EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000017535 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 759 bases
Position: chrCCOE01001160.1:512160-512918
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000022526	RVT_1	PF00078.27	2.1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000023128	-	759	-	ENSACIP00000022526	252 (aa)	-	-

Gene Model

Click here to download ENSACIG00000017535's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000017535's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000017535	-	100	91.270	ENSACIG00000002701	-	100	91.270
ENSACIG00000017535	-	100	92.063	ENSACIG00000002047	-	98	92.063
ENSACIG00000017535	-	72	33.696	ENSACIG00000009946	-	72	33.696

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000017535	-	77	32.323	ENSHCOG00000010320	-	79	32.323	Hippocampus_comes
ENSACIG00000017535	-	75	57.672	ENSIPUG00000002371	-	72	57.672	Ictalurus_punctatus
ENSACIG00000017535	-	96	57.025	ENSIPUG00000010429	-	93	57.025	Ictalurus_punctatus
ENSACIG00000017535	-	79	57.000	ENSIPUG00000000759	-	91	57.000	Ictalurus_punctatus
ENSACIG00000017535	-	80	32.673	ENSLACG00000006232	-	91	32.673	Latimeria_chalumnae
ENSACIG00000017535	-	95	57.083	ENSMZEG00005010519	-	94	57.083	Maylandia_zebra
ENSACIG00000017535	-	98	30.522	ENSPSIG00000001771	-	80	30.522	Pelodiscus_sinensis