EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000017298 (Gene tree)
Gene ID: -
Gene Symbol: sall4
Alias: cb372|cb614|ik:tdsubc_2c1|sb:cb372|sb:cb614|wu:fa01g03|xx:tdsubc_2c1
Full Name: spalt-like transcription factor 4
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 5578 bases
Position: chrCCOE01000667.1:3885293-3890870
Accession: ZDB-GENE-060328-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000022258	zf-C2H2	PF00096.26	6.1e-33	1	6
ENSACIP00000022258	zf-C2H2	PF00096.26	6.1e-33	2	6
ENSACIP00000022258	zf-C2H2	PF00096.26	6.1e-33	3	6
ENSACIP00000022258	zf-C2H2	PF00096.26	6.1e-33	4	6
ENSACIP00000022258	zf-C2H2	PF00096.26	6.1e-33	5	6
ENSACIP00000022258	zf-C2H2	PF00096.26	6.1e-33	6	6
ENSACIP00000022258	zf-met	PF12874.7	1.2e-14	1	3
ENSACIP00000022258	zf-met	PF12874.7	1.2e-14	2	3
ENSACIP00000022258	zf-met	PF12874.7	1.2e-14	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000022849	-	3252	-	ENSACIP00000022258	1083 (aa)	-	-

Gene Model

Click here to download ENSACIG00000017298's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000017298's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000017298	sall4	60	45.955	ENSACIG00000014041	sall3a	99	43.929
ENSACIG00000017298	sall4	93	60.000	ENSACIG00000004231	sall1a	100	55.122
ENSACIG00000017298	sall4	72	65.385	ENSACIG00000019407	sall3b	99	65.385
ENSACIG00000017298	sall4	54	48.000	ENSACIG00000004666	-	92	50.943
ENSACIG00000017298	sall4	61	51.020	ENSACIG00000003515	-	83	54.386
ENSACIG00000017298	sall4	62	51.020	ENSACIG00000017050	-	97	56.250
ENSACIG00000017298	sall4	57	56.604	ENSACIG00000013604	-	75	56.604
ENSACIG00000017298	sall4	55	49.057	ENSACIG00000019791	-	93	49.057
ENSACIG00000017298	sall4	68	53.061	ENSACIG00000014123	znf236	74	53.061
ENSACIG00000017298	sall4	55	42.593	ENSACIG00000000406	prdm5	68	42.593
ENSACIG00000017298	sall4	56	49.057	ENSACIG00000010647	-	100	54.717
ENSACIG00000017298	sall4	58	52.830	ENSACIG00000022293	-	92	53.061

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000017298	sall4	100	42.907	ENSG00000101115	SALL4	100	59.615	Homo_sapiens
ENSACIG00000017298	sall4	100	80.018	ENSAPOG00000002465	sall4	100	80.018	Acanthochromis_polyacanthus
ENSACIG00000017298	sall4	100	43.766	ENSAMEG00000013250	-	99	45.055	Ailuropoda_melanoleuca
ENSACIG00000017298	sall4	100	80.203	ENSAOCG00000023678	sall4	100	80.203	Amphiprion_ocellaris
ENSACIG00000017298	sall4	100	80.571	ENSAPEG00000000751	sall4	100	80.571	Amphiprion_percula
ENSACIG00000017298	sall4	100	81.084	ENSATEG00000024480	sall4	100	81.084	Anabas_testudineus
ENSACIG00000017298	sall4	99	51.536	ENSAPLG00000006498	SALL4	100	52.074	Anas_platyrhynchos
ENSACIG00000017298	sall4	100	51.829	ENSACAG00000012748	SALL4	100	52.000	Anolis_carolinensis
ENSACIG00000017298	sall4	100	42.380	ENSANAG00000023352	SALL4	90	67.308	Aotus_nancymaae
ENSACIG00000017298	sall4	100	88.284	ENSACLG00000017851	sall4	100	88.284	Astatotilapia_calliptera
ENSACIG00000017298	sall4	99	62.511	ENSAMXG00000001254	sall4	99	62.956	Astyanax_mexicanus
ENSACIG00000017298	sall4	100	41.860	ENSBTAG00000003101	SALL4	100	42.132	Bos_taurus
ENSACIG00000017298	sall4	80	45.193	ENSCJAG00000000591	SALL4	97	45.193	Callithrix_jacchus
ENSACIG00000017298	sall4	100	43.799	ENSCAFG00000011738	-	100	43.799	Canis_familiaris
ENSACIG00000017298	sall4	100	43.913	ENSCAFG00020021870	SALL4	100	43.913	Canis_lupus_dingo
ENSACIG00000017298	sall4	100	41.524	ENSCHIG00000026270	SALL4	100	42.105	Capra_hircus
ENSACIG00000017298	sall4	100	42.469	ENSTSYG00000007359	SALL4	100	61.538	Carlito_syrichta
ENSACIG00000017298	sall4	99	41.526	ENSCAPG00000012135	SALL4	98	41.844	Cavia_aperea
ENSACIG00000017298	sall4	100	39.363	ENSCCAG00000029512	-	100	58.824	Cebus_capucinus
ENSACIG00000017298	sall4	100	42.907	ENSCATG00000030757	SALL4	91	67.308	Cercocebus_atys
ENSACIG00000017298	sall4	100	42.583	ENSCLAG00000010479	SALL4	91	65.385	Chinchilla_lanigera
ENSACIG00000017298	sall4	100	42.820	ENSCSAG00000015269	SALL4	100	43.018	Chlorocebus_sabaeus
ENSACIG00000017298	sall4	99	51.150	ENSCPBG00000014995	SALL4	99	51.471	Chrysemys_picta_bellii
ENSACIG00000017298	sall4	100	43.354	ENSCANG00000036463	SALL4	100	43.625	Colobus_angolensis_palliatus
ENSACIG00000017298	sall4	61	56.863	ENSCGRG00001019569	Sall4	100	56.863	Cricetulus_griseus_chok1gshd
ENSACIG00000017298	sall4	61	56.863	ENSCGRG00000000462	Sall4	93	74.074	Cricetulus_griseus_crigri
ENSACIG00000017298	sall4	100	76.895	ENSCSEG00000014604	sall4	100	76.986	Cynoglossus_semilaevis
ENSACIG00000017298	sall4	100	76.888	ENSCVAG00000010815	sall4	100	76.888	Cyprinodon_variegatus
ENSACIG00000017298	sall4	99	62.715	ENSDARG00000044485	sall4	99	62.715	Danio_rerio
ENSACIG00000017298	sall4	100	43.399	ENSDNOG00000040633	SALL4	100	43.745	Dasypus_novemcinctus
ENSACIG00000017298	sall4	100	40.603	ENSDORG00000012841	Sall4	100	75.676	Dipodomys_ordii
ENSACIG00000017298	sall4	75	65.385	ENSETEG00000012475	-	63	65.385	Echinops_telfairi
ENSACIG00000017298	sall4	100	43.745	ENSECAG00000018533	SALL4	100	43.658	Equus_caballus
ENSACIG00000017298	sall4	100	43.118	ENSEEUG00000003649	SALL4	99	41.899	Erinaceus_europaeus
ENSACIG00000017298	sall4	100	64.184	ENSELUG00000005696	sall4	100	64.184	Esox_lucius
ENSACIG00000017298	sall4	100	43.493	ENSFCAG00000002822	SALL4	86	67.308	Felis_catus
ENSACIG00000017298	sall4	100	50.965	ENSFALG00000013149	SALL4	100	51.986	Ficedula_albicollis
ENSACIG00000017298	sall4	100	42.570	ENSFDAG00000017812	SALL4	91	63.462	Fukomys_damarensis
ENSACIG00000017298	sall4	100	76.562	ENSFHEG00000014187	sall4	100	76.562	Fundulus_heteroclitus
ENSACIG00000017298	sall4	100	68.824	ENSGMOG00000003822	sall4	100	68.824	Gadus_morhua
ENSACIG00000017298	sall4	100	51.449	ENSGALG00000041365	SALL4	100	52.124	Gallus_gallus
ENSACIG00000017298	sall4	100	77.001	ENSGAFG00000019925	sall4	100	77.001	Gambusia_affinis
ENSACIG00000017298	sall4	100	75.160	ENSGACG00000011124	sall4	100	75.160	Gasterosteus_aculeatus
ENSACIG00000017298	sall4	99	51.011	ENSGAGG00000002297	SALL4	99	51.230	Gopherus_agassizii
ENSACIG00000017298	sall4	100	42.820	ENSGGOG00000001832	SALL4	90	67.308	Gorilla_gorilla
ENSACIG00000017298	sall4	100	88.192	ENSHBUG00000007327	sall4	100	88.192	Haplochromis_burtoni
ENSACIG00000017298	sall4	98	42.663	ENSHGLG00000009043	SALL4	96	42.663	Heterocephalus_glaber_female
ENSACIG00000017298	sall4	98	42.663	ENSHGLG00100002722	SALL4	96	42.702	Heterocephalus_glaber_male
ENSACIG00000017298	sall4	100	76.422	ENSHCOG00000008519	sall4	100	76.422	Hippocampus_comes
ENSACIG00000017298	sall4	99	62.829	ENSIPUG00000019170	sall4	99	63.010	Ictalurus_punctatus
ENSACIG00000017298	sall4	65	60.784	ENSSTOG00000025002	SALL4	93	78.873	Ictidomys_tridecemlineatus
ENSACIG00000017298	sall4	100	41.964	ENSJJAG00000020688	Sall4	93	80.282	Jaculus_jaculus
ENSACIG00000017298	sall4	100	78.177	ENSKMAG00000002501	sall4	100	78.821	Kryptolebias_marmoratus
ENSACIG00000017298	sall4	100	77.177	ENSLBEG00000019951	sall4	100	77.177	Labrus_bergylta
ENSACIG00000017298	sall4	96	48.330	ENSLACG00000013898	SALL4	99	62.921	Latimeria_chalumnae
ENSACIG00000017298	sall4	100	61.991	ENSLOCG00000002427	sall4	100	61.991	Lepisosteus_oculatus
ENSACIG00000017298	sall4	100	43.467	ENSLAFG00000004309	SALL4	100	43.467	Loxodonta_africana
ENSACIG00000017298	sall4	100	42.907	ENSMFAG00000027169	SALL4	100	43.539	Macaca_fascicularis
ENSACIG00000017298	sall4	87	44.888	ENSMMUG00000003870	SALL4	100	60.784	Macaca_mulatta
ENSACIG00000017298	sall4	87	44.888	ENSMNEG00000035995	SALL4	91	67.308	Macaca_nemestrina
ENSACIG00000017298	sall4	100	42.994	ENSMLEG00000030467	SALL4	100	43.192	Mandrillus_leucophaeus
ENSACIG00000017298	sall4	100	79.727	ENSMAMG00000005223	sall4	100	79.818	Mastacembelus_armatus
ENSACIG00000017298	sall4	100	88.192	ENSMZEG00005023418	sall4	100	88.192	Maylandia_zebra
ENSACIG00000017298	sall4	76	64.706	ENSMGAG00000009344	SALL4	100	64.706	Meleagris_gallopavo
ENSACIG00000017298	sall4	100	41.278	ENSMAUG00000015814	Sall4	93	71.084	Mesocricetus_auratus
ENSACIG00000017298	sall4	100	43.018	ENSMICG00000000027	SALL4	86	67.308	Microcebus_murinus
ENSACIG00000017298	sall4	100	41.927	ENSMOCG00000018245	Sall4	93	78.082	Microtus_ochrogaster
ENSACIG00000017298	sall4	100	77.177	ENSMMOG00000014929	sall4	100	77.452	Mola_mola
ENSACIG00000017298	sall4	99	46.009	ENSMODG00000016387	SALL4	97	46.524	Monodelphis_domestica
ENSACIG00000017298	sall4	100	81.451	ENSMALG00000018709	sall4	100	81.966	Monopterus_albus
ENSACIG00000017298	sall4	100	41.788	MGP_CAROLIEiJ_G0024723	Sall4	93	80.556	Mus_caroli
ENSACIG00000017298	sall4	100	41.724	ENSMUSG00000027547	Sall4	93	80.556	Mus_musculus
ENSACIG00000017298	sall4	100	40.136	MGP_PahariEiJ_G0026164	Sall4	93	80.556	Mus_pahari
ENSACIG00000017298	sall4	100	41.724	MGP_SPRETEiJ_G0025643	Sall4	93	80.556	Mus_spretus
ENSACIG00000017298	sall4	100	42.820	ENSMPUG00000017543	SALL4	96	42.980	Mustela_putorius_furo
ENSACIG00000017298	sall4	100	41.155	ENSMLUG00000008405	-	100	41.155	Myotis_lucifugus
ENSACIG00000017298	sall4	98	43.348	ENSMLUG00000007060	-	99	43.258	Myotis_lucifugus
ENSACIG00000017298	sall4	99	34.574	ENSMLUG00000028073	-	99	34.517	Myotis_lucifugus
ENSACIG00000017298	sall4	100	42.390	ENSNGAG00000017833	Sall4	88	67.308	Nannospalax_galili
ENSACIG00000017298	sall4	100	88.643	ENSNBRG00000001829	sall4	100	88.643	Neolamprologus_brichardi
ENSACIG00000017298	sall4	100	42.733	ENSNLEG00000007013	SALL4	100	43.316	Nomascus_leucogenys
ENSACIG00000017298	sall4	90	53.333	ENSMEUG00000005793	-	99	53.333	Notamacropus_eugenii
ENSACIG00000017298	sall4	100	43.217	ENSOPRG00000011640	SALL4	100	43.217	Ochotona_princeps
ENSACIG00000017298	sall4	100	89.852	ENSONIG00000016557	sall4	100	89.852	Oreochromis_niloticus
ENSACIG00000017298	sall4	99	51.862	ENSOANG00000008667	SALL4	97	52.478	Ornithorhynchus_anatinus
ENSACIG00000017298	sall4	97	43.687	ENSOCUG00000011797	SALL4	98	43.687	Oryctolagus_cuniculus
ENSACIG00000017298	sall4	100	74.609	ENSORLG00000016130	sall4	100	75.253	Oryzias_latipes
ENSACIG00000017298	sall4	100	74.517	ENSORLG00020007339	sall4	100	75.161	Oryzias_latipes_hni
ENSACIG00000017298	sall4	100	74.517	ENSORLG00015002265	sall4	100	75.161	Oryzias_latipes_hsok
ENSACIG00000017298	sall4	100	75.322	ENSOMEG00000017344	sall4	100	75.967	Oryzias_melastigma
ENSACIG00000017298	sall4	97	44.475	ENSOGAG00000013799	SALL4	99	44.475	Otolemur_garnettii
ENSACIG00000017298	sall4	100	40.262	ENSOARG00000014570	SALL4	100	40.349	Ovis_aries
ENSACIG00000017298	sall4	100	43.304	ENSPPAG00000038064	SALL4	90	67.308	Pan_paniscus
ENSACIG00000017298	sall4	100	43.761	ENSPPRG00000008677	SALL4	86	67.308	Panthera_pardus
ENSACIG00000017298	sall4	100	42.820	ENSPTRG00000013631	SALL4	90	67.308	Pan_troglodytes
ENSACIG00000017298	sall4	87	44.888	ENSPANG00000021792	SALL4	91	67.308	Papio_anubis
ENSACIG00000017298	sall4	100	62.138	ENSPKIG00000007074	sall4	100	62.285	Paramormyrops_kingsleyae
ENSACIG00000017298	sall4	99	51.585	ENSPSIG00000009066	SALL4	99	51.630	Pelodiscus_sinensis
ENSACIG00000017298	sall4	100	67.403	ENSPMGG00000022551	sall4	100	67.680	Periophthalmus_magnuspinnatus
ENSACIG00000017298	sall4	100	41.176	ENSPEMG00000022706	Sall4	93	80.556	Peromyscus_maniculatus_bairdii
ENSACIG00000017298	sall4	99	49.215	ENSPCIG00000022838	SALL4	97	49.434	Phascolarctos_cinereus
ENSACIG00000017298	sall4	100	76.541	ENSPFOG00000001442	sall4	100	76.541	Poecilia_formosa
ENSACIG00000017298	sall4	100	76.449	ENSPLAG00000008760	sall4	100	76.449	Poecilia_latipinna
ENSACIG00000017298	sall4	100	76.541	ENSPMEG00000008497	sall4	100	76.541	Poecilia_mexicana
ENSACIG00000017298	sall4	100	75.989	ENSPREG00000021140	sall4	100	75.989	Poecilia_reticulata
ENSACIG00000017298	sall4	100	42.784	ENSPPYG00000011138	SALL4	100	42.869	Pongo_abelii
ENSACIG00000017298	sall4	100	40.555	ENSPCAG00000004726	SALL4	99	40.890	Procavia_capensis
ENSACIG00000017298	sall4	100	42.994	ENSPCOG00000016321	SALL4	85	67.308	Propithecus_coquereli
ENSACIG00000017298	sall4	94	42.672	ENSPVAG00000002075	SALL4	94	42.672	Pteropus_vampyrus
ENSACIG00000017298	sall4	100	87.996	ENSPNYG00000021738	sall4	100	87.996	Pundamilia_nyererei
ENSACIG00000017298	sall4	99	63.809	ENSPNAG00000020929	sall4	99	63.989	Pygocentrus_nattereri
ENSACIG00000017298	sall4	100	41.258	ENSRNOG00000050035	Sall4	87	65.385	Rattus_norvegicus
ENSACIG00000017298	sall4	100	42.994	ENSRBIG00000039876	SALL4	100	43.192	Rhinopithecus_bieti
ENSACIG00000017298	sall4	100	42.994	ENSRROG00000036585	SALL4	100	43.192	Rhinopithecus_roxellana
ENSACIG00000017298	sall4	100	42.685	ENSSBOG00000030011	SALL4	85	67.308	Saimiri_boliviensis_boliviensis
ENSACIG00000017298	sall4	99	65.385	ENSSHAG00000018013	SALL4	90	65.385	Sarcophilus_harrisii
ENSACIG00000017298	sall4	100	62.331	ENSSFOG00015021075	sall4	100	62.635	Scleropages_formosus
ENSACIG00000017298	sall4	100	79.506	ENSSMAG00000019218	sall4	99	79.780	Scophthalmus_maximus
ENSACIG00000017298	sall4	100	82.676	ENSSDUG00000004657	sall4	100	82.951	Seriola_dumerili
ENSACIG00000017298	sall4	100	82.218	ENSSLDG00000004973	sall4	100	82.493	Seriola_lalandi_dorsalis
ENSACIG00000017298	sall4	100	81.860	ENSSPAG00000001978	sall4	100	81.860	Stegastes_partitus
ENSACIG00000017298	sall4	100	42.124	ENSSSCG00000007479	SALL4	100	42.137	Sus_scrofa
ENSACIG00000017298	sall4	100	75.390	ENSTRUG00000007410	sall4	100	75.390	Takifugu_rubripes
ENSACIG00000017298	sall4	100	74.357	ENSTNIG00000012460	sall4	100	74.632	Tetraodon_nigroviridis
ENSACIG00000017298	sall4	98	41.941	ENSTTRG00000007753	SALL4	99	41.903	Tursiops_truncatus
ENSACIG00000017298	sall4	100	43.782	ENSUAMG00000010113	SALL4	100	43.782	Ursus_americanus
ENSACIG00000017298	sall4	98	43.587	ENSUMAG00000024274	SALL4	99	43.677	Ursus_maritimus
ENSACIG00000017298	sall4	100	49.336	ENSXETG00000012326	sall4	100	49.336	Xenopus_tropicalis
ENSACIG00000017298	sall4	100	69.450	ENSXCOG00000015467	sall4	100	69.450	Xiphophorus_couchianus
ENSACIG00000017298	sall4	100	69.069	ENSXMAG00000012692	sall4	100	69.069	Xiphophorus_maculatus