENSSMAG00000008647	r3hcc1	100	57.541	Scophthalmus_maximus
ENSACIG00000017144	r3hcc1	95	68.590	ENSSDUG00000022786	r3hcc1	99	63.415	Seriola_dumerili
ENSACIG00000017144	r3hcc1	100	63.858	ENSSLDG00000019031	r3hcc1	99	63.858	Seriola_lalandi_dorsalis
ENSACIG00000017144	r3hcc1	58	50.588	ENSSPUG00000012520	-	77	44.915	Sphenodon_punctatus
ENSACIG00000017144	r3hcc1	98	57.562	ENSSPAG00000013497	r3hcc1	100	56.951	Stegastes_partitus
ENSACIG00000017144	r3hcc1	84	38.889	ENSSSCG00000039915	-	90	30.472	Sus_scrofa
ENSACIG00000017144	r3hcc1	93	54.730	ENSTRUG00000015880	r3hcc1	99	45.309	Takifugu_rubripes
ENSACIG00000017144	r3hcc1	82	40.411	ENSTTRG00000012247	R3HCC1	93	31.935	Tursiops_truncatus
ENSACIG00000017144	r3hcc1	79	43.939	ENSUAMG00000007344	R3HCC1	96	32.397	Ursus_americanus
ENSACIG00000017144	r3hcc1	96	50.926	ENSXCOG00000017626	r3hcc1	90	50.926	Xiphophorus_couchianus
ENSACIG00000017144	r3hcc1	98	59.627	ENSXMAG00000018375	r3hcc1	92	54.889	Xiphophorus_maculatus