EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000018355 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 4776 bases
Position: chrCCOE01001742.1:36294-41069
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000023640	DEAD	PF00270.29	2.4e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000024259	-	1362	-	ENSACIP00000023640	453 (aa)	-	-

Gene Model

Click here to download ENSACIG00000018355's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000018355's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000018355	-	79	32.080	ENSACIG00000020898	DDX39A	93	32.080
ENSACIG00000018355	-	64	30.284	ENSACIG00000007580	ddx55	53	30.284
ENSACIG00000018355	-	68	33.968	ENSACIG00000016665	zgc:193690	71	31.565
ENSACIG00000018355	-	74	33.333	ENSACIG00000000989	eif4a2	91	34.409
ENSACIG00000018355	-	63	32.646	ENSACIG00000022802	ddx47	59	32.646
ENSACIG00000018355	-	76	31.429	ENSACIG00000004534	ddx39b	94	31.354
ENSACIG00000018355	-	53	30.556	ENSACIG00000006502	DDX5	54	30.556
ENSACIG00000018355	-	70	30.183	ENSACIG00000007438	-	72	30.183
ENSACIG00000018355	-	73	31.135	ENSACIG00000014804	ddx19	82	31.135
ENSACIG00000018355	-	79	31.579	ENSACIG00000007948	-	93	31.579
ENSACIG00000018355	-	97	65.032	ENSACIG00000023989	ddx6	99	65.053
ENSACIG00000018355	-	67	30.128	ENSACIG00000001068	-	65	30.241
ENSACIG00000018355	-	75	32.540	ENSACIG00000009719	eif4a3	92	32.540

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000018355	-	75	88.267	ENSAPOG00000023627	-	95	88.267	Acanthochromis_polyacanthus
ENSACIG00000018355	-	98	80.544	ENSAPOG00000014829	ddx61	98	80.544	Acanthochromis_polyacanthus
ENSACIG00000018355	-	98	81.590	ENSAOCG00000007627	ddx61	98	81.590	Amphiprion_ocellaris
ENSACIG00000018355	-	100	89.366	ENSAOCG00000006269	-	100	89.366	Amphiprion_ocellaris
ENSACIG00000018355	-	100	89.366	ENSAPEG00000021368	-	100	89.366	Amphiprion_percula
ENSACIG00000018355	-	98	81.590	ENSAPEG00000007293	ddx61	98	81.590	Amphiprion_percula
ENSACIG00000018355	-	100	89.366	ENSAPEG00000020642	-	100	89.366	Amphiprion_percula
ENSACIG00000018355	-	97	81.607	ENSATEG00000011302	ddx61	99	80.720	Anabas_testudineus
ENSACIG00000018355	-	100	88.548	ENSATEG00000005424	-	100	88.548	Anabas_testudineus
ENSACIG00000018355	-	100	91.992	ENSACLG00000003260	-	100	91.992	Astatotilapia_calliptera
ENSACIG00000018355	-	99	80.498	ENSACLG00000027620	ddx61	99	80.498	Astatotilapia_calliptera
ENSACIG00000018355	-	97	80.042	ENSAMXG00000032542	ddx61	99	79.098	Astyanax_mexicanus
ENSACIG00000018355	-	99	81.443	ENSAMXG00000033980	-	98	81.443	Astyanax_mexicanus
ENSACIG00000018355	-	100	94.286	ENSCSEG00000009893	-	100	94.286	Cynoglossus_semilaevis
ENSACIG00000018355	-	100	85.276	ENSCVAG00000011006	-	100	85.276	Cyprinodon_variegatus
ENSACIG00000018355	-	97	79.873	ENSDARG00000018425	ddx61	98	79.873	Danio_rerio
ENSACIG00000018355	-	99	82.365	ENSELUG00000020545	ddx61	99	82.365	Esox_lucius
ENSACIG00000018355	-	99	83.027	ENSELUG00000022538	-	99	83.027	Esox_lucius
ENSACIG00000018355	-	100	92.308	ENSFHEG00000015487	-	100	92.308	Fundulus_heteroclitus
ENSACIG00000018355	-	71	88.073	ENSGMOG00000003561	-	100	88.754	Gadus_morhua
ENSACIG00000018355	-	96	81.342	ENSGMOG00000013762	ddx61	99	81.081	Gadus_morhua
ENSACIG00000018355	-	100	85.102	ENSGAFG00000015865	-	100	85.102	Gambusia_affinis
ENSACIG00000018355	-	99	87.967	ENSGACG00000002413	-	99	87.967	Gasterosteus_aculeatus
ENSACIG00000018355	-	98	79.424	ENSGACG00000003401	ddx61	100	79.424	Gasterosteus_aculeatus
ENSACIG00000018355	-	99	80.705	ENSHBUG00000017832	ddx61	99	80.705	Haplochromis_burtoni
ENSACIG00000018355	-	100	98.896	ENSHBUG00000017033	-	100	98.896	Haplochromis_burtoni
ENSACIG00000018355	-	100	90.110	ENSHCOG00000012238	-	100	90.110	Hippocampus_comes
ENSACIG00000018355	-	97	78.178	ENSHCOG00000008184	ddx61	97	78.178	Hippocampus_comes
ENSACIG00000018355	-	97	81.895	ENSIPUG00000008367	-	98	81.895	Ictalurus_punctatus
ENSACIG00000018355	-	96	79.274	ENSIPUG00000012823	DDX6	99	78.170	Ictalurus_punctatus
ENSACIG00000018355	-	100	88.090	ENSKMAG00000007213	-	100	88.090	Kryptolebias_marmoratus
ENSACIG00000018355	-	100	87.097	ENSLBEG00000016890	-	100	87.097	Labrus_bergylta
ENSACIG00000018355	-	97	81.184	ENSLBEG00000001740	ddx61	98	81.184	Labrus_bergylta
ENSACIG00000018355	-	98	77.593	ENSLACG00000015214	ddx61	100	77.593	Latimeria_chalumnae
ENSACIG00000018355	-	97	52.573	ENSLOCG00000004352	ddx61	97	53.244	Lepisosteus_oculatus
ENSACIG00000018355	-	99	80.412	ENSMAMG00000005321	ddx61	99	80.412	Mastacembelus_armatus
ENSACIG00000018355	-	100	88.776	ENSMAMG00000005559	-	100	88.776	Mastacembelus_armatus
ENSACIG00000018355	-	99	80.705	ENSMZEG00005003556	ddx61	99	80.705	Maylandia_zebra
ENSACIG00000018355	-	100	91.992	ENSMZEG00005026268	-	100	91.992	Maylandia_zebra
ENSACIG00000018355	-	96	80.000	ENSMMOG00000007415	ddx61	97	80.000	Mola_mola
ENSACIG00000018355	-	70	67.989	ENSMMOG00000008825	-	92	67.989	Mola_mola
ENSACIG00000018355	-	100	78.732	ENSMMOG00000013694	-	100	78.732	Mola_mola
ENSACIG00000018355	-	96	95.183	ENSMALG00000013817	-	96	95.183	Monopterus_albus
ENSACIG00000018355	-	97	82.921	ENSMALG00000013776	ddx61	96	82.921	Monopterus_albus
ENSACIG00000018355	-	100	98.896	ENSNBRG00000015075	-	100	98.896	Neolamprologus_brichardi
ENSACIG00000018355	-	98	87.162	ENSNBRG00000015800	ddx61	99	87.162	Neolamprologus_brichardi
ENSACIG00000018355	-	98	80.753	ENSONIG00000011418	ddx61	99	80.753	Oreochromis_niloticus
ENSACIG00000018355	-	100	92.197	ENSONIG00000013748	-	100	92.197	Oreochromis_niloticus
ENSACIG00000018355	-	100	86.653	ENSORLG00000009178	-	100	86.653	Oryzias_latipes
ENSACIG00000018355	-	100	86.858	ENSORLG00020015515	-	100	86.858	Oryzias_latipes_hni
ENSACIG00000018355	-	100	86.653	ENSORLG00015006764	-	100	86.653	Oryzias_latipes_hsok
ENSACIG00000018355	-	97	79.025	ENSOMEG00000022326	-	99	79.025	Oryzias_melastigma
ENSACIG00000018355	-	97	83.613	ENSPKIG00000024264	ddx61	98	83.160	Paramormyrops_kingsleyae
ENSACIG00000018355	-	100	89.648	ENSPMGG00000013355	-	100	89.648	Periophthalmus_magnuspinnatus
ENSACIG00000018355	-	100	85.685	ENSPFOG00000005750	-	100	85.685	Poecilia_formosa
ENSACIG00000018355	-	100	85.685	ENSPLAG00000000403	-	100	85.685	Poecilia_latipinna
ENSACIG00000018355	-	100	92.070	ENSPMEG00000023737	-	100	92.070	Poecilia_mexicana
ENSACIG00000018355	-	99	74.952	ENSPNYG00000015045	ddx61	99	74.952	Pundamilia_nyererei
ENSACIG00000018355	-	100	98.896	ENSPNYG00000003986	-	100	98.896	Pundamilia_nyererei
ENSACIG00000018355	-	98	80.208	ENSPNAG00000024072	ddx61	99	80.208	Pygocentrus_nattereri
ENSACIG00000018355	-	98	83.058	ENSPNAG00000008742	-	98	83.058	Pygocentrus_nattereri
ENSACIG00000018355	-	96	82.278	ENSSFOG00015021404	ddx61	97	81.705	Scleropages_formosus
ENSACIG00000018355	-	100	87.730	ENSSMAG00000001793	-	100	87.730	Scophthalmus_maximus
ENSACIG00000018355	-	96	81.237	ENSSMAG00000006591	ddx61	97	80.169	Scophthalmus_maximus
ENSACIG00000018355	-	100	89.796	ENSSDUG00000007530	-	100	89.796	Seriola_dumerili
ENSACIG00000018355	-	96	82.090	ENSSDUG00000009713	ddx61	99	79.918	Seriola_dumerili
ENSACIG00000018355	-	96	82.090	ENSSLDG00000000132	ddx61	99	79.918	Seriola_lalandi_dorsalis
ENSACIG00000018355	-	100	89.796	ENSSLDG00000007608	-	100	89.796	Seriola_lalandi_dorsalis
ENSACIG00000018355	-	100	90.184	ENSSPAG00000013878	-	100	90.184	Stegastes_partitus
ENSACIG00000018355	-	96	82.906	ENSSPAG00000001578	ddx61	99	80.992	Stegastes_partitus
ENSACIG00000018355	-	99	89.648	ENSTRUG00000012432	-	99	89.648	Takifugu_rubripes
ENSACIG00000018355	-	98	84.583	ENSTNIG00000003560	-	100	84.583	Tetraodon_nigroviridis
ENSACIG00000018355	-	100	75.714	ENSXCOG00000001406	-	100	75.714	Xiphophorus_couchianus
ENSACIG00000018355	-	100	85.510	ENSXMAG00000016090	-	100	85.510	Xiphophorus_maculatus