EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000017909 (Gene tree)
Gene ID: -
Gene Symbol: snrnp70
Alias: U1 small ribonucleoprotein 70kd|snrp70|wu:fc20b04|zgc:136450
Full Name: small nuclear ribonucleoprotein 70 (U1)
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 8703 bases
Position: chrCCOE01000089.1:424937-433639
Accession: ZDB-GENE-040825-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000023047	RRM_1	PF00076.22	6.2e-19	1	1
ENSACIP00000023047	U1snRNP70_N	PF12220.8	9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000023658	-	1407	-	ENSACIP00000023047	468 (aa)	-	-

Gene Model

Click here to download ENSACIG00000017909's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000017909's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000017909	snrnp70	100	88.421	ENSAOCG00000011672	snrnp70	100	89.053	Amphiprion_ocellaris
ENSACIG00000017909	snrnp70	100	85.957	ENSAPEG00000006219	snrnp70	100	85.021	Amphiprion_percula
ENSACIG00000017909	snrnp70	100	88.679	ENSACLG00000011144	snrnp70	100	86.316	Astatotilapia_calliptera
ENSACIG00000017909	snrnp70	54	47.876	WBGene00004390	rnp-7	56	51.064	Caenorhabditis_elegans
ENSACIG00000017909	snrnp70	100	77.707	ENSFHEG00000010298	snrnp70	100	77.966	Fundulus_heteroclitus
ENSACIG00000017909	snrnp70	100	91.915	ENSHBUG00000018856	snrnp70	100	88.085	Haplochromis_burtoni
ENSACIG00000017909	snrnp70	100	78.224	ENSHCOG00000010270	snrnp70	100	78.436	Hippocampus_comes
ENSACIG00000017909	snrnp70	100	89.407	ENSMAMG00000004556	snrnp70	100	89.619	Mastacembelus_armatus
ENSACIG00000017909	snrnp70	100	90.213	ENSMZEG00005022849	snrnp70	100	87.447	Maylandia_zebra
ENSACIG00000017909	snrnp70	74	92.197	ENSMALG00000002275	snrnp70	90	88.646	Monopterus_albus
ENSACIG00000017909	snrnp70	100	82.590	ENSORLG00000017158	snrnp70	100	82.590	Oryzias_latipes
ENSACIG00000017909	snrnp70	100	82.590	ENSORLG00015010817	snrnp70	100	82.590	Oryzias_latipes_hsok
ENSACIG00000017909	snrnp70	100	85.470	ENSOMEG00000013002	snrnp70	100	85.470	Oryzias_melastigma
ENSACIG00000017909	snrnp70	52	86.420	ENSPTRG00000011277	SNRNP70	99	87.805	Pan_troglodytes
ENSACIG00000017909	snrnp70	100	81.663	ENSPFOG00000016671	snrnp70	100	82.303	Poecilia_formosa
ENSACIG00000017909	snrnp70	100	81.450	ENSPLAG00000005912	snrnp70	100	82.090	Poecilia_latipinna
ENSACIG00000017909	snrnp70	100	81.663	ENSPMEG00000008496	snrnp70	100	82.303	Poecilia_mexicana
ENSACIG00000017909	snrnp70	100	81.450	ENSPREG00000005486	snrnp70	100	82.090	Poecilia_reticulata
ENSACIG00000017909	snrnp70	52	78.601	ENSPCOG00000023103	SNRNP70	84	78.601	Propithecus_coquereli
ENSACIG00000017909	snrnp70	100	92.340	ENSPNYG00000003258	snrnp70	100	88.511	Pundamilia_nyererei
ENSACIG00000017909	snrnp70	52	86.800	ENSSPUG00000016621	SNRNP70	52	92.793	Sphenodon_punctatus
ENSACIG00000017909	snrnp70	100	82.090	ENSTRUG00000009202	snrnp70	100	81.876	Takifugu_rubripes