EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000018280 (Gene tree)
Gene ID: -
Gene Symbol: prpf8
Alias: id:ibd1257|ik:tdsubc_2a9|im:7141966|tdsubc_2a9|wu:fb37c02|wu:fb73e06|xx:tdsubc_2a9|zgc:56504
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 14696 bases
Position: chrCCOE01000240.1:990256-1004951
Accession: ZDB-GENE-030131-577
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000023611	RRM_4	PF10598.9	2.9e-48	1	1
ENSACIP00000023611	U5_2-snRNA_bdg	PF10597.9	7.1e-74	1	1
ENSACIP00000023611	PRO8NT	PF08082.11	2.9e-87	1	1
ENSACIP00000023611	U6-snRNA_bdg	PF10596.9	1.7e-89	1	1
ENSACIP00000023611	PROCN	PF08083.11	4.8e-236	1	1
ENSACIP00000023611	PRP8_domainIV	PF12134.8	7.8e-101	1	1
ENSACIP00000023611	PROCT	PF08084.11	3.1e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000024229	-	7056	-	ENSACIP00000023611	2351 (aa)	-	-

Gene Model

Click here to download ENSACIG00000018280's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000018280's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000018280	prpf8	100	95.925	ENSG00000174231	PRPF8	100	95.549	Homo_sapiens
ENSACIG00000018280	prpf8	100	97.707	ENSAPOG00000010079	prpf8	100	97.707	Acanthochromis_polyacanthus
ENSACIG00000018280	prpf8	100	95.925	ENSAMEG00000007940	PRPF8	100	95.549	Ailuropoda_melanoleuca
ENSACIG00000018280	prpf8	100	97.665	ENSAOCG00000010725	prpf8	100	97.665	Amphiprion_ocellaris
ENSACIG00000018280	prpf8	100	97.665	ENSAPEG00000014397	prpf8	100	97.665	Amphiprion_percula
ENSACIG00000018280	prpf8	100	96.943	ENSATEG00000010062	prpf8	100	96.943	Anabas_testudineus
ENSACIG00000018280	prpf8	96	96.715	ENSAPLG00000010357	PRPF8	100	96.715	Anas_platyrhynchos
ENSACIG00000018280	prpf8	81	94.917	ENSACAG00000014784	PRPF8	99	94.917	Anolis_carolinensis
ENSACIG00000018280	prpf8	100	95.925	ENSANAG00000032629	PRPF8	100	95.549	Aotus_nancymaae
ENSACIG00000018280	prpf8	100	98.174	ENSACLG00000020858	prpf8	100	98.174	Astatotilapia_calliptera
ENSACIG00000018280	prpf8	100	97.028	ENSAMXG00000020291	prpf8	100	97.028	Astyanax_mexicanus
ENSACIG00000018280	prpf8	100	95.925	ENSBTAG00000011488	PRPF8	100	95.549	Bos_taurus
ENSACIG00000018280	prpf8	99	85.316	WBGene00004187	prp-8	99	85.757	Caenorhabditis_elegans
ENSACIG00000018280	prpf8	100	95.925	ENSCJAG00000001911	PRPF8	100	95.549	Callithrix_jacchus
ENSACIG00000018280	prpf8	100	95.925	ENSCAFG00000019221	PRPF8	100	95.549	Canis_familiaris
ENSACIG00000018280	prpf8	95	96.750	ENSCAFG00020009943	PRPF8	100	96.750	Canis_lupus_dingo
ENSACIG00000018280	prpf8	100	95.925	ENSCHIG00000017499	PRPF8	100	95.549	Capra_hircus
ENSACIG00000018280	prpf8	100	95.925	ENSTSYG00000014120	PRPF8	100	95.549	Carlito_syrichta
ENSACIG00000018280	prpf8	96	94.533	ENSCAPG00000009459	PRPF8	99	94.533	Cavia_aperea
ENSACIG00000018280	prpf8	100	95.925	ENSCPOG00000010379	PRPF8	100	95.549	Cavia_porcellus
ENSACIG00000018280	prpf8	100	95.925	ENSCCAG00000031983	-	100	95.549	Cebus_capucinus
ENSACIG00000018280	prpf8	100	95.925	ENSCATG00000038595	PRPF8	100	95.549	Cercocebus_atys
ENSACIG00000018280	prpf8	100	95.925	ENSCLAG00000004388	PRPF8	100	95.549	Chinchilla_lanigera
ENSACIG00000018280	prpf8	100	95.925	ENSCSAG00000013929	PRPF8	100	95.549	Chlorocebus_sabaeus
ENSACIG00000018280	prpf8	81	97.333	ENSCHOG00000008590	PRPF8	88	97.333	Choloepus_hoffmanni
ENSACIG00000018280	prpf8	100	95.881	ENSCPBG00000020409	PRPF8	100	95.881	Chrysemys_picta_bellii
ENSACIG00000018280	prpf8	98	93.230	ENSCSAVG00000007825	-	100	90.625	Ciona_savignyi
ENSACIG00000018280	prpf8	100	95.925	ENSCANG00000043088	PRPF8	100	95.549	Colobus_angolensis_palliatus
ENSACIG00000018280	prpf8	73	99.604	ENSCGRG00000005129	Prpf8	100	99.604	Cricetulus_griseus_crigri
ENSACIG00000018280	prpf8	100	97.240	ENSCSEG00000007905	prpf8	100	97.240	Cynoglossus_semilaevis
ENSACIG00000018280	prpf8	100	97.070	ENSDARG00000026180	prpf8	100	97.070	Danio_rerio
ENSACIG00000018280	prpf8	93	95.898	ENSDNOG00000018471	PRPF8	99	95.898	Dasypus_novemcinctus
ENSACIG00000018280	prpf8	84	95.930	ENSDORG00000006185	Prpf8	96	95.930	Dipodomys_ordii
ENSACIG00000018280	prpf8	99	90.004	FBgn0033688	Prp8	97	90.517	Drosophila_melanogaster
ENSACIG00000018280	prpf8	100	90.577	ENSETEG00000017592	PRPF8	100	90.577	Echinops_telfairi
ENSACIG00000018280	prpf8	98	92.721	ENSEBUG00000006548	prpf8	99	92.721	Eptatretus_burgeri
ENSACIG00000018280	prpf8	100	95.925	ENSEASG00005009514	PRPF8	99	97.027	Equus_asinus_asinus
ENSACIG00000018280	prpf8	97	96.798	ENSECAG00000021318	PRPF8	100	96.798	Equus_caballus
ENSACIG00000018280	prpf8	67	98.400	ENSEEUG00000012120	-	67	98.519	Erinaceus_europaeus
ENSACIG00000018280	prpf8	98	95.792	ENSELUG00000007120	prpf8	99	95.792	Esox_lucius
ENSACIG00000018280	prpf8	100	95.925	ENSFCAG00000006297	PRPF8	100	95.549	Felis_catus
ENSACIG00000018280	prpf8	100	95.966	ENSFALG00000006628	PRPF8	100	95.966	Ficedula_albicollis
ENSACIG00000018280	prpf8	100	95.925	ENSFDAG00000004711	PRPF8	100	95.549	Fukomys_damarensis
ENSACIG00000018280	prpf8	100	96.985	ENSFHEG00000021084	prpf8	100	96.985	Fundulus_heteroclitus
ENSACIG00000018280	prpf8	100	94.876	ENSGMOG00000002028	prpf8	99	94.876	Gadus_morhua
ENSACIG00000018280	prpf8	100	95.966	ENSGALG00000002943	PRPF8	100	95.966	Gallus_gallus
ENSACIG00000018280	prpf8	99	97.402	ENSGAFG00000010337	prpf8	99	97.402	Gambusia_affinis
ENSACIG00000018280	prpf8	100	97.282	ENSGACG00000008504	prpf8	100	97.147	Gasterosteus_aculeatus
ENSACIG00000018280	prpf8	100	95.968	ENSGAGG00000008350	PRPF8	100	95.968	Gopherus_agassizii
ENSACIG00000018280	prpf8	100	95.925	ENSGGOG00000005516	PRPF8	100	95.549	Gorilla_gorilla
ENSACIG00000018280	prpf8	100	97.495	ENSHBUG00000016192	prpf8	100	97.495	Haplochromis_burtoni
ENSACIG00000018280	prpf8	100	95.925	ENSHGLG00000012029	PRPF8	100	95.549	Heterocephalus_glaber_female
ENSACIG00000018280	prpf8	100	95.925	ENSHGLG00100016494	PRPF8	100	95.549	Heterocephalus_glaber_male
ENSACIG00000018280	prpf8	100	97.113	ENSHCOG00000016414	prpf8	100	97.113	Hippocampus_comes
ENSACIG00000018280	prpf8	100	96.900	ENSIPUG00000023230	prpf8	100	96.900	Ictalurus_punctatus
ENSACIG00000018280	prpf8	100	95.925	ENSSTOG00000005128	PRPF8	100	95.549	Ictidomys_tridecemlineatus
ENSACIG00000018280	prpf8	100	93.803	ENSJJAG00000021159	Prpf8	100	93.429	Jaculus_jaculus
ENSACIG00000018280	prpf8	99	97.444	ENSKMAG00000016118	prpf8	100	97.444	Kryptolebias_marmoratus
ENSACIG00000018280	prpf8	100	97.197	ENSLBEG00000026903	prpf8	100	97.197	Labrus_bergylta
ENSACIG00000018280	prpf8	95	93.470	ENSLACG00000010479	PRPF8	99	96.578	Latimeria_chalumnae
ENSACIG00000018280	prpf8	99	96.520	ENSLOCG00000005409	prpf8	99	96.520	Lepisosteus_oculatus
ENSACIG00000018280	prpf8	100	95.925	ENSLAFG00000015445	PRPF8	100	95.549	Loxodonta_africana
ENSACIG00000018280	prpf8	100	95.925	ENSMFAG00000039995	PRPF8	100	95.549	Macaca_fascicularis
ENSACIG00000018280	prpf8	100	95.925	ENSMMUG00000004820	PRPF8	100	95.549	Macaca_mulatta
ENSACIG00000018280	prpf8	100	95.925	ENSMNEG00000035713	PRPF8	100	95.549	Macaca_nemestrina
ENSACIG00000018280	prpf8	100	95.925	ENSMLEG00000037937	PRPF8	100	95.549	Mandrillus_leucophaeus
ENSACIG00000018280	prpf8	100	97.580	ENSMAMG00000008919	prpf8	100	97.580	Mastacembelus_armatus
ENSACIG00000018280	prpf8	100	98.174	ENSMZEG00005015073	prpf8	100	98.174	Maylandia_zebra
ENSACIG00000018280	prpf8	100	95.966	ENSMGAG00000004769	PRPF8	100	95.966	Meleagris_gallopavo
ENSACIG00000018280	prpf8	100	95.925	ENSMICG00000010320	PRPF8	100	95.549	Microcebus_murinus
ENSACIG00000018280	prpf8	100	95.925	ENSMOCG00000016838	Prpf8	100	95.549	Microtus_ochrogaster
ENSACIG00000018280	prpf8	100	96.985	ENSMMOG00000011887	prpf8	100	96.985	Mola_mola
ENSACIG00000018280	prpf8	100	95.840	ENSMODG00000010480	PRPF8	100	95.464	Monodelphis_domestica
ENSACIG00000018280	prpf8	97	96.157	ENSMALG00000003558	prpf8	100	96.157	Monopterus_albus
ENSACIG00000018280	prpf8	100	95.883	MGP_CAROLIEiJ_G0016740	Prpf8	100	95.507	Mus_caroli
ENSACIG00000018280	prpf8	100	95.883	ENSMUSG00000020850	Prpf8	100	95.507	Mus_musculus
ENSACIG00000018280	prpf8	100	95.840	MGP_PahariEiJ_G0017877	Prpf8	100	95.464	Mus_pahari
ENSACIG00000018280	prpf8	100	95.883	MGP_SPRETEiJ_G0017583	Prpf8	100	95.507	Mus_spretus
ENSACIG00000018280	prpf8	100	95.925	ENSMPUG00000013227	PRPF8	100	95.549	Mustela_putorius_furo
ENSACIG00000018280	prpf8	100	95.803	ENSMLUG00000002666	PRPF8	100	95.428	Myotis_lucifugus
ENSACIG00000018280	prpf8	100	94.185	ENSNGAG00000005305	Prpf8	100	93.811	Nannospalax_galili
ENSACIG00000018280	prpf8	100	98.217	ENSNBRG00000013127	prpf8	100	98.217	Neolamprologus_brichardi
ENSACIG00000018280	prpf8	97	94.720	ENSNLEG00000000897	PRPF8	98	94.720	Nomascus_leucogenys
ENSACIG00000018280	prpf8	98	94.883	ENSMEUG00000015999	PRPF8	100	94.883	Notamacropus_eugenii
ENSACIG00000018280	prpf8	100	94.185	ENSOPRG00000003102	PRPF8	100	93.811	Ochotona_princeps
ENSACIG00000018280	prpf8	100	95.925	ENSODEG00000008468	PRPF8	100	95.549	Octodon_degus
ENSACIG00000018280	prpf8	100	98.301	ENSONIG00000008153	prpf8	100	98.301	Oreochromis_niloticus
ENSACIG00000018280	prpf8	81	97.365	ENSOANG00000004250	PRPF8	97	97.365	Ornithorhynchus_anatinus
ENSACIG00000018280	prpf8	100	95.925	ENSOCUG00000000081	PRPF8	100	95.549	Oryctolagus_cuniculus
ENSACIG00000018280	prpf8	100	97.287	ENSORLG00000008036	prpf8	100	97.527	Oryzias_latipes
ENSACIG00000018280	prpf8	100	97.246	ENSORLG00020021070	prpf8	100	97.246	Oryzias_latipes_hni
ENSACIG00000018280	prpf8	100	97.287	ENSORLG00015002340	prpf8	100	97.287	Oryzias_latipes_hsok
ENSACIG00000018280	prpf8	100	95.846	ENSOMEG00000016866	prpf8	100	95.846	Oryzias_melastigma
ENSACIG00000018280	prpf8	100	95.803	ENSOARG00000013312	PRPF8	100	95.428	Ovis_aries
ENSACIG00000018280	prpf8	100	95.925	ENSPPAG00000042753	PRPF8	100	95.549	Pan_paniscus
ENSACIG00000018280	prpf8	100	95.925	ENSPPRG00000008746	PRPF8	100	95.549	Panthera_pardus
ENSACIG00000018280	prpf8	100	95.840	ENSPTIG00000019200	PRPF8	100	95.464	Panthera_tigris_altaica
ENSACIG00000018280	prpf8	100	95.925	ENSPTRG00000039576	PRPF8	100	95.549	Pan_troglodytes
ENSACIG00000018280	prpf8	98	96.792	ENSPANG00000024607	PRPF8	98	96.792	Papio_anubis
ENSACIG00000018280	prpf8	100	97.240	ENSPKIG00000011201	prpf8	100	97.240	Paramormyrops_kingsleyae
ENSACIG00000018280	prpf8	100	95.839	ENSPSIG00000013393	PRPF8	100	95.549	Pelodiscus_sinensis
ENSACIG00000018280	prpf8	100	95.925	ENSPEMG00000021699	Prpf8	100	95.549	Peromyscus_maniculatus_bairdii
ENSACIG00000018280	prpf8	96	92.444	ENSPMAG00000005438	prpf8	100	92.489	Petromyzon_marinus
ENSACIG00000018280	prpf8	100	95.840	ENSPCIG00000022603	PRPF8	100	96.661	Phascolarctos_cinereus
ENSACIG00000018280	prpf8	100	97.292	ENSPFOG00000007005	prpf8	100	97.292	Poecilia_formosa
ENSACIG00000018280	prpf8	100	95.499	ENSPLAG00000020777	prpf8	100	95.499	Poecilia_latipinna
ENSACIG00000018280	prpf8	100	97.292	ENSPMEG00000004051	prpf8	100	97.292	Poecilia_mexicana
ENSACIG00000018280	prpf8	100	97.292	ENSPREG00000021902	prpf8	100	97.292	Poecilia_reticulata
ENSACIG00000018280	prpf8	100	95.925	ENSPPYG00000007777	PRPF8	100	95.549	Pongo_abelii
ENSACIG00000018280	prpf8	88	96.782	ENSPCAG00000008938	PRPF8	88	96.782	Procavia_capensis
ENSACIG00000018280	prpf8	100	95.925	ENSPCOG00000015182	PRPF8	100	95.549	Propithecus_coquereli
ENSACIG00000018280	prpf8	93	96.794	ENSPVAG00000002134	PRPF8	93	96.794	Pteropus_vampyrus
ENSACIG00000018280	prpf8	100	97.495	ENSPNYG00000016356	prpf8	100	97.495	Pundamilia_nyererei
ENSACIG00000018280	prpf8	100	97.070	ENSPNAG00000009247	prpf8	100	97.070	Pygocentrus_nattereri
ENSACIG00000018280	prpf8	100	95.883	ENSRNOG00000003495	Prpf8	100	95.507	Rattus_norvegicus
ENSACIG00000018280	prpf8	100	95.925	ENSRBIG00000031219	PRPF8	100	96.305	Rhinopithecus_bieti
ENSACIG00000018280	prpf8	100	95.925	ENSRROG00000038014	PRPF8	100	96.305	Rhinopithecus_roxellana
ENSACIG00000018280	prpf8	98	61.073	YHR165C	PRP8	95	61.116	Saccharomyces_cerevisiae
ENSACIG00000018280	prpf8	100	95.925	ENSSBOG00000029717	PRPF8	100	95.549	Saimiri_boliviensis_boliviensis
ENSACIG00000018280	prpf8	100	95.798	ENSSHAG00000006167	PRPF8	100	95.422	Sarcophilus_harrisii
ENSACIG00000018280	prpf8	100	96.943	ENSSFOG00015013905	prpf8	100	96.943	Scleropages_formosus
ENSACIG00000018280	prpf8	100	97.240	ENSSMAG00000017736	prpf8	100	97.240	Scophthalmus_maximus
ENSACIG00000018280	prpf8	100	97.580	ENSSDUG00000003029	prpf8	100	97.580	Seriola_dumerili
ENSACIG00000018280	prpf8	68	97.567	ENSSLDG00000017096	prpf8	100	97.567	Seriola_lalandi_dorsalis
ENSACIG00000018280	prpf8	87	93.058	ENSSARG00000002892	PRPF8	87	93.058	Sorex_araneus
ENSACIG00000018280	prpf8	100	95.840	ENSSPUG00000007463	PRPF8	100	95.840	Sphenodon_punctatus
ENSACIG00000018280	prpf8	100	97.113	ENSSPAG00000015639	prpf8	100	97.113	Stegastes_partitus
ENSACIG00000018280	prpf8	100	95.925	ENSSSCG00000017817	PRPF8	100	95.549	Sus_scrofa
ENSACIG00000018280	prpf8	51	98.953	ENSTGUG00000015597	-	95	98.953	Taeniopygia_guttata
ENSACIG00000018280	prpf8	100	95.966	ENSTGUG00000005648	-	100	95.966	Taeniopygia_guttata
ENSACIG00000018280	prpf8	100	97.028	ENSTRUG00000015906	prpf8	100	97.028	Takifugu_rubripes
ENSACIG00000018280	prpf8	95	97.439	ENSTNIG00000003460	prpf8	99	97.439	Tetraodon_nigroviridis
ENSACIG00000018280	prpf8	93	99.047	ENSTBEG00000006431	PRPF8	93	99.047	Tupaia_belangeri
ENSACIG00000018280	prpf8	100	95.374	ENSTTRG00000006869	PRPF8	100	94.998	Tursiops_truncatus
ENSACIG00000018280	prpf8	55	95.479	ENSUAMG00000015644	-	96	96.000	Ursus_americanus
ENSACIG00000018280	prpf8	100	95.671	ENSUMAG00000009385	PRPF8	100	95.295	Ursus_maritimus
ENSACIG00000018280	prpf8	71	98.621	ENSVPAG00000006063	-	71	98.621	Vicugna_pacos
ENSACIG00000018280	prpf8	100	95.925	ENSVVUG00000021695	PRPF8	99	95.549	Vulpes_vulpes
ENSACIG00000018280	prpf8	99	96.639	ENSXETG00000022259	prpf8	99	96.680	Xenopus_tropicalis
ENSACIG00000018280	prpf8	100	97.197	ENSXCOG00000012775	prpf8	100	97.197	Xiphophorus_couchianus
ENSACIG00000018280	prpf8	100	97.155	ENSXMAG00000008505	prpf8	100	97.155	Xiphophorus_maculatus