EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000017738 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: KIAA2031|OK/SW-cl.4|RKHD1|RNF193|Tino
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 3787 bases
Position: chrCCOE01001572.1:644618-648404
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000022817	KH_1	PF00013.29	3.3e-26	1	2
ENSACIP00000022817	KH_1	PF00013.29	3.3e-26	2	2
ENSACIP00000022808	KH_1	PF00013.29	6e-26	1	2
ENSACIP00000022808	KH_1	PF00013.29	6e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000023413	-	1764	-	ENSACIP00000022808	587 (aa)	-	-
ENSACIT00000023423	-	1437	-	ENSACIP00000022817	478 (aa)	-	-

Gene Model

Click here to download ENSACIG00000017738's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000017738's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000017738	-	82	48.000	ENSACIG00000005655	-	90	46.906
ENSACIG00000017738	-	82	50.336	ENSACIG00000017394	-	97	46.226
ENSACIG00000017738	-	92	53.737	ENSACIG00000017783	mex3b	97	52.727

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000017738	-	80	52.964	ENSG00000181588	MEX3D	83	85.027	Homo_sapiens
ENSACIG00000017738	-	84	84.127	ENSAPOG00000000124	MEX3D	98	84.921	Acanthochromis_polyacanthus
ENSACIG00000017738	-	80	88.981	ENSAOCG00000015529	MEX3D	98	90.229	Amphiprion_ocellaris
ENSACIG00000017738	-	80	88.981	ENSAPEG00000012520	MEX3D	98	90.229	Amphiprion_percula
ENSACIG00000017738	-	100	89.030	ENSATEG00000015620	MEX3D	100	86.381	Anabas_testudineus
ENSACIG00000017738	-	76	53.151	ENSANAG00000035413	-	72	79.512	Aotus_nancymaae
ENSACIG00000017738	-	91	90.130	ENSACLG00000002826	MEX3D	100	89.758	Astatotilapia_calliptera
ENSACIG00000017738	-	80	73.333	ENSAMXG00000042500	MEX3D	99	72.176	Astyanax_mexicanus
ENSACIG00000017738	-	79	70.370	ENSBTAG00000040334	MEX3D	64	82.353	Bos_taurus
ENSACIG00000017738	-	80	53.295	ENSCJAG00000045432	MEX3D	65	82.843	Callithrix_jacchus
ENSACIG00000017738	-	72	51.606	ENSCAFG00000023712	MEX3D	84	83.030	Canis_familiaris
ENSACIG00000017738	-	80	54.348	ENSCAFG00020017245	MEX3D	65	81.863	Canis_lupus_dingo
ENSACIG00000017738	-	79	70.370	ENSCHIG00000012929	MEX3D	91	48.142	Capra_hircus
ENSACIG00000017738	-	80	53.089	ENSCCAG00000028942	MEX3D	78	82.353	Cebus_capucinus
ENSACIG00000017738	-	80	53.448	ENSCATG00000029350	MEX3D	68	82.353	Cercocebus_atys
ENSACIG00000017738	-	80	53.935	ENSCSAG00000011984	MEX3D	70	82.353	Chlorocebus_sabaeus
ENSACIG00000017738	-	94	55.178	ENSCPBG00000018438	MEX3D	92	53.516	Chrysemys_picta_bellii
ENSACIG00000017738	-	89	50.427	ENSCGRG00001023775	Mex3d	83	60.726	Cricetulus_griseus_chok1gshd
ENSACIG00000017738	-	84	52.182	ENSCGRG00000018060	Mex3d	74	80.095	Cricetulus_griseus_crigri
ENSACIG00000017738	-	80	80.457	ENSCSEG00000014157	MEX3D	98	80.338	Cynoglossus_semilaevis
ENSACIG00000017738	-	100	90.909	ENSCVAG00000021251	MEX3D	92	88.204	Cyprinodon_variegatus
ENSACIG00000017738	-	55	59.672	ENSDNOG00000041317	-	79	59.672	Dasypus_novemcinctus
ENSACIG00000017738	-	77	70.370	ENSEASG00005021741	MEX3D	91	47.200	Equus_asinus_asinus
ENSACIG00000017738	-	79	70.370	ENSECAG00000030546	MEX3D	66	47.021	Equus_caballus
ENSACIG00000017738	-	80	77.640	ENSELUG00000008214	MEX3D	97	78.719	Esox_lucius
ENSACIG00000017738	-	80	51.935	ENSFCAG00000043755	MEX3D	76	82.915	Felis_catus
ENSACIG00000017738	-	56	70.000	ENSFDAG00000009670	-	91	71.429	Fukomys_damarensis
ENSACIG00000017738	-	80	96.522	ENSFHEG00000002269	MEX3D	79	96.522	Fundulus_heteroclitus
ENSACIG00000017738	-	60	98.182	ENSGMOG00000012217	-	54	84.932	Gadus_morhua
ENSACIG00000017738	-	80	58.407	ENSGALG00000052296	MEX3D	90	59.091	Gallus_gallus
ENSACIG00000017738	-	100	87.797	ENSGAFG00000008425	MEX3D	100	87.267	Gambusia_affinis
ENSACIG00000017738	-	86	86.364	ENSGACG00000015299	MEX3D	71	86.301	Gasterosteus_aculeatus
ENSACIG00000017738	-	94	54.545	ENSGAGG00000001233	MEX3D	90	53.504	Gopherus_agassizii
ENSACIG00000017738	-	81	51.107	ENSGGOG00000001083	-	81	81.863	Gorilla_gorilla
ENSACIG00000017738	-	91	89.834	ENSHBUG00000021600	MEX3D	100	89.834	Haplochromis_burtoni
ENSACIG00000017738	-	80	53.564	ENSHGLG00000015152	MEX3D	89	49.585	Heterocephalus_glaber_female
ENSACIG00000017738	-	100	79.210	ENSHCOG00000001289	MEX3D	84	98.214	Hippocampus_comes
ENSACIG00000017738	-	83	71.973	ENSIPUG00000019444	MEX3D	99	68.254	Ictalurus_punctatus
ENSACIG00000017738	-	78	68.519	ENSSTOG00000025299	MEX3D	82	68.519	Ictidomys_tridecemlineatus
ENSACIG00000017738	-	81	52.000	ENSJJAG00000024350	Mex3d	75	81.863	Jaculus_jaculus
ENSACIG00000017738	-	83	85.947	ENSKMAG00000006645	MEX3D	98	87.373	Kryptolebias_marmoratus
ENSACIG00000017738	-	93	96.667	ENSLBEG00000000974	MEX3D	89	98.214	Labrus_bergylta
ENSACIG00000017738	-	81	57.895	ENSLACG00000016407	MEX3D	100	53.096	Latimeria_chalumnae
ENSACIG00000017738	-	80	52.896	ENSMFAG00000043798	MEX3D	99	51.238	Macaca_fascicularis
ENSACIG00000017738	-	80	53.831	ENSMMUG00000043577	MEX3D	82	76.923	Macaca_mulatta
ENSACIG00000017738	-	81	49.893	ENSMNEG00000043766	MEX3D	83	49.105	Macaca_nemestrina
ENSACIG00000017738	-	100	91.133	ENSMAMG00000009575	MEX3D	100	91.133	Mastacembelus_armatus
ENSACIG00000017738	-	100	92.424	ENSMZEG00005025626	MEX3D	86	91.489	Maylandia_zebra
ENSACIG00000017738	-	73	59.009	ENSMGAG00000002325	MEX3D	100	55.656	Meleagris_gallopavo
ENSACIG00000017738	-	78	68.519	ENSMAUG00000014977	Mex3d	73	80.095	Mesocricetus_auratus
ENSACIG00000017738	-	81	53.374	ENSMICG00000036648	MEX3D	65	82.843	Microcebus_murinus
ENSACIG00000017738	-	84	52.545	ENSMOCG00000010308	Mex3d	69	83.417	Microtus_ochrogaster
ENSACIG00000017738	-	63	80.516	ENSMMOG00000010613	-	64	82.493	Mola_mola
ENSACIG00000017738	-	83	56.405	ENSMODG00000004116	MEX3D	80	80.569	Monodelphis_domestica
ENSACIG00000017738	-	75	88.488	ENSMALG00000020525	MEX3D	94	88.036	Monopterus_albus
ENSACIG00000017738	-	84	52.212	MGP_CAROLIEiJ_G0015582	Mex3d	73	80.095	Mus_caroli
ENSACIG00000017738	-	78	67.857	ENSMUSG00000048696	Mex3d	62	80.095	Mus_musculus
ENSACIG00000017738	-	78	67.857	MGP_SPRETEiJ_G0016400	Mex3d	73	80.095	Mus_spretus
ENSACIG00000017738	-	73	53.774	ENSMLUG00000017018	MEX3D	98	52.740	Myotis_lucifugus
ENSACIG00000017738	-	84	52.000	ENSNGAG00000021771	Mex3d	100	43.834	Nannospalax_galili
ENSACIG00000017738	-	91	90.449	ENSNBRG00000020089	MEX3D	100	89.513	Neolamprologus_brichardi
ENSACIG00000017738	-	80	84.426	ENSNLEG00000001719	-	88	76.923	Nomascus_leucogenys
ENSACIG00000017738	-	75	55.157	ENSMEUG00000016404	-	86	83.920	Notamacropus_eugenii
ENSACIG00000017738	-	61	52.754	ENSOPRG00000008708	-	84	54.085	Ochotona_princeps
ENSACIG00000017738	-	90	53.106	ENSODEG00000012631	MEX3D	92	49.178	Octodon_degus
ENSACIG00000017738	-	54	63.072	ENSOANG00000011764	-	97	58.090	Ornithorhynchus_anatinus
ENSACIG00000017738	-	97	92.857	ENSORLG00000015223	MEX3D	88	100.000	Oryzias_latipes
ENSACIG00000017738	-	100	86.161	ENSORLG00020017489	MEX3D	89	100.000	Oryzias_latipes_hni
ENSACIG00000017738	-	100	85.683	ENSORLG00015017429	MEX3D	100	94.737	Oryzias_latipes_hsok
ENSACIG00000017738	-	100	89.865	ENSOMEG00000020682	MEX3D	100	91.047	Oryzias_melastigma
ENSACIG00000017738	-	80	53.282	ENSOGAG00000032843	MEX3D	79	82.843	Otolemur_garnettii
ENSACIG00000017738	-	80	54.712	ENSPPRG00000024256	MEX3D	67	69.643	Panthera_pardus
ENSACIG00000017738	-	80	53.654	ENSPTRG00000010208	MEX3D	72	81.863	Pan_troglodytes
ENSACIG00000017738	-	82	50.098	ENSPANG00000025407	MEX3D	81	66.418	Papio_anubis
ENSACIG00000017738	-	100	64.789	ENSPKIG00000018608	MEX3D	94	67.755	Paramormyrops_kingsleyae
ENSACIG00000017738	-	100	62.739	ENSPKIG00000011176	-	99	66.799	Paramormyrops_kingsleyae
ENSACIG00000017738	-	53	78.846	ENSPSIG00000004353	MEX3D	98	56.183	Pelodiscus_sinensis
ENSACIG00000017738	-	100	82.343	ENSPMGG00000017213	-	100	83.192	Periophthalmus_magnuspinnatus
ENSACIG00000017738	-	88	55.935	ENSPCIG00000000826	MEX3D	88	52.827	Phascolarctos_cinereus
ENSACIG00000017738	-	80	100.000	ENSPFOG00000013402	MEX3D	86	98.214	Poecilia_formosa
ENSACIG00000017738	-	83	85.366	ENSPLAG00000018945	MEX3D	100	85.366	Poecilia_latipinna
ENSACIG00000017738	-	83	82.791	ENSPMEG00000009307	MEX3D	96	84.568	Poecilia_mexicana
ENSACIG00000017738	-	82	86.626	ENSPREG00000017736	MEX3D	96	89.506	Poecilia_reticulata
ENSACIG00000017738	-	79	52.556	ENSPPYG00000009324	-	83	84.184	Pongo_abelii
ENSACIG00000017738	-	61	51.862	ENSPCAG00000010972	-	100	51.781	Procavia_capensis
ENSACIG00000017738	-	80	53.089	ENSPCOG00000021111	MEX3D	72	82.843	Propithecus_coquereli
ENSACIG00000017738	-	91	91.620	ENSPNYG00000006622	-	100	91.248	Pundamilia_nyererei
ENSACIG00000017738	-	99	87.692	ENSPNAG00000027243	MEX3D	99	71.660	Pygocentrus_nattereri
ENSACIG00000017738	-	77	65.385	ENSRNOG00000030830	Mex3d	67	80.095	Rattus_norvegicus
ENSACIG00000017738	-	100	61.392	ENSSFOG00015003876	mex3d	100	60.794	Scleropages_formosus
ENSACIG00000017738	-	92	98.182	ENSSMAG00000003087	MEX3D	100	87.500	Scophthalmus_maximus
ENSACIG00000017738	-	100	83.832	ENSSDUG00000015559	MEX3D	100	86.028	Seriola_dumerili
ENSACIG00000017738	-	100	89.041	ENSSLDG00000010251	MEX3D	100	89.344	Seriola_lalandi_dorsalis
ENSACIG00000017738	-	95	53.960	ENSSPUG00000015849	MEX3D	93	52.483	Sphenodon_punctatus
ENSACIG00000017738	-	96	90.411	ENSSPAG00000005264	MEX3D	85	90.526	Stegastes_partitus
ENSACIG00000017738	-	81	52.462	ENSSSCG00000021750	MEX3D	65	82.353	Sus_scrofa
ENSACIG00000017738	-	75	57.783	ENSTGUG00000000201	MEX3D	99	55.506	Taeniopygia_guttata
ENSACIG00000017738	-	89	79.087	ENSTRUG00000007986	MEX3D	98	81.028	Takifugu_rubripes
ENSACIG00000017738	-	86	87.143	ENSTNIG00000015325	MEX3D	84	79.457	Tetraodon_nigroviridis
ENSACIG00000017738	-	76	69.231	ENSTTRG00000008132	MEX3D	83	84.103	Tursiops_truncatus
ENSACIG00000017738	-	87	100.000	ENSXCOG00000008198	MEX3D	100	100.000	Xiphophorus_couchianus
ENSACIG00000017738	-	83	86.600	ENSXMAG00000025266	MEX3D	100	86.800	Xiphophorus_maculatus