EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000018326 (Gene tree)
Gene ID: -
Gene Symbol: smarcad1a
Alias: smarcad1|wu:fi25c01|zgc:113183
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1 a
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 13323 bases
Position: chrCCOE01000352.1:143967-157289
Accession: ZDB-GENE-050522-499
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000023724	ResIII	PF04851.15	5.9e-07	1	1
ENSACIP00000023716	ResIII	PF04851.15	6e-07	1	1
ENSACIP00000023673	ResIII	PF04851.15	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000024344	-	2298	-	ENSACIP00000023724	765 (aa)	-	-
ENSACIT00000024336	-	2139	-	ENSACIP00000023716	712 (aa)	-	-
ENSACIT00000024292	-	1923	-	ENSACIP00000023673	640 (aa)	-	-

Gene Model

Click here to download ENSACIG00000018326's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000018326's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000018326	smarcad1a	78	38.356	ENSACIG00000016982	smarca5	51	38.878
ENSACIG00000018326	smarcad1a	77	36.731	ENSACIG00000018996	hells	80	35.524
ENSACIG00000018326	smarcad1a	77	38.523	ENSACIG00000012023	-	94	36.028
ENSACIG00000018326	smarcad1a	78	35.503	ENSACIG00000001164	chd1l	51	36.957
ENSACIG00000018326	smarcad1a	76	30.962	ENSACIG00000013005	rad54b	52	31.161

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000018326	smarcad1a	100	68.587	ENSG00000163104	SMARCAD1	97	67.530	Homo_sapiens
ENSACIG00000018326	smarcad1a	100	92.000	ENSAPOG00000011446	smarcad1a	68	89.396	Acanthochromis_polyacanthus
ENSACIG00000018326	smarcad1a	100	68.401	ENSAMEG00000005844	SMARCAD1	67	68.401	Ailuropoda_melanoleuca
ENSACIG00000018326	smarcad1a	100	96.000	ENSAOCG00000019762	smarcad1a	62	96.000	Amphiprion_ocellaris
ENSACIG00000018326	smarcad1a	100	96.000	ENSAPEG00000003889	smarcad1a	62	96.000	Amphiprion_percula
ENSACIG00000018326	smarcad1a	98	96.000	ENSATEG00000015608	smarcad1a	77	91.329	Anabas_testudineus
ENSACIG00000018326	smarcad1a	87	67.200	ENSAPLG00000004630	SMARCAD1	72	69.346	Anas_platyrhynchos
ENSACIG00000018326	smarcad1a	100	68.224	ENSACAG00000013554	SMARCAD1	68	68.224	Anolis_carolinensis
ENSACIG00000018326	smarcad1a	100	68.401	ENSANAG00000020488	SMARCAD1	76	68.401	Aotus_nancymaae
ENSACIG00000018326	smarcad1a	97	92.481	ENSACLG00000017063	smarcad1a	72	92.481	Astatotilapia_calliptera
ENSACIG00000018326	smarcad1a	94	72.083	ENSAMXG00000019130	smarcad1b	80	71.787	Astyanax_mexicanus
ENSACIG00000018326	smarcad1a	97	76.604	ENSAMXG00000015470	smarcad1a	91	72.050	Astyanax_mexicanus
ENSACIG00000018326	smarcad1a	100	67.963	ENSBTAG00000017061	SMARCAD1	68	67.963	Bos_taurus
ENSACIG00000018326	smarcad1a	90	41.077	WBGene00010845	M03C11.8	71	38.828	Caenorhabditis_elegans
ENSACIG00000018326	smarcad1a	100	68.587	ENSCJAG00000006778	SMARCAD1	68	68.587	Callithrix_jacchus
ENSACIG00000018326	smarcad1a	100	68.587	ENSCAFG00000010026	SMARCAD1	68	68.587	Canis_familiaris
ENSACIG00000018326	smarcad1a	100	68.587	ENSCAFG00020003994	SMARCAD1	78	68.587	Canis_lupus_dingo
ENSACIG00000018326	smarcad1a	100	68.401	ENSCHIG00000012905	SMARCAD1	67	68.401	Capra_hircus
ENSACIG00000018326	smarcad1a	100	68.401	ENSTSYG00000002706	SMARCAD1	67	68.401	Carlito_syrichta
ENSACIG00000018326	smarcad1a	93	56.928	ENSCAPG00000016744	SMARCAD1	84	53.491	Cavia_aperea
ENSACIG00000018326	smarcad1a	100	68.773	ENSCPOG00000011398	SMARCAD1	67	68.773	Cavia_porcellus
ENSACIG00000018326	smarcad1a	100	68.587	ENSCCAG00000022264	SMARCAD1	97	67.703	Cebus_capucinus
ENSACIG00000018326	smarcad1a	100	68.587	ENSCATG00000035663	SMARCAD1	78	68.587	Cercocebus_atys
ENSACIG00000018326	smarcad1a	100	68.587	ENSCSAG00000004186	SMARCAD1	83	68.587	Chlorocebus_sabaeus
ENSACIG00000018326	smarcad1a	93	64.627	ENSCPBG00000013203	SMARCAD1	67	69.533	Chrysemys_picta_bellii
ENSACIG00000018326	smarcad1a	88	50.390	ENSCING00000001688	-	96	50.390	Ciona_intestinalis
ENSACIG00000018326	smarcad1a	100	68.587	ENSCANG00000003556	SMARCAD1	97	67.530	Colobus_angolensis_palliatus
ENSACIG00000018326	smarcad1a	100	68.216	ENSCGRG00001015056	Smarcad1	68	68.216	Cricetulus_griseus_chok1gshd
ENSACIG00000018326	smarcad1a	100	68.216	ENSCGRG00000014087	Smarcad1	68	68.216	Cricetulus_griseus_crigri
ENSACIG00000018326	smarcad1a	90	96.000	ENSCSEG00000014419	-	69	83.333	Cynoglossus_semilaevis
ENSACIG00000018326	smarcad1a	91	96.000	ENSCSEG00000017903	smarcad1a	66	83.658	Cynoglossus_semilaevis
ENSACIG00000018326	smarcad1a	89	75.710	ENSDARG00000073721	smarcad1b	82	65.557	Danio_rerio
ENSACIG00000018326	smarcad1a	88	77.820	ENSDARG00000014041	smarcad1a	66	74.419	Danio_rerio
ENSACIG00000018326	smarcad1a	99	68.401	ENSDNOG00000000806	-	67	68.401	Dasypus_novemcinctus
ENSACIG00000018326	smarcad1a	100	68.401	ENSDORG00000012331	Smarcad1	68	68.401	Dipodomys_ordii
ENSACIG00000018326	smarcad1a	87	46.264	FBgn0032157	Etl1	75	46.178	Drosophila_melanogaster
ENSACIG00000018326	smarcad1a	88	48.509	ENSEBUG00000003969	smarcad1a	97	48.243	Eptatretus_burgeri
ENSACIG00000018326	smarcad1a	100	68.401	ENSEASG00005012382	SMARCAD1	78	61.151	Equus_asinus_asinus
ENSACIG00000018326	smarcad1a	100	68.401	ENSECAG00000011562	SMARCAD1	67	68.401	Equus_caballus
ENSACIG00000018326	smarcad1a	95	70.392	ENSELUG00000019154	smarcad1b	70	75.624	Esox_lucius
ENSACIG00000018326	smarcad1a	94	80.714	ENSELUG00000018535	smarcad1a	69	80.149	Esox_lucius
ENSACIG00000018326	smarcad1a	100	68.587	ENSFCAG00000003958	SMARCAD1	97	67.530	Felis_catus
ENSACIG00000018326	smarcad1a	91	65.361	ENSFALG00000006089	SMARCAD1	68	69.533	Ficedula_albicollis
ENSACIG00000018326	smarcad1a	100	68.773	ENSFDAG00000017027	SMARCAD1	68	68.773	Fukomys_damarensis
ENSACIG00000018326	smarcad1a	97	83.537	ENSFHEG00000012778	smarcad1a	66	83.208	Fundulus_heteroclitus
ENSACIG00000018326	smarcad1a	95	81.818	ENSGMOG00000018995	smarcad1a	88	76.556	Gadus_morhua
ENSACIG00000018326	smarcad1a	100	67.724	ENSGALG00000037339	SMARCAD1	83	67.724	Gallus_gallus
ENSACIG00000018326	smarcad1a	89	84.360	ENSGAFG00000013498	smarcad1a	68	85.294	Gambusia_affinis
ENSACIG00000018326	smarcad1a	93	86.898	ENSGACG00000007327	smarcad1a	86	80.452	Gasterosteus_aculeatus
ENSACIG00000018326	smarcad1a	92	65.257	ENSGAGG00000008582	SMARCAD1	68	69.533	Gopherus_agassizii
ENSACIG00000018326	smarcad1a	100	68.587	ENSGGOG00000023001	SMARCAD1	68	68.587	Gorilla_gorilla
ENSACIG00000018326	smarcad1a	97	92.180	ENSHBUG00000011042	smarcad1a	70	92.180	Haplochromis_burtoni
ENSACIG00000018326	smarcad1a	100	68.773	ENSHGLG00000005070	SMARCAD1	67	68.773	Heterocephalus_glaber_female
ENSACIG00000018326	smarcad1a	100	68.773	ENSHGLG00100006812	SMARCAD1	67	68.773	Heterocephalus_glaber_male
ENSACIG00000018326	smarcad1a	93	77.861	ENSHCOG00000007848	smarcad1a	64	78.261	Hippocampus_comes
ENSACIG00000018326	smarcad1a	89	73.416	ENSIPUG00000000242	smarcad1a	67	73.820	Ictalurus_punctatus
ENSACIG00000018326	smarcad1a	89	73.386	ENSIPUG00000022817	smarcad1b	72	70.465	Ictalurus_punctatus
ENSACIG00000018326	smarcad1a	100	68.030	ENSSTOG00000001227	SMARCAD1	68	68.030	Ictidomys_tridecemlineatus
ENSACIG00000018326	smarcad1a	99	68.480	ENSJJAG00000022342	Smarcad1	67	68.480	Jaculus_jaculus
ENSACIG00000018326	smarcad1a	94	84.454	ENSKMAG00000021351	smarcad1a	76	82.286	Kryptolebias_marmoratus
ENSACIG00000018326	smarcad1a	94	86.677	ENSLBEG00000008088	smarcad1a	79	75.960	Labrus_bergylta
ENSACIG00000018326	smarcad1a	100	77.024	ENSLOCG00000012909	smarcad1a	70	77.024	Lepisosteus_oculatus
ENSACIG00000018326	smarcad1a	100	66.667	ENSLAFG00000000040	SMARCAD1	67	66.667	Loxodonta_africana
ENSACIG00000018326	smarcad1a	100	68.587	ENSMFAG00000042606	SMARCAD1	78	68.587	Macaca_fascicularis
ENSACIG00000018326	smarcad1a	100	68.587	ENSMMUG00000022242	SMARCAD1	78	68.587	Macaca_mulatta
ENSACIG00000018326	smarcad1a	100	68.587	ENSMNEG00000038117	SMARCAD1	97	67.530	Macaca_nemestrina
ENSACIG00000018326	smarcad1a	100	68.587	ENSMLEG00000038333	SMARCAD1	97	67.530	Mandrillus_leucophaeus
ENSACIG00000018326	smarcad1a	100	92.000	ENSMAMG00000000933	smarcad1a	67	89.189	Mastacembelus_armatus
ENSACIG00000018326	smarcad1a	97	92.331	ENSMZEG00005005203	smarcad1a	72	92.331	Maylandia_zebra
ENSACIG00000018326	smarcad1a	82	68.248	ENSMGAG00000005577	SMARCAD1	80	55.123	Meleagris_gallopavo
ENSACIG00000018326	smarcad1a	100	68.401	ENSMAUG00000008417	Smarcad1	68	68.401	Mesocricetus_auratus
ENSACIG00000018326	smarcad1a	100	68.519	ENSMICG00000009746	SMARCAD1	68	68.519	Microcebus_murinus
ENSACIG00000018326	smarcad1a	100	68.773	ENSMOCG00000017142	Smarcad1	68	68.773	Microtus_ochrogaster
ENSACIG00000018326	smarcad1a	95	90.093	ENSMMOG00000000275	smarcad1a	94	85.985	Mola_mola
ENSACIG00000018326	smarcad1a	87	67.628	ENSMODG00000019268	SMARCAD1	68	69.331	Monodelphis_domestica
ENSACIG00000018326	smarcad1a	100	68.401	MGP_CAROLIEiJ_G0028458	-	55	68.401	Mus_caroli
ENSACIG00000018326	smarcad1a	100	68.401	ENSMUSG00000029920	Smarcad1	68	68.401	Mus_musculus
ENSACIG00000018326	smarcad1a	100	68.401	MGP_PahariEiJ_G0022198	Smarcad1	68	68.401	Mus_pahari
ENSACIG00000018326	smarcad1a	100	68.401	MGP_SPRETEiJ_G0029462	Smarcad1	68	68.401	Mus_spretus
ENSACIG00000018326	smarcad1a	100	68.401	ENSMPUG00000002111	SMARCAD1	67	68.401	Mustela_putorius_furo
ENSACIG00000018326	smarcad1a	100	67.778	ENSMLUG00000000425	SMARCAD1	68	67.778	Myotis_lucifugus
ENSACIG00000018326	smarcad1a	100	68.030	ENSNGAG00000000810	Smarcad1	68	68.030	Nannospalax_galili
ENSACIG00000018326	smarcad1a	95	92.148	ENSNBRG00000012749	smarcad1a	84	89.586	Neolamprologus_brichardi
ENSACIG00000018326	smarcad1a	100	68.587	ENSNLEG00000014225	SMARCAD1	97	67.530	Nomascus_leucogenys
ENSACIG00000018326	smarcad1a	100	68.773	ENSODEG00000004334	SMARCAD1	67	68.773	Octodon_degus
ENSACIG00000018326	smarcad1a	100	92.910	ENSONIG00000015059	smarcad1a	77	87.946	Oreochromis_niloticus
ENSACIG00000018326	smarcad1a	87	68.530	ENSOANG00000013764	SMARCAD1	84	70.370	Ornithorhynchus_anatinus
ENSACIG00000018326	smarcad1a	100	68.216	ENSOCUG00000017283	SMARCAD1	68	68.216	Oryctolagus_cuniculus
ENSACIG00000018326	smarcad1a	100	86.252	ENSORLG00000004869	smarcad1a	70	86.252	Oryzias_latipes
ENSACIG00000018326	smarcad1a	100	86.252	ENSORLG00020020569	smarcad1a	70	86.252	Oryzias_latipes_hni
ENSACIG00000018326	smarcad1a	93	83.634	ENSORLG00015009045	smarcad1a	68	86.252	Oryzias_latipes_hsok
ENSACIG00000018326	smarcad1a	99	86.604	ENSOMEG00000023032	smarcad1a	68	86.604	Oryzias_melastigma
ENSACIG00000018326	smarcad1a	100	68.148	ENSOGAG00000011444	SMARCAD1	68	68.148	Otolemur_garnettii
ENSACIG00000018326	smarcad1a	100	68.401	ENSOARG00000017851	SMARCAD1	67	68.401	Ovis_aries
ENSACIG00000018326	smarcad1a	100	68.587	ENSPPAG00000035715	SMARCAD1	68	68.587	Pan_paniscus
ENSACIG00000018326	smarcad1a	100	68.587	ENSPPRG00000024756	SMARCAD1	97	67.530	Panthera_pardus
ENSACIG00000018326	smarcad1a	100	68.333	ENSPTIG00000017868	SMARCAD1	68	68.333	Panthera_tigris_altaica
ENSACIG00000018326	smarcad1a	100	68.587	ENSPTRG00000023126	SMARCAD1	97	67.530	Pan_troglodytes
ENSACIG00000018326	smarcad1a	100	66.543	ENSPANG00000019757	SMARCAD1	65	69.639	Papio_anubis
ENSACIG00000018326	smarcad1a	93	65.120	ENSPSIG00000010255	SMARCAD1	67	69.907	Pelodiscus_sinensis
ENSACIG00000018326	smarcad1a	89	80.907	ENSPMGG00000010735	smarcad1a	98	74.855	Periophthalmus_magnuspinnatus
ENSACIG00000018326	smarcad1a	100	52.308	ENSPEMG00000001854	Smarcad1	75	51.753	Peromyscus_maniculatus_bairdii
ENSACIG00000018326	smarcad1a	99	61.308	ENSPMAG00000003516	smarcad1a	69	61.308	Petromyzon_marinus
ENSACIG00000018326	smarcad1a	94	63.623	ENSPCIG00000008137	SMARCAD1	94	62.910	Phascolarctos_cinereus
ENSACIG00000018326	smarcad1a	93	84.511	ENSPFOG00000019116	smarcad1a	64	84.535	Poecilia_formosa
ENSACIG00000018326	smarcad1a	93	84.361	ENSPLAG00000000108	smarcad1a	64	84.384	Poecilia_latipinna
ENSACIG00000018326	smarcad1a	93	84.511	ENSPMEG00000009155	smarcad1a	64	84.535	Poecilia_mexicana
ENSACIG00000018326	smarcad1a	93	84.060	ENSPREG00000018185	smarcad1a	71	84.084	Poecilia_reticulata
ENSACIG00000018326	smarcad1a	100	67.718	ENSPPYG00000014935	SMARCAD1	68	67.718	Pongo_abelii
ENSACIG00000018326	smarcad1a	80	66.903	ENSPCOG00000020478	SMARCAD1	62	66.903	Propithecus_coquereli
ENSACIG00000018326	smarcad1a	100	67.784	ENSPVAG00000001760	SMARCAD1	67	67.784	Pteropus_vampyrus
ENSACIG00000018326	smarcad1a	95	91.111	ENSPNYG00000010087	smarcad1a	85	88.319	Pundamilia_nyererei
ENSACIG00000018326	smarcad1a	99	78.383	ENSPNAG00000001663	smarcad1a	73	78.383	Pygocentrus_nattereri
ENSACIG00000018326	smarcad1a	94	71.599	ENSPNAG00000010099	smarcad1b	75	78.719	Pygocentrus_nattereri
ENSACIG00000018326	smarcad1a	100	68.401	ENSRNOG00000006391	Smarcad1	68	68.401	Rattus_norvegicus
ENSACIG00000018326	smarcad1a	100	68.587	ENSRBIG00000041989	SMARCAD1	68	68.587	Rhinopithecus_bieti
ENSACIG00000018326	smarcad1a	100	68.587	ENSRROG00000035309	SMARCAD1	68	68.587	Rhinopithecus_roxellana
ENSACIG00000018326	smarcad1a	78	45.333	YAL019W	-	53	42.029	Saccharomyces_cerevisiae
ENSACIG00000018326	smarcad1a	100	68.587	ENSSBOG00000032114	SMARCAD1	97	67.703	Saimiri_boliviensis_boliviensis
ENSACIG00000018326	smarcad1a	87	67.949	ENSSHAG00000001279	SMARCAD1	68	69.703	Sarcophilus_harrisii
ENSACIG00000018326	smarcad1a	94	74.740	ENSSFOG00015016814	smarcad1b	69	74.851	Scleropages_formosus
ENSACIG00000018326	smarcad1a	93	71.704	ENSSFOG00015020909	smarcad1a	89	71.746	Scleropages_formosus
ENSACIG00000018326	smarcad1a	100	92.000	ENSSMAG00000001326	smarcad1a	68	92.000	Scophthalmus_maximus
ENSACIG00000018326	smarcad1a	93	89.339	ENSSDUG00000022338	smarcad1a	80	89.355	Seriola_dumerili
ENSACIG00000018326	smarcad1a	100	100.000	ENSSLDG00000024986	smarcad1a	66	88.156	Seriola_lalandi_dorsalis
ENSACIG00000018326	smarcad1a	82	69.720	ENSSPUG00000004633	SMARCAD1	97	69.204	Sphenodon_punctatus
ENSACIG00000018326	smarcad1a	100	96.000	ENSSPAG00000001970	smarcad1a	68	96.000	Stegastes_partitus
ENSACIG00000018326	smarcad1a	100	68.401	ENSSSCG00000009193	SMARCAD1	93	58.537	Sus_scrofa
ENSACIG00000018326	smarcad1a	100	69.159	ENSTGUG00000003127	SMARCAD1	89	69.159	Taeniopygia_guttata
ENSACIG00000018326	smarcad1a	93	86.254	ENSTNIG00000017585	smarcad1a	88	78.460	Tetraodon_nigroviridis
ENSACIG00000018326	smarcad1a	95	68.442	ENSTBEG00000002789	SMARCAD1	64	68.442	Tupaia_belangeri
ENSACIG00000018326	smarcad1a	100	67.904	ENSTTRG00000000226	SMARCAD1	69	67.904	Tursiops_truncatus
ENSACIG00000018326	smarcad1a	100	68.401	ENSUAMG00000022262	SMARCAD1	72	69.515	Ursus_americanus
ENSACIG00000018326	smarcad1a	100	68.401	ENSUMAG00000004549	SMARCAD1	67	68.401	Ursus_maritimus
ENSACIG00000018326	smarcad1a	100	68.401	ENSVVUG00000007271	SMARCAD1	94	58.172	Vulpes_vulpes
ENSACIG00000018326	smarcad1a	100	63.858	ENSXETG00000019214	smarcad1	80	63.858	Xenopus_tropicalis
ENSACIG00000018326	smarcad1a	94	83.433	ENSXCOG00000005232	smarcad1a	87	82.228	Xiphophorus_couchianus
ENSACIG00000018326	smarcad1a	92	85.294	ENSXMAG00000015350	smarcad1a	64	85.294	Xiphophorus_maculatus