EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000017309 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 4954 bases
Position: chrCCOE01001115.1:5501-10454
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000022265	G-patch	PF01585.23	5.6e-10	1	1
ENSACIP00000022274	G-patch	PF01585.23	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000022856	-	363	-	ENSACIP00000022265	120 (aa)	-	-
ENSACIT00000022865	-	522	-	ENSACIP00000022274	173 (aa)	-	-

Gene Model

Click here to download ENSACIG00000017309's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000017309's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000017309	-	73	54.545	ENSG00000160818	GPATCH4	87	48.113	Homo_sapiens
ENSACIG00000017309	-	63	77.632	ENSAMXG00000034049	gpatch4	52	64.286	Astyanax_mexicanus
ENSACIG00000017309	-	69	48.810	ENSCJAG00000001883	-	85	42.453	Callithrix_jacchus
ENSACIG00000017309	-	69	55.952	ENSCJAG00000006048	GPATCH4	85	48.113	Callithrix_jacchus
ENSACIG00000017309	-	69	52.381	ENSCJAG00000031662	-	69	46.078	Callithrix_jacchus
ENSACIG00000017309	-	66	55.000	ENSCAFG00020006707	-	90	45.045	Canis_lupus_dingo
ENSACIG00000017309	-	66	57.500	ENSCAFG00020005274	-	96	43.902	Canis_lupus_dingo
ENSACIG00000017309	-	65	56.962	ENSTSYG00000026904	-	56	56.962	Carlito_syrichta
ENSACIG00000017309	-	65	55.696	ENSCPOG00000013701	-	89	47.170	Cavia_porcellus
ENSACIG00000017309	-	69	55.952	ENSCCAG00000036114	GPATCH4	85	48.113	Cebus_capucinus
ENSACIG00000017309	-	89	47.706	ENSCATG00000042152	GPATCH4	89	45.385	Cercocebus_atys
ENSACIG00000017309	-	86	49.038	ENSCANG00000030031	GPATCH4	89	43.411	Colobus_angolensis_palliatus
ENSACIG00000017309	-	91	67.568	ENSDARG00000091931	gpatch4	59	67.257	Danio_rerio
ENSACIG00000017309	-	73	54.023	ENSDORG00000011332	-	58	54.023	Dipodomys_ordii
ENSACIG00000017309	-	69	55.952	ENSGGOG00000000753	GPATCH4	89	43.411	Gorilla_gorilla
ENSACIG00000017309	-	65	56.962	ENSHGLG00000011346	-	81	43.220	Heterocephalus_glaber_female
ENSACIG00000017309	-	65	56.962	ENSHGLG00100018277	-	81	43.220	Heterocephalus_glaber_male
ENSACIG00000017309	-	91	67.568	ENSIPUG00000006348	gpatch4	50	57.857	Ictalurus_punctatus
ENSACIG00000017309	-	85	50.485	ENSSTOG00000020510	GPATCH4	79	50.485	Ictidomys_tridecemlineatus
ENSACIG00000017309	-	69	55.952	ENSMFAG00000030965	GPATCH4	89	43.411	Macaca_fascicularis
ENSACIG00000017309	-	73	54.545	ENSMMUG00000002624	GPATCH4	89	43.411	Macaca_mulatta
ENSACIG00000017309	-	69	55.952	ENSMNEG00000028844	GPATCH4	89	43.411	Macaca_nemestrina
ENSACIG00000017309	-	69	54.762	ENSMLEG00000037909	GPATCH4	89	41.860	Mandrillus_leucophaeus
ENSACIG00000017309	-	63	58.442	ENSMAUG00000008406	-	83	50.495	Mesocricetus_auratus
ENSACIG00000017309	-	64	38.393	ENSMICG00000038615	-	54	48.387	Microcebus_murinus
ENSACIG00000017309	-	67	51.250	ENSMICG00000047155	-	80	48.889	Microcebus_murinus
ENSACIG00000017309	-	72	46.067	ENSMICG00000034025	-	77	46.067	Microcebus_murinus
ENSACIG00000017309	-	93	46.087	ENSMOCG00000008875	-	92	46.087	Microtus_ochrogaster
ENSACIG00000017309	-	66	93.671	ENSMMOG00000017095	gpatch4	96	74.038	Mola_mola
ENSACIG00000017309	-	63	59.740	MGP_CAROLIEiJ_G0025152	Gpatch4	51	47.581	Mus_caroli
ENSACIG00000017309	-	63	59.740	ENSMUSG00000028069	Gpatch4	51	47.581	Mus_musculus
ENSACIG00000017309	-	63	59.740	MGP_PahariEiJ_G0026595	-	51	47.581	Mus_pahari
ENSACIG00000017309	-	63	59.740	MGP_SPRETEiJ_G0026093	Gpatch4	51	47.581	Mus_spretus
ENSACIG00000017309	-	63	54.545	ENSNGAG00000019958	-	87	42.982	Nannospalax_galili
ENSACIG00000017309	-	67	45.679	ENSODEG00000016849	-	74	45.679	Octodon_degus
ENSACIG00000017309	-	67	51.250	ENSODEG00000005222	-	76	49.425	Octodon_degus
ENSACIG00000017309	-	85	50.962	ENSODEG00000010437	-	89	49.057	Octodon_degus
ENSACIG00000017309	-	68	86.420	ENSORLG00000016102	-	85	77.174	Oryzias_latipes
ENSACIG00000017309	-	69	55.952	ENSPPAG00000028364	-	89	43.411	Pan_paniscus
ENSACIG00000017309	-	65	56.962	ENSPTIG00000006717	GPATCH4	57	56.250	Panthera_tigris_altaica
ENSACIG00000017309	-	69	55.952	ENSPTRG00000001464	GPATCH4	89	43.411	Pan_troglodytes
ENSACIG00000017309	-	69	55.952	ENSPANG00000018543	GPATCH4	89	43.411	Papio_anubis
ENSACIG00000017309	-	68	79.012	ENSPMGG00000019375	-	57	79.012	Periophthalmus_magnuspinnatus
ENSACIG00000017309	-	65	55.696	ENSPCOG00000023130	-	60	53.409	Propithecus_coquereli
ENSACIG00000017309	-	76	36.567	ENSPCOG00000013948	-	85	38.211	Propithecus_coquereli
ENSACIG00000017309	-	69	55.952	ENSRBIG00000005742	GPATCH4	89	42.636	Rhinopithecus_bieti
ENSACIG00000017309	-	69	55.952	ENSRROG00000044157	GPATCH4	89	42.636	Rhinopithecus_roxellana
ENSACIG00000017309	-	94	61.538	ENSTRUG00000020638	-	83	61.538	Takifugu_rubripes
ENSACIG00000017309	-	65	58.228	ENSVVUG00000006004	-	82	46.847	Vulpes_vulpes
ENSACIG00000017309	-	63	53.333	ENSVVUG00000019904	-	89	44.340	Vulpes_vulpes