EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSACIG00000017871 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Amphilophus_citrinellus
Status
putative
Strand
Plus strand
Length
14846 bases
Position
chrCCOE01001866.1:9385-24230
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACIP00000022989RIO1PF01163.220.0001411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACIT00000023598-1515-ENSACIP00000022989504 (aa)--
Gene Model
Click here to download ENSACIG00000017871's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000017871's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSACIG00000017871-9048.859ENSACIG00000019490nuak28148.473
ENSACIG00000017871-5033.188ENSACIG00000015277rps6ka46333.188
ENSACIG00000017871-5233.453ENSACIG00000002463dapk2b7533.453
ENSACIG00000017871-8849.136ENSACIG00000002275nuak1b7854.953
ENSACIG00000017871-5032.830ENSACIG00000017627camk1gb5932.830
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACIG00000017871-9846.747ENSG00000163545NUAK26666.904Homo_sapiens
ENSACIG00000017871-9048.113ENSAPOG00000000485nuak28247.538Acanthochromis_polyacanthus
ENSACIG00000017871-8950.891ENSAOCG00000022359nuak28550.298Amphiprion_ocellaris
ENSACIG00000017871-8950.693ENSAPEG00000014640nuak28650.099Amphiprion_percula
ENSACIG00000017871-9047.101ENSATEG00000006373nuak28246.869Anabas_testudineus
ENSACIG00000017871-9560.258ENSATEG00000003834si:ch211-117c9.19060.258Anabas_testudineus
ENSACIG00000017871-9047.464ENSACAG00000014491NUAK28647.187Anolis_carolinensis
ENSACIG00000017871-9846.062ENSANAG00000023561NUAK29045.034Aotus_nancymaae
ENSACIG00000017871-9589.412ENSACLG00000009680si:ch211-117c9.17689.412Astatotilapia_calliptera
ENSACIG00000017871-9050.000ENSACLG00000022385nuak28549.803Astatotilapia_calliptera
ENSACIG00000017871-9245.604ENSAMXG00000036486nuak26565.000Astyanax_mexicanus
ENSACIG00000017871-9846.233ENSCJAG00000040262NUAK27166.904Callithrix_jacchus
ENSACIG00000017871-9148.718ENSCAFG00000010038NUAK27848.718Canis_familiaris
ENSACIG00000017871-9148.718ENSCAFG00020005323NUAK28348.718Canis_lupus_dingo
ENSACIG00000017871-9148.629ENSCHIG00000013817NUAK28448.629Capra_hircus
ENSACIG00000017871-9148.998ENSTSYG00000033748NUAK27848.998Carlito_syrichta
ENSACIG00000017871-9146.847ENSCPOG00000011773NUAK28546.667Cavia_porcellus
ENSACIG00000017871-9148.270ENSCCAG00000019631NUAK28448.452Cebus_capucinus
ENSACIG00000017871-9846.575ENSCATG00000044068NUAK26666.904Cercocebus_atys
ENSACIG00000017871-9146.499ENSCLAG00000012570NUAK28446.751Chinchilla_lanigera
ENSACIG00000017871-9846.747ENSCSAG00000014618NUAK26666.904Chlorocebus_sabaeus
ENSACIG00000017871-9145.138ENSCPBG00000001503NUAK28544.954Chrysemys_picta_bellii
ENSACIG00000017871-9046.474ENSCSEG00000002218nuak28447.556Cynoglossus_semilaevis
ENSACIG00000017871-9346.293ENSCVAG00000023192nuak28547.290Cyprinodon_variegatus
ENSACIG00000017871-9557.792ENSCVAG00000015427si:ch211-117c9.18854.708Cyprinodon_variegatus
ENSACIG00000017871-5272.556ENSDARG00000090179si:ch211-117c9.19372.556Danio_rerio
ENSACIG00000017871-9146.705ENSDARG00000063661nuak28447.104Danio_rerio
ENSACIG00000017871-9148.175ENSDNOG00000031509NUAK28247.263Dasypus_novemcinctus
ENSACIG00000017871-9146.416ENSDORG00000013111Nuak28547.331Dipodomys_ordii
ENSACIG00000017871-7243.617ENSEBUG00000004356nuak27143.351Eptatretus_burgeri
ENSACIG00000017871-9148.812ENSEASG00005005777NUAK28348.812Equus_asinus_asinus
ENSACIG00000017871-9148.629ENSECAG00000014699NUAK28348.182Equus_caballus
ENSACIG00000017871-9146.704ENSELUG00000014173nuak28045.656Esox_lucius
ENSACIG00000017871-9276.504ENSELUG00000002633si:ch211-117c9.17176.504Esox_lucius
ENSACIG00000017871-9149.818ENSFCAG00000043568NUAK28248.723Felis_catus
ENSACIG00000017871-8149.080ENSFALG00000000621NUAK29648.697Ficedula_albicollis
ENSACIG00000017871-9578.630ENSFHEG00000018818-7778.630Fundulus_heteroclitus
ENSACIG00000017871-9048.000ENSGMOG00000008068nuak28647.228Gadus_morhua
ENSACIG00000017871-9146.474ENSGALG00000036616NUAK28546.196Gallus_gallus
ENSACIG00000017871-9346.097ENSGAFG00000021595nuak28446.805Gambusia_affinis
ENSACIG00000017871-9476.776ENSGAFG00000006164si:ch211-117c9.17876.776Gambusia_affinis
ENSACIG00000017871-9046.886ENSGACG00000001061nuak28647.338Gasterosteus_aculeatus
ENSACIG00000017871-9145.688ENSGAGG00000011826NUAK28545.505Gopherus_agassizii
ENSACIG00000017871-9047.802ENSHBUG00000002854nuak28448.679Haplochromis_burtoni
ENSACIG00000017871-9147.826ENSHGLG00000018780NUAK28445.636Heterocephalus_glaber_female
ENSACIG00000017871-9148.007ENSHGLG00100004449NUAK28445.455Heterocephalus_glaber_male
ENSACIG00000017871-8688.686ENSHCOG00000001701si:ch211-117c9.17488.686Hippocampus_comes
ENSACIG00000017871-9148.723ENSIPUG00000017552nuak28546.792Ictalurus_punctatus
ENSACIG00000017871-9147.263ENSJJAG00000022561Nuak28447.263Jaculus_jaculus
ENSACIG00000017871-9146.112ENSKMAG00000021452nuak28448.106Kryptolebias_marmoratus
ENSACIG00000017871-9048.106ENSLBEG00000013643nuak28147.818Labrus_bergylta
ENSACIG00000017871-9147.866ENSLACG00000009120NUAK28347.681Latimeria_chalumnae
ENSACIG00000017871-9846.233ENSMFAG00000038432NUAK26666.548Macaca_fascicularis
ENSACIG00000017871-9846.575ENSMMUG00000018584NUAK26666.548Macaca_mulatta
ENSACIG00000017871-9846.575ENSMNEG00000035837NUAK26667.260Macaca_nemestrina
ENSACIG00000017871-9846.575ENSMLEG00000040864NUAK26666.904Mandrillus_leucophaeus
ENSACIG00000017871-9146.029ENSMAMG00000023908nuak28646.617Mastacembelus_armatus
ENSACIG00000017871-9560.997ENSMAMG00000010172si:ch211-117c9.18761.684Mastacembelus_armatus
ENSACIG00000017871-9050.588ENSMZEG00005011074nuak28350.394Maylandia_zebra
ENSACIG00000017871-9581.051ENSMZEG00005027060si:ch211-117c9.18781.051Maylandia_zebra
ENSACIG00000017871-6657.851ENSMGAG00000002936NUAK27957.576Meleagris_gallopavo
ENSACIG00000017871-9148.276ENSMAUG00000017535Nuak28446.029Mesocricetus_auratus
ENSACIG00000017871-9846.838ENSMICG00000000056NUAK28945.812Microcebus_murinus
ENSACIG00000017871-5563.946ENSMODG00000001769-8163.514Monodelphis_domestica
ENSACIG00000017871-9046.741ENSMALG00000018179nuak28346.542Monopterus_albus
ENSACIG00000017871-9157.191ENSMALG00000010356si:ch211-117c9.18956.444Monopterus_albus
ENSACIG00000017871-9148.639MGP_CAROLIEiJ_G0014585Nuak28447.610Mus_caroli
ENSACIG00000017871-9149.002ENSMUSG00000009772Nuak28447.826Mus_musculus
ENSACIG00000017871-9148.820MGP_SPRETEiJ_G0015392Nuak28947.826Mus_spretus
ENSACIG00000017871-9149.543ENSMLUG00000011425NUAK28048.629Myotis_lucifugus
ENSACIG00000017871-9051.491ENSNBRG00000006567nuak28351.297Neolamprologus_brichardi
ENSACIG00000017871-9379.087ENSNBRG00000020753si:ch211-117c9.18677.947Neolamprologus_brichardi
ENSACIG00000017871-9846.416ENSNLEG00000014473NUAK26666.904Nomascus_leucogenys
ENSACIG00000017871-9146.869ENSODEG00000006060NUAK26666.431Octodon_degus
ENSACIG00000017871-9079.113ENSONIG00000012465si:ch211-117c9.19979.113Oreochromis_niloticus
ENSACIG00000017871-9247.653ENSONIG00000018929nuak28847.948Oreochromis_niloticus
ENSACIG00000017871-8350.320ENSOCUG00000002318NUAK25866.784Oryctolagus_cuniculus
ENSACIG00000017871-9148.127ENSORLG00000000229nuak28448.302Oryzias_latipes
ENSACIG00000017871-9269.750ENSORLG00000023101si:ch211-117c9.18670.750Oryzias_latipes
ENSACIG00000017871-9271.000ENSORLG00020003401si:ch211-117c9.18671.000Oryzias_latipes_hni
ENSACIG00000017871-9052.024ENSORLG00020008332nuak28552.236Oryzias_latipes_hni
ENSACIG00000017871-9147.917ENSORLG00015000637nuak28348.289Oryzias_latipes_hsok
ENSACIG00000017871-9560.755ENSOMEG00000013190si:ch211-117c9.19362.069Oryzias_melastigma
ENSACIG00000017871-9048.381ENSOMEG00000015088nuak28348.375Oryzias_melastigma
ENSACIG00000017871-9149.222ENSOARG00000003826NUAK27849.222Ovis_aries
ENSACIG00000017871-9846.747ENSPPAG00000032571NUAK26666.904Pan_paniscus
ENSACIG00000017871-9149.818ENSPPRG00000013755NUAK28248.723Panthera_pardus
ENSACIG00000017871-8348.902ENSPTIG00000005428NUAK27447.705Panthera_tigris_altaica
ENSACIG00000017871-9846.747ENSPTRG00000001897NUAK26666.904Pan_troglodytes
ENSACIG00000017871-9049.228ENSPKIG00000001753nuak28147.985Paramormyrops_kingsleyae
ENSACIG00000017871-9046.568ENSPSIG00000009103NUAK28846.382Pelodiscus_sinensis
ENSACIG00000017871-9462.700ENSPMGG00000005991si:ch211-117c9.18764.179Periophthalmus_magnuspinnatus
ENSACIG00000017871-9147.273ENSPCIG00000004437NUAK28446.715Phascolarctos_cinereus
ENSACIG00000017871-9147.458ENSPFOG00000000376nuak28347.358Poecilia_formosa
ENSACIG00000017871-9560.720ENSPFOG00000009064-9765.280Poecilia_formosa
ENSACIG00000017871-9561.047ENSPLAG00000010229-8860.884Poecilia_latipinna
ENSACIG00000017871-9146.875ENSPLAG00000013584nuak28346.981Poecilia_latipinna
ENSACIG00000017871-9560.720ENSPMEG00000006856si:ch211-117c9.18860.720Poecilia_mexicana
ENSACIG00000017871-9147.081ENSPMEG00000004656nuak28346.981Poecilia_mexicana
ENSACIG00000017871-9261.448ENSPREG00000018548si:ch211-117c9.18661.279Poecilia_reticulata
ENSACIG00000017871-9146.324ENSPREG00000004466nuak28347.448Poecilia_reticulata
ENSACIG00000017871-9846.747ENSPPYG00000000307NUAK27166.904Pongo_abelii
ENSACIG00000017871-9146.655ENSPCAG00000015229NUAK28447.080Procavia_capensis
ENSACIG00000017871-9148.175ENSPCOG00000023513NUAK27847.263Propithecus_coquereli
ENSACIG00000017871-9047.802ENSPNYG00000007903nuak28248.588Pundamilia_nyererei
ENSACIG00000017871-9045.747ENSPNAG00000001964nuak28147.348Pygocentrus_nattereri
ENSACIG00000017871-9846.575ENSRBIG00000012566NUAK28446.062Rhinopithecus_bieti
ENSACIG00000017871-9846.575ENSRROG00000037807NUAK28446.062Rhinopithecus_roxellana
ENSACIG00000017871-9846.404ENSSBOG00000020563NUAK29045.205Saimiri_boliviensis_boliviensis
ENSACIG00000017871-9148.718ENSSHAG00000014222NUAK27848.529Sarcophilus_harrisii
ENSACIG00000017871-9048.456ENSSFOG00015016369nuak28748.456Scleropages_formosus
ENSACIG00000017871-9578.689ENSSMAG00000008945si:ch211-117c9.17878.689Scophthalmus_maximus
ENSACIG00000017871-9577.807ENSSDUG00000016779si:ch211-117c9.17778.075Seriola_dumerili
ENSACIG00000017871-9046.545ENSSDUG00000009077nuak28146.780Seriola_dumerili
ENSACIG00000017871-9093.548ENSSLDG00000025370-7778.202Seriola_lalandi_dorsalis
ENSACIG00000017871-9046.545ENSSLDG00000022806nuak28146.780Seriola_lalandi_dorsalis
ENSACIG00000017871-9145.081ENSSPUG00000014390NUAK28544.964Sphenodon_punctatus
ENSACIG00000017871-9048.302ENSSPAG00000013352nuak28247.727Stegastes_partitus
ENSACIG00000017871-9580.863ENSSPAG00000019755si:ch211-117c9.18080.863Stegastes_partitus
ENSACIG00000017871-9149.457ENSSSCG00000038471NUAK28948.913Sus_scrofa
ENSACIG00000017871-9557.586ENSTRUG00000020777si:ch211-117c9.18857.096Takifugu_rubripes
ENSACIG00000017871-9047.683ENSTRUG00000023948nuak28247.002Takifugu_rubripes
ENSACIG00000017871-9067.329ENSTNIG00000001456si:ch211-117c9.110067.148Tetraodon_nigroviridis
ENSACIG00000017871-7252.812ENSTTRG00000006600NUAK29151.589Tursiops_truncatus
ENSACIG00000017871-9146.041ENSUMAG00000003830NUAK28645.556Ursus_maritimus
ENSACIG00000017871-9148.718ENSVVUG00000013705NUAK28348.535Vulpes_vulpes
ENSACIG00000017871-9948.358ENSXETG00000000974nuak29447.653Xenopus_tropicalis
ENSACIG00000017871-9047.683ENSXCOG00000003678nuak210066.031Xiphophorus_couchianus
ENSACIG00000017871-9148.170ENSXMAG00000025530nuak28347.969Xiphophorus_maculatus
ENSACIG00000017871-9477.596ENSXMAG00000007457si:ch211-117c9.17777.596Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us