EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000017394 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 4615 bases
Position: chrCCOE01001115.1:115336-119950
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000022363	KH_1	PF00013.29	1.5e-21	1	2
ENSACIP00000022363	KH_1	PF00013.29	1.5e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000022959	-	1622	-	ENSACIP00000022363	540 (aa)	-	-

Gene Model

Click here to download ENSACIG00000017394's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000017394's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000017394	-	63	62.934	ENSACIG00000017783	mex3b	61	76.684
ENSACIG00000017394	-	97	46.226	ENSACIG00000017738	-	82	50.336

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000017394	-	97	98.292	ENSAPOG00000008262	-	100	98.292	Acanthochromis_polyacanthus
ENSACIG00000017394	-	97	98.292	ENSAOCG00000015646	-	100	98.292	Amphiprion_ocellaris
ENSACIG00000017394	-	97	98.292	ENSAPEG00000022160	-	100	98.292	Amphiprion_percula
ENSACIG00000017394	-	97	98.479	ENSATEG00000006186	-	100	98.479	Anabas_testudineus
ENSACIG00000017394	-	97	98.664	ENSACLG00000010278	-	83	98.664	Astatotilapia_calliptera
ENSACIG00000017394	-	97	80.835	ENSAMXG00000024633	-	100	81.250	Astyanax_mexicanus
ENSACIG00000017394	-	97	89.504	ENSCSEG00000012003	-	100	89.313	Cynoglossus_semilaevis
ENSACIG00000017394	-	97	90.702	ENSCVAG00000020021	-	100	89.564	Cyprinodon_variegatus
ENSACIG00000017394	-	97	83.427	ENSDARG00000076638	FO082781.1	100	82.486	Danio_rerio
ENSACIG00000017394	-	97	91.048	ENSELUG00000012012	-	100	90.476	Esox_lucius
ENSACIG00000017394	-	97	93.548	ENSFHEG00000003026	-	100	92.600	Fundulus_heteroclitus
ENSACIG00000017394	-	65	87.097	ENSGMOG00000006456	-	69	80.556	Gadus_morhua
ENSACIG00000017394	-	97	94.508	ENSGAFG00000021726	-	100	93.750	Gambusia_affinis
ENSACIG00000017394	-	97	82.214	ENSGACG00000013282	-	99	80.686	Gasterosteus_aculeatus
ENSACIG00000017394	-	97	98.664	ENSHBUG00000009342	-	83	98.664	Haplochromis_burtoni
ENSACIG00000017394	-	95	77.819	ENSHCOG00000007164	-	100	77.449	Hippocampus_comes
ENSACIG00000017394	-	97	76.710	ENSIPUG00000006083	mex3a	96	77.264	Ictalurus_punctatus
ENSACIG00000017394	-	97	91.760	ENSKMAG00000015538	-	93	91.948	Kryptolebias_marmoratus
ENSACIG00000017394	-	97	97.519	ENSLBEG00000016402	-	100	97.519	Labrus_bergylta
ENSACIG00000017394	-	97	77.528	ENSLOCG00000008857	-	100	77.341	Lepisosteus_oculatus
ENSACIG00000017394	-	97	98.664	ENSMAMG00000010269	-	100	98.664	Mastacembelus_armatus
ENSACIG00000017394	-	97	98.282	ENSMZEG00005017507	-	100	98.282	Maylandia_zebra
ENSACIG00000017394	-	94	95.098	ENSMMOG00000017114	-	90	95.098	Mola_mola
ENSACIG00000017394	-	97	97.901	ENSMALG00000004078	-	93	97.901	Monopterus_albus
ENSACIG00000017394	-	97	98.664	ENSNBRG00000005141	-	100	98.664	Neolamprologus_brichardi
ENSACIG00000017394	-	97	91.031	ENSONIG00000002279	-	100	90.133	Oreochromis_niloticus
ENSACIG00000017394	-	97	90.857	ENSORLG00000024166	-	91	91.238	Oryzias_latipes
ENSACIG00000017394	-	97	91.238	ENSORLG00020013757	-	91	91.619	Oryzias_latipes_hni
ENSACIG00000017394	-	97	90.857	ENSORLG00015019602	-	91	91.238	Oryzias_latipes_hsok
ENSACIG00000017394	-	97	91.461	ENSOMEG00000020254	-	100	91.841	Oryzias_melastigma
ENSACIG00000017394	-	97	81.939	ENSPKIG00000009869	-	93	82.319	Paramormyrops_kingsleyae
ENSACIG00000017394	-	97	80.114	ENSPKIG00000020911	-	100	81.061	Paramormyrops_kingsleyae
ENSACIG00000017394	-	97	77.881	ENSPMGG00000004206	-	100	77.881	Periophthalmus_magnuspinnatus
ENSACIG00000017394	-	97	94.151	ENSPFOG00000011366	-	100	93.396	Poecilia_formosa
ENSACIG00000017394	-	97	94.329	ENSPLAG00000007972	-	100	93.573	Poecilia_latipinna
ENSACIG00000017394	-	97	94.140	ENSPMEG00000001392	-	100	93.384	Poecilia_mexicana
ENSACIG00000017394	-	97	94.151	ENSPREG00000017309	-	100	93.585	Poecilia_reticulata
ENSACIG00000017394	-	97	98.664	ENSPNYG00000018270	-	100	98.664	Pundamilia_nyererei
ENSACIG00000017394	-	97	80.073	ENSPNAG00000004505	-	100	80.439	Pygocentrus_nattereri
ENSACIG00000017394	-	97	79.507	ENSSFOG00015024157	-	100	79.924	Scleropages_formosus
ENSACIG00000017394	-	70	92.105	ENSSFOG00015008589	-	93	63.014	Scleropages_formosus
ENSACIG00000017394	-	97	95.810	ENSSMAG00000016216	-	100	95.810	Scophthalmus_maximus
ENSACIG00000017394	-	97	98.476	ENSSDUG00000006298	-	84	98.476	Seriola_dumerili
ENSACIG00000017394	-	97	98.476	ENSSLDG00000012129	-	84	98.476	Seriola_lalandi_dorsalis
ENSACIG00000017394	-	97	98.092	ENSSPAG00000012030	-	100	98.092	Stegastes_partitus
ENSACIG00000017394	-	97	93.893	ENSTRUG00000007796	-	100	93.893	Takifugu_rubripes
ENSACIG00000017394	-	71	93.473	ENSTNIG00000004473	-	96	93.473	Tetraodon_nigroviridis
ENSACIG00000017394	-	71	87.411	ENSXCOG00000004225	-	89	87.411	Xiphophorus_couchianus
ENSACIG00000017394	-	97	94.508	ENSXMAG00000013412	-	100	93.750	Xiphophorus_maculatus