EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000017364 (Gene tree)
Gene ID: -
Gene Symbol: zgc:114130
Alias: fb92b09|wu:fb92b09
Full Name: zgc:114130
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 2193 bases
Position: chrCCOE01000346.1:153394-155586
Accession: ZDB-GENE-050913-48
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000022317	zf-CCCH	PF00642.24	1.1e-20	1	2
ENSACIP00000022317	zf-CCCH	PF00642.24	1.1e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000022911	-	1080	-	ENSACIP00000022317	359 (aa)	-	-

Gene Model

Click here to download ENSACIG00000017364's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000017364's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000017364	zgc:114130	99	76.454	ENSAPOG00000014912	zgc:114130	83	74.515	Acanthochromis_polyacanthus
ENSACIG00000017364	zgc:114130	99	75.346	ENSAOCG00000022227	zgc:114130	83	74.238	Amphiprion_ocellaris
ENSACIG00000017364	zgc:114130	99	76.177	ENSAPEG00000015497	zgc:114130	83	75.069	Amphiprion_percula
ENSACIG00000017364	zgc:114130	99	70.411	ENSATEG00000008781	zgc:114130	83	72.877	Anabas_testudineus
ENSACIG00000017364	zgc:114130	98	82.303	ENSACLG00000022113	zgc:114130	82	80.056	Astatotilapia_calliptera
ENSACIG00000017364	zgc:114130	55	42.000	ENSACLG00000022112	zgc:162730	66	38.129	Astatotilapia_calliptera
ENSACIG00000017364	zgc:114130	75	39.259	ENSAMXG00000035945	zgc:162730	68	39.179	Astyanax_mexicanus
ENSACIG00000017364	zgc:114130	75	43.911	ENSAMXG00000036093	zfp36l1a	61	43.494	Astyanax_mexicanus
ENSACIG00000017364	zgc:114130	97	43.014	ENSAMXG00000038581	zgc:114130	80	43.597	Astyanax_mexicanus
ENSACIG00000017364	zgc:114130	70	37.452	ENSCSEG00000018283	zgc:162730	95	33.333	Cynoglossus_semilaevis
ENSACIG00000017364	zgc:114130	99	65.761	ENSCSEG00000018290	zgc:114130	83	65.489	Cynoglossus_semilaevis
ENSACIG00000017364	zgc:114130	96	63.788	ENSCVAG00000018574	zgc:114130	83	62.674	Cyprinodon_variegatus
ENSACIG00000017364	zgc:114130	91	41.390	ENSDARG00000040503	sb:cb81	76	41.390	Danio_rerio
ENSACIG00000017364	zgc:114130	98	48.468	ENSDARG00000040725	zgc:114130	79	49.721	Danio_rerio
ENSACIG00000017364	zgc:114130	97	38.682	ENSELUG00000013045	sb:cb81	61	42.279	Esox_lucius
ENSACIG00000017364	zgc:114130	98	47.397	ENSELUG00000013151	zgc:114130	80	47.645	Esox_lucius
ENSACIG00000017364	zgc:114130	75	44.043	ENSELUG00000021506	zfp36l1a	61	43.262	Esox_lucius
ENSACIG00000017364	zgc:114130	96	64.266	ENSFHEG00000000656	zgc:114130	83	65.651	Fundulus_heteroclitus
ENSACIG00000017364	zgc:114130	74	38.060	ENSGMOG00000017242	zgc:162730	78	38.849	Gadus_morhua
ENSACIG00000017364	zgc:114130	92	56.119	ENSGMOG00000017223	zgc:114130	99	56.716	Gadus_morhua
ENSACIG00000017364	zgc:114130	94	68.222	ENSGAFG00000009949	zgc:114130	92	66.472	Gambusia_affinis
ENSACIG00000017364	zgc:114130	93	72.239	ENSGACG00000008344	zgc:114130	100	69.851	Gasterosteus_aculeatus
ENSACIG00000017364	zgc:114130	83	38.111	ENSGACG00000008351	zgc:162730	98	37.805	Gasterosteus_aculeatus
ENSACIG00000017364	zgc:114130	55	42.000	ENSHBUG00000015057	zgc:162730	66	37.410	Haplochromis_burtoni
ENSACIG00000017364	zgc:114130	98	83.427	ENSHBUG00000015051	zgc:114130	82	80.899	Haplochromis_burtoni
ENSACIG00000017364	zgc:114130	99	63.408	ENSHCOG00000015800	zgc:114130	81	62.079	Hippocampus_comes
ENSACIG00000017364	zgc:114130	54	44.103	ENSHCOG00000000792	sb:cb81	82	34.536	Hippocampus_comes
ENSACIG00000017364	zgc:114130	97	44.602	ENSIPUG00000018256	zgc:114130	67	44.602	Ictalurus_punctatus
ENSACIG00000017364	zgc:114130	74	40.659	ENSJJAG00000017247	Zfp36l1	55	41.079	Jaculus_jaculus
ENSACIG00000017364	zgc:114130	99	70.137	ENSKMAG00000019287	zgc:114130	84	70.137	Kryptolebias_marmoratus
ENSACIG00000017364	zgc:114130	99	66.116	ENSLBEG00000018387	zgc:114130	82	66.391	Labrus_bergylta
ENSACIG00000017364	zgc:114130	75	41.026	ENSLACG00000015967	ZFP36L1	66	40.590	Latimeria_chalumnae
ENSACIG00000017364	zgc:114130	86	40.896	ENSLACG00000015732	sb:cb81	65	45.353	Latimeria_chalumnae
ENSACIG00000017364	zgc:114130	54	45.361	ENSLOCG00000013957	zfp36l1a	61	40.892	Lepisosteus_oculatus
ENSACIG00000017364	zgc:114130	91	42.025	ENSLOCG00000014587	sb:cb81	76	41.194	Lepisosteus_oculatus
ENSACIG00000017364	zgc:114130	99	72.778	ENSMAMG00000007511	zgc:114130	80	70.000	Mastacembelus_armatus
ENSACIG00000017364	zgc:114130	98	82.584	ENSMZEG00005014410	zgc:114130	82	80.056	Maylandia_zebra
ENSACIG00000017364	zgc:114130	67	38.889	ENSMZEG00005014415	zgc:162730	95	33.755	Maylandia_zebra
ENSACIG00000017364	zgc:114130	98	73.446	ENSMMOG00000011504	zgc:114130	96	70.904	Mola_mola
ENSACIG00000017364	zgc:114130	67	35.510	ENSMMOG00000011506	zgc:162730	54	41.985	Mola_mola
ENSACIG00000017364	zgc:114130	75	60.000	ENSMALG00000021140	-	98	61.364	Monopterus_albus
ENSACIG00000017364	zgc:114130	97	76.571	ENSNBRG00000013703	zgc:114130	99	74.000	Neolamprologus_brichardi
ENSACIG00000017364	zgc:114130	55	42.500	ENSNBRG00000013701	zgc:162730	66	38.489	Neolamprologus_brichardi
ENSACIG00000017364	zgc:114130	93	81.065	ENSONIG00000005004	zgc:114130	100	78.107	Oreochromis_niloticus
ENSACIG00000017364	zgc:114130	75	41.877	ENSOMEG00000017752	zgc:162730	64	40.217	Oryzias_melastigma
ENSACIG00000017364	zgc:114130	96	67.606	ENSPFOG00000003653	zgc:114130	99	66.197	Poecilia_formosa
ENSACIG00000017364	zgc:114130	59	42.009	ENSPFOG00000003665	zgc:162730	53	47.333	Poecilia_formosa
ENSACIG00000017364	zgc:114130	96	67.769	ENSPLAG00000000947	zgc:114130	83	66.391	Poecilia_latipinna
ENSACIG00000017364	zgc:114130	96	66.849	ENSPMEG00000015335	zgc:114130	83	65.205	Poecilia_mexicana
ENSACIG00000017364	zgc:114130	96	69.697	ENSPREG00000021254	zgc:114130	83	67.493	Poecilia_reticulata
ENSACIG00000017364	zgc:114130	55	42.000	ENSPNYG00000015553	zgc:162730	66	38.129	Pundamilia_nyererei
ENSACIG00000017364	zgc:114130	98	81.690	ENSPNYG00000015546	zgc:114130	82	80.618	Pundamilia_nyererei
ENSACIG00000017364	zgc:114130	75	42.804	ENSPNAG00000015712	zfp36l1a	62	42.007	Pygocentrus_nattereri
ENSACIG00000017364	zgc:114130	98	38.482	ENSPNAG00000023029	zgc:114130	81	43.011	Pygocentrus_nattereri
ENSACIG00000017364	zgc:114130	76	43.750	ENSPNAG00000030063	sb:cb81	62	42.537	Pygocentrus_nattereri
ENSACIG00000017364	zgc:114130	75	36.803	ENSSFOG00015003179	sb:cb81	57	36.466	Scleropages_formosus
ENSACIG00000017364	zgc:114130	96	70.255	ENSSMAG00000018621	zgc:114130	78	68.555	Scophthalmus_maximus
ENSACIG00000017364	zgc:114130	96	77.273	ENSSDUG00000002237	zgc:114130	82	75.284	Seriola_dumerili
ENSACIG00000017364	zgc:114130	96	77.208	ENSSLDG00000008496	zgc:114130	82	75.214	Seriola_lalandi_dorsalis
ENSACIG00000017364	zgc:114130	99	75.623	ENSSPAG00000006856	zgc:114130	82	73.684	Stegastes_partitus
ENSACIG00000017364	zgc:114130	99	67.680	ENSTRUG00000022473	zgc:114130	82	65.193	Takifugu_rubripes
ENSACIG00000017364	zgc:114130	51	46.269	ENSTRUG00000020720	sb:cb81	56	44.130	Takifugu_rubripes
ENSACIG00000017364	zgc:114130	74	34.409	ENSTNIG00000000183	zgc:162730	68	35.018	Tetraodon_nigroviridis
ENSACIG00000017364	zgc:114130	91	37.015	ENSTNIG00000019802	sb:cb81	91	38.253	Tetraodon_nigroviridis
ENSACIG00000017364	zgc:114130	96	57.714	ENSXCOG00000012792	zgc:114130	85	55.714	Xiphophorus_couchianus
ENSACIG00000017364	zgc:114130	96	67.123	ENSXMAG00000026836	zgc:114130	83	66.851	Xiphophorus_maculatus