EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000017765 (Gene tree)
Gene ID: -
Gene Symbol: rif1
Alias: fc38c03|si:dkey-89p3.2|wu:fc38c03
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 23166 bases
Position: chrCCOE01000189.1:205747-228912
Accession: ZDB-GENE-030131-3406
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000022929	Rif1_N	PF12231.8	2.2e-81	1	1
ENSACIP00000022950	Rif1_N	PF12231.8	1e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000023559	-	6591	-	ENSACIP00000022950	2196 (aa)	-	-
ENSACIT00000023537	-	6723	-	ENSACIP00000022929	2240 (aa)	-	-

Gene Model

Click here to download ENSACIG00000017765's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000017765's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000017765	rif1	69	50.078	ENSG00000080345	RIF1	97	55.474	Homo_sapiens
ENSACIG00000017765	rif1	98	74.177	ENSAPOG00000011073	rif1	86	74.407	Acanthochromis_polyacanthus
ENSACIG00000017765	rif1	70	50.039	ENSAMEG00000008461	RIF1	65	50.039	Ailuropoda_melanoleuca
ENSACIG00000017765	rif1	99	75.055	ENSAOCG00000017231	rif1	87	75.223	Amphiprion_ocellaris
ENSACIG00000017765	rif1	94	78.571	ENSAPEG00000013228	rif1	87	78.571	Amphiprion_percula
ENSACIG00000017765	rif1	99	74.493	ENSATEG00000022887	rif1	93	77.927	Anabas_testudineus
ENSACIG00000017765	rif1	52	52.412	ENSAPLG00000007092	RIF1	68	52.396	Anas_platyrhynchos
ENSACIG00000017765	rif1	64	54.301	ENSANAG00000024840	RIF1	64	50.943	Aotus_nancymaae
ENSACIG00000017765	rif1	92	57.328	ENSAMXG00000010910	rif1	87	57.328	Astyanax_mexicanus
ENSACIG00000017765	rif1	63	50.308	ENSBTAG00000021020	RIF1	62	50.308	Bos_taurus
ENSACIG00000017765	rif1	71	49.734	ENSCJAG00000003138	RIF1	65	49.848	Callithrix_jacchus
ENSACIG00000017765	rif1	70	50.541	ENSCAFG00000005670	RIF1	62	50.656	Canis_familiaris
ENSACIG00000017765	rif1	70	50.656	ENSCAFG00020016401	RIF1	65	50.656	Canis_lupus_dingo
ENSACIG00000017765	rif1	71	50.386	ENSCHIG00000020327	RIF1	65	50.386	Capra_hircus
ENSACIG00000017765	rif1	69	47.536	ENSTSYG00000008861	RIF1	63	47.772	Carlito_syrichta
ENSACIG00000017765	rif1	60	41.884	ENSCAPG00000008957	RIF1	65	40.000	Cavia_aperea
ENSACIG00000017765	rif1	69	48.098	ENSCPOG00000037898	RIF1	65	48.506	Cavia_porcellus
ENSACIG00000017765	rif1	73	48.096	ENSCCAG00000024760	RIF1	65	48.174	Cebus_capucinus
ENSACIG00000017765	rif1	64	53.805	ENSCATG00000033353	RIF1	58	53.805	Cercocebus_atys
ENSACIG00000017765	rif1	66	49.876	ENSCLAG00000001517	RIF1	63	49.876	Chinchilla_lanigera
ENSACIG00000017765	rif1	69	50.547	ENSCSAG00000016089	RIF1	64	50.547	Chlorocebus_sabaeus
ENSACIG00000017765	rif1	67	51.556	ENSCHOG00000007187	RIF1	61	51.556	Choloepus_hoffmanni
ENSACIG00000017765	rif1	72	49.838	ENSCPBG00000025885	RIF1	68	50.448	Chrysemys_picta_bellii
ENSACIG00000017765	rif1	64	52.551	ENSCANG00000028962	RIF1	56	55.652	Colobus_angolensis_palliatus
ENSACIG00000017765	rif1	65	51.148	ENSCGRG00001024589	Rif1	66	48.217	Cricetulus_griseus_chok1gshd
ENSACIG00000017765	rif1	63	53.065	ENSCGRG00000010713	Rif1	66	49.800	Cricetulus_griseus_crigri
ENSACIG00000017765	rif1	95	71.178	ENSCSEG00000003945	rif1	92	71.588	Cynoglossus_semilaevis
ENSACIG00000017765	rif1	100	67.102	ENSCVAG00000022479	rif1	95	66.942	Cyprinodon_variegatus
ENSACIG00000017765	rif1	71	48.205	ENSDNOG00000011194	RIF1	63	48.434	Dasypus_novemcinctus
ENSACIG00000017765	rif1	59	57.080	ENSETEG00000012421	RIF1	54	57.080	Echinops_telfairi
ENSACIG00000017765	rif1	59	70.395	ENSEASG00005023434	RIF1	57	70.395	Equus_asinus_asinus
ENSACIG00000017765	rif1	68	60.817	ENSECAG00000012679	RIF1	63	60.817	Equus_caballus
ENSACIG00000017765	rif1	73	68.000	ENSELUG00000006826	rif1	59	68.000	Esox_lucius
ENSACIG00000017765	rif1	70	49.576	ENSFCAG00000029742	RIF1	64	49.653	Felis_catus
ENSACIG00000017765	rif1	73	50.353	ENSFDAG00000006538	RIF1	68	50.427	Fukomys_damarensis
ENSACIG00000017765	rif1	100	68.182	ENSFHEG00000013721	rif1	97	68.973	Fundulus_heteroclitus
ENSACIG00000017765	rif1	66	66.917	ENSGMOG00000003517	rif1	91	66.917	Gadus_morhua
ENSACIG00000017765	rif1	58	55.326	ENSGALG00000012484	RIF1	70	51.561	Gallus_gallus
ENSACIG00000017765	rif1	97	65.654	ENSGAFG00000017196	rif1	96	64.447	Gambusia_affinis
ENSACIG00000017765	rif1	94	70.632	ENSGACG00000008579	rif1	93	71.025	Gasterosteus_aculeatus
ENSACIG00000017765	rif1	74	51.327	ENSGAGG00000012595	RIF1	71	48.603	Gopherus_agassizii
ENSACIG00000017765	rif1	58	59.626	ENSGGOG00000040178	RIF1	57	59.626	Gorilla_gorilla
ENSACIG00000017765	rif1	65	80.595	ENSHBUG00000007125	rif1	65	80.527	Haplochromis_burtoni
ENSACIG00000017765	rif1	72	50.316	ENSHGLG00100009807	RIF1	72	50.391	Heterocephalus_glaber_male
ENSACIG00000017765	rif1	99	67.118	ENSHCOG00000015943	rif1	83	68.764	Hippocampus_comes
ENSACIG00000017765	rif1	72	64.944	ENSIPUG00000021703	rif1	70	62.612	Ictalurus_punctatus
ENSACIG00000017765	rif1	71	50.114	ENSSTOG00000020712	RIF1	65	50.537	Ictidomys_tridecemlineatus
ENSACIG00000017765	rif1	72	48.687	ENSJJAG00000023000	Rif1	69	48.084	Jaculus_jaculus
ENSACIG00000017765	rif1	60	71.991	ENSKMAG00000002852	rif1	57	72.202	Kryptolebias_marmoratus
ENSACIG00000017765	rif1	97	73.729	ENSLBEG00000023196	rif1	81	75.630	Labrus_bergylta
ENSACIG00000017765	rif1	69	54.964	ENSLACG00000005425	RIF1	67	54.668	Latimeria_chalumnae
ENSACIG00000017765	rif1	71	60.058	ENSLOCG00000002657	rif1	74	60.933	Lepisosteus_oculatus
ENSACIG00000017765	rif1	74	51.389	ENSLAFG00000009796	RIF1	68	51.389	Loxodonta_africana
ENSACIG00000017765	rif1	69	50.391	ENSMFAG00000032233	RIF1	64	50.391	Macaca_fascicularis
ENSACIG00000017765	rif1	69	50.391	ENSMMUG00000008611	RIF1	64	50.391	Macaca_mulatta
ENSACIG00000017765	rif1	69	50.234	ENSMNEG00000031616	RIF1	64	50.234	Macaca_nemestrina
ENSACIG00000017765	rif1	67	53.805	ENSMLEG00000042945	RIF1	60	53.805	Mandrillus_leucophaeus
ENSACIG00000017765	rif1	77	71.947	ENSMAMG00000001745	rif1	73	71.947	Mastacembelus_armatus
ENSACIG00000017765	rif1	99	78.711	ENSMZEG00005020920	rif1	99	78.058	Maylandia_zebra
ENSACIG00000017765	rif1	52	52.873	ENSMGAG00000012732	RIF1	73	52.956	Meleagris_gallopavo
ENSACIG00000017765	rif1	65	65.289	ENSMAUG00000013158	Rif1	64	65.289	Mesocricetus_auratus
ENSACIG00000017765	rif1	63	54.627	ENSMICG00000046127	RIF1	63	50.943	Microcebus_murinus
ENSACIG00000017765	rif1	72	48.111	ENSMOCG00000009381	Rif1	67	47.900	Microtus_ochrogaster
ENSACIG00000017765	rif1	99	69.728	ENSMMOG00000006519	rif1	93	70.677	Mola_mola
ENSACIG00000017765	rif1	69	51.852	ENSMODG00000003703	RIF1	65	51.095	Monodelphis_domestica
ENSACIG00000017765	rif1	70	49.274	MGP_CAROLIEiJ_G0023555	Rif1	66	49.427	Mus_caroli
ENSACIG00000017765	rif1	73	49.015	ENSMUSG00000036202	Rif1	68	49.167	Mus_musculus
ENSACIG00000017765	rif1	75	46.119	MGP_PahariEiJ_G0025006	Rif1	71	46.489	Mus_pahari
ENSACIG00000017765	rif1	73	49.391	MGP_SPRETEiJ_G0024476	Rif1	68	49.696	Mus_spretus
ENSACIG00000017765	rif1	73	49.804	ENSMPUG00000000371	RIF1	66	49.804	Mustela_putorius_furo
ENSACIG00000017765	rif1	100	78.063	ENSNBRG00000014257	rif1	100	78.019	Neolamprologus_brichardi
ENSACIG00000017765	rif1	69	49.651	ENSNLEG00000010955	RIF1	63	49.574	Nomascus_leucogenys
ENSACIG00000017765	rif1	50	64.732	ENSMEUG00000007601	-	52	64.732	Notamacropus_eugenii
ENSACIG00000017765	rif1	70	48.137	ENSODEG00000003950	RIF1	65	48.083	Octodon_degus
ENSACIG00000017765	rif1	99	83.759	ENSONIG00000013657	rif1	96	83.759	Oreochromis_niloticus
ENSACIG00000017765	rif1	59	56.526	ENSOANG00000006078	-	55	56.314	Ornithorhynchus_anatinus
ENSACIG00000017765	rif1	73	48.681	ENSOCUG00000017435	RIF1	67	49.317	Oryctolagus_cuniculus
ENSACIG00000017765	rif1	99	56.932	ENSORLG00020001302	rif1	93	64.414	Oryzias_latipes_hni
ENSACIG00000017765	rif1	99	63.111	ENSORLG00015000009	rif1	90	69.902	Oryzias_latipes_hsok
ENSACIG00000017765	rif1	63	65.747	ENSOMEG00000021513	rif1	57	69.306	Oryzias_melastigma
ENSACIG00000017765	rif1	74	50.472	ENSOGAG00000006141	RIF1	68	50.472	Otolemur_garnettii
ENSACIG00000017765	rif1	71	50.810	ENSOARG00000008930	RIF1	65	50.810	Ovis_aries
ENSACIG00000017765	rif1	69	50.000	ENSPPAG00000023754	RIF1	64	49.922	Pan_paniscus
ENSACIG00000017765	rif1	73	49.268	ENSPPRG00000003618	RIF1	66	49.268	Panthera_pardus
ENSACIG00000017765	rif1	73	49.268	ENSPTIG00000020652	RIF1	66	49.268	Panthera_tigris_altaica
ENSACIG00000017765	rif1	69	50.078	ENSPTRG00000012534	RIF1	64	50.000	Pan_troglodytes
ENSACIG00000017765	rif1	64	53.894	ENSPANG00000008525	RIF1	58	53.894	Papio_anubis
ENSACIG00000017765	rif1	89	64.740	ENSPKIG00000004267	rif1	72	64.740	Paramormyrops_kingsleyae
ENSACIG00000017765	rif1	76	64.963	ENSPMGG00000016141	rif1	85	65.561	Periophthalmus_magnuspinnatus
ENSACIG00000017765	rif1	70	50.553	ENSPEMG00000000446	Rif1	67	50.715	Peromyscus_maniculatus_bairdii
ENSACIG00000017765	rif1	68	51.537	ENSPCIG00000009185	RIF1	65	51.537	Phascolarctos_cinereus
ENSACIG00000017765	rif1	55	69.169	ENSPFOG00000000554	-	91	71.810	Poecilia_formosa
ENSACIG00000017765	rif1	63	70.472	ENSPFOG00000017804	rif1	92	72.782	Poecilia_formosa
ENSACIG00000017765	rif1	99	65.716	ENSPLAG00000017945	rif1	92	71.094	Poecilia_latipinna
ENSACIG00000017765	rif1	52	68.367	ENSPMEG00000006897	-	95	67.687	Poecilia_mexicana
ENSACIG00000017765	rif1	100	70.868	ENSPREG00000018052	rif1	96	70.798	Poecilia_reticulata
ENSACIG00000017765	rif1	69	50.469	ENSPPYG00000012846	RIF1	64	50.391	Pongo_abelii
ENSACIG00000017765	rif1	64	54.178	ENSPCOG00000027888	RIF1	64	50.747	Propithecus_coquereli
ENSACIG00000017765	rif1	59	62.245	ENSPVAG00000014276	RIF1	57	62.245	Pteropus_vampyrus
ENSACIG00000017765	rif1	99	77.093	ENSPNYG00000012940	rif1	99	77.076	Pundamilia_nyererei
ENSACIG00000017765	rif1	89	61.637	ENSPNAG00000016685	rif1	70	62.673	Pygocentrus_nattereri
ENSACIG00000017765	rif1	65	51.888	ENSRNOG00000054901	Rif1	67	47.936	Rattus_norvegicus
ENSACIG00000017765	rif1	69	49.843	ENSRBIG00000003704	RIF1	63	49.843	Rhinopithecus_bieti
ENSACIG00000017765	rif1	69	50.469	ENSRROG00000028206	RIF1	64	50.469	Rhinopithecus_roxellana
ENSACIG00000017765	rif1	63	54.023	ENSSBOG00000029530	RIF1	56	55.172	Saimiri_boliviensis_boliviensis
ENSACIG00000017765	rif1	69	51.539	ENSSHAG00000018552	RIF1	65	51.618	Sarcophilus_harrisii
ENSACIG00000017765	rif1	60	60.857	ENSSFOG00015021539	rif1	56	64.411	Scleropages_formosus
ENSACIG00000017765	rif1	85	70.007	ENSSMAG00000011704	rif1	68	76.462	Scophthalmus_maximus
ENSACIG00000017765	rif1	99	69.580	ENSSDUG00000015632	rif1	99	69.207	Seriola_dumerili
ENSACIG00000017765	rif1	99	73.928	ENSSLDG00000019531	rif1	93	78.398	Seriola_lalandi_dorsalis
ENSACIG00000017765	rif1	52	51.889	ENSSPUG00000003062	RIF1	52	52.013	Sphenodon_punctatus
ENSACIG00000017765	rif1	61	79.276	ENSSPAG00000018359	rif1	88	79.276	Stegastes_partitus
ENSACIG00000017765	rif1	70	50.311	ENSSSCG00000016395	RIF1	64	50.622	Sus_scrofa
ENSACIG00000017765	rif1	97	70.334	ENSTRUG00000015808	rif1	88	72.491	Takifugu_rubripes
ENSACIG00000017765	rif1	93	69.018	ENSTNIG00000011538	rif1	87	69.385	Tetraodon_nigroviridis
ENSACIG00000017765	rif1	74	54.435	ENSTBEG00000016082	RIF1	68	54.435	Tupaia_belangeri
ENSACIG00000017765	rif1	70	50.586	ENSTTRG00000011190	RIF1	64	50.586	Tursiops_truncatus
ENSACIG00000017765	rif1	59	47.098	ENSUAMG00000026385	RIF1	60	47.098	Ursus_americanus
ENSACIG00000017765	rif1	70	49.496	ENSUMAG00000000337	RIF1	67	52.354	Ursus_maritimus
ENSACIG00000017765	rif1	70	48.940	ENSVPAG00000002162	RIF1	63	48.940	Vicugna_pacos
ENSACIG00000017765	rif1	71	50.616	ENSVVUG00000011293	RIF1	65	50.616	Vulpes_vulpes
ENSACIG00000017765	rif1	72	51.118	ENSXETG00000004530	rif1	69	51.118	Xenopus_tropicalis
ENSACIG00000017765	rif1	100	65.710	ENSXMAG00000000506	rif1	95	66.102	Xiphophorus_maculatus