EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSACIG00000018366 (Gene tree)
Gene ID
-
Gene Symbol
pabpc1b
Alias
-
Full Name
poly A binding protein%2C cytoplasmic 1 b
Gene Type
protein_coding
Species
Amphilophus_citrinellus
Status
putative
Strand
Plus strand
Length
7079 bases
Position
chrCCOE01001698.1:1073928-1081006
Accession
ZDB-GENE-050308-1
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACIP00000023656PABPPF00658.184.3e-3211
ENSACIP00000023656RRM_5PF13893.62.6e-1012
ENSACIP00000023656RRM_5PF13893.62.6e-1022
ENSACIP00000023656RRM_1PF00076.221.2e-8914
ENSACIP00000023656RRM_1PF00076.221.2e-8924
ENSACIP00000023656RRM_1PF00076.221.2e-8934
ENSACIP00000023656RRM_1PF00076.221.2e-8944
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACIT00000024275-1872-ENSACIP00000023656623 (aa)--
Gene Model
Click here to download ENSACIG00000018366's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000018366's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSACIG00000018366pabpc1b5837.705ENSACIG00000018455sf3b45337.705
ENSACIG00000018366pabpc1b6036.145ENSACIG00000008793elavl48936.145
ENSACIG00000018366pabpc1b6034.043ENSACIG00000016186rbms2b7833.684
ENSACIG00000018366pabpc1b6030.208ENSACIG00000014376-7630.208
ENSACIG00000018366pabpc1b5634.091ENSACIG00000023843celf17134.884
ENSACIG00000018366pabpc1b9975.399ENSACIG00000023343pabpc49875.399
ENSACIG00000018366pabpc1b5434.091ENSACIG00000004318-5534.884
ENSACIG00000018366pabpc1b6036.000ENSACIG00000017780rbm197236.000
ENSACIG00000018366pabpc1b6139.744ENSACIG00000021116rbm39b7239.744
ENSACIG00000018366pabpc1b5931.447ENSACIG00000004161trnau1apa7131.447
ENSACIG00000018366pabpc1b6030.719ENSACIG00000024190elavl38930.719
ENSACIG00000018366pabpc1b10086.541ENSACIG00000004685pabpc1a10086.562
ENSACIG00000018366pabpc1b5436.047ENSACIG00000019405-5036.047
ENSACIG00000018366pabpc1b6037.349ENSACIG00000010855ELAVL210037.349
ENSACIG00000018366pabpc1b9868.998ENSACIG00000021004-9975.414
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACIG00000018366pabpc1b5978.571ENSG00000184388PABPC1L2B9878.571Homo_sapiens
ENSACIG00000018366pabpc1b5978.571ENSG00000186288PABPC1L2A9878.571Homo_sapiens
ENSACIG00000018366pabpc1b10086.228ENSAPOG00000015105pabpc1a10086.228Acanthochromis_polyacanthus
ENSACIG00000018366pabpc1b10093.419ENSAPOG00000017776pabpc1b10093.419Acanthochromis_polyacanthus
ENSACIG00000018366pabpc1b6078.571ENSAMEG00000019441-9878.571Ailuropoda_melanoleuca
ENSACIG00000018366pabpc1b10091.496ENSAOCG00000019839pabpc1b10091.496Amphiprion_ocellaris
ENSACIG00000018366pabpc1b10083.537ENSAOCG00000011656pabpc1a10086.228Amphiprion_ocellaris
ENSACIG00000018366pabpc1b10091.496ENSAPEG00000010435pabpc1b10091.496Amphiprion_percula
ENSACIG00000018366pabpc1b10083.537ENSAPEG00000006963pabpc1a10086.228Amphiprion_percula
ENSACIG00000018366pabpc1b10085.959ENSATEG00000024852pabpc1a10086.094Anabas_testudineus
ENSACIG00000018366pabpc1b10091.052ENSATEG00000012917pabpc1b10091.052Anabas_testudineus
ENSACIG00000018366pabpc1b5978.571ENSANAG00000019431-9878.571Aotus_nancymaae
ENSACIG00000018366pabpc1b5978.571ENSANAG00000019429-9878.571Aotus_nancymaae
ENSACIG00000018366pabpc1b10086.719ENSACLG00000009399pabpc1a10093.285Astatotilapia_calliptera
ENSACIG00000018366pabpc1b10091.654ENSACLG00000014335pabpc1b10091.654Astatotilapia_calliptera
ENSACIG00000018366pabpc1b10089.969ENSAMXG00000008599pabpc1b10089.969Astyanax_mexicanus
ENSACIG00000018366pabpc1b6077.561ENSBTAG00000050902-9877.561Bos_taurus
ENSACIG00000018366pabpc1b6075.598ENSBTAG00000052491-9875.598Bos_taurus
ENSACIG00000018366pabpc1b5978.571ENSCJAG00000041326-9878.571Callithrix_jacchus
ENSACIG00000018366pabpc1b6077.561ENSCAFG00020002052-9877.561Canis_lupus_dingo
ENSACIG00000018366pabpc1b5978.571ENSCHIG00000011138-9878.571Capra_hircus
ENSACIG00000018366pabpc1b5978.571ENSCHIG00000006283-9878.571Capra_hircus
ENSACIG00000018366pabpc1b5978.571ENSTSYG00000001775-9878.571Carlito_syrichta
ENSACIG00000018366pabpc1b6078.571ENSCPOG00000009525-9878.571Cavia_porcellus
ENSACIG00000018366pabpc1b5978.571ENSCCAG00000031524-9878.571Cebus_capucinus
ENSACIG00000018366pabpc1b5978.571ENSCATG00000042826-9878.571Cercocebus_atys
ENSACIG00000018366pabpc1b5978.571ENSCATG00000043125-9878.571Cercocebus_atys
ENSACIG00000018366pabpc1b5977.551ENSCLAG00000017412-9877.551Chinchilla_lanigera
ENSACIG00000018366pabpc1b5977.551ENSCLAG00000017409-9877.551Chinchilla_lanigera
ENSACIG00000018366pabpc1b6078.571ENSCSAG00000000102-9878.571Chlorocebus_sabaeus
ENSACIG00000018366pabpc1b5979.006ENSCGRG00001023387-9677.320Cricetulus_griseus_chok1gshd
ENSACIG00000018366pabpc1b10086.929ENSCSEG00000015241-10086.929Cynoglossus_semilaevis
ENSACIG00000018366pabpc1b9985.070ENSCSEG00000013324pabpc1a9987.025Cynoglossus_semilaevis
ENSACIG00000018366pabpc1b10086.094ENSCVAG00000021872pabpc1a10085.938Cyprinodon_variegatus
ENSACIG00000018366pabpc1b10087.365ENSCVAG00000005489pabpc1b10087.365Cyprinodon_variegatus
ENSACIG00000018366pabpc1b10089.308ENSDARG00000021140pabpc1b9993.617Danio_rerio
ENSACIG00000018366pabpc1b10084.462ENSDARG00000017219pabpc1a10086.719Danio_rerio
ENSACIG00000018366pabpc1b6079.365ENSDNOG00000030926-9877.041Dasypus_novemcinctus
ENSACIG00000018366pabpc1b5977.041ENSDORG00000011362-9877.041Dipodomys_ordii
ENSACIG00000018366pabpc1b6077.184ENSEASG00005010399-9877.184Equus_asinus_asinus
ENSACIG00000018366pabpc1b6077.184ENSECAG00000002620-9877.184Equus_caballus
ENSACIG00000018366pabpc1b6073.980ENSEEUG00000008203-9873.980Erinaceus_europaeus
ENSACIG00000018366pabpc1b9986.813ENSELUG00000003614pabpc1a10086.813Esox_lucius
ENSACIG00000018366pabpc1b10088.245ENSELUG00000015062-10088.245Esox_lucius
ENSACIG00000018366pabpc1b6059.052ENSELUG00000005389-9759.052Esox_lucius
ENSACIG00000018366pabpc1b5978.571ENSFCAG00000039701-9878.571Felis_catus
ENSACIG00000018366pabpc1b6078.571ENSFDAG00000005484-9878.571Fukomys_damarensis
ENSACIG00000018366pabpc1b10086.883ENSFHEG00000008186pabpc1b10087.809Fundulus_heteroclitus
ENSACIG00000018366pabpc1b10085.915ENSFHEG00000018979pabpc1a10086.072Fundulus_heteroclitus
ENSACIG00000018366pabpc1b9985.340ENSGMOG00000013448pabpc1a10085.208Gadus_morhua
ENSACIG00000018366pabpc1b8996.560ENSGMOG00000002448-8696.560Gadus_morhua
ENSACIG00000018366pabpc1b10085.491ENSGAFG00000019750pabpc1a10085.647Gambusia_affinis
ENSACIG00000018366pabpc1b10089.905ENSGAFG00000010193pabpc1b10089.905Gambusia_affinis
ENSACIG00000018366pabpc1b10086.223ENSGACG00000003771pabpc1b10087.752Gasterosteus_aculeatus
ENSACIG00000018366pabpc1b10086.698ENSGACG00000003572pabpc1a10086.698Gasterosteus_aculeatus
ENSACIG00000018366pabpc1b5978.571ENSGGOG00000043933-9878.571Gorilla_gorilla
ENSACIG00000018366pabpc1b5978.571ENSGGOG00000038606-9878.571Gorilla_gorilla
ENSACIG00000018366pabpc1b10092.937ENSHBUG00000002075pabpc1b10092.628Haplochromis_burtoni
ENSACIG00000018366pabpc1b10086.719ENSHBUG00000020487pabpc1a10093.285Haplochromis_burtoni
ENSACIG00000018366pabpc1b5978.571ENSHGLG00000019668-9878.571Heterocephalus_glaber_female
ENSACIG00000018366pabpc1b5978.571ENSHGLG00000019762-9878.571Heterocephalus_glaber_female
ENSACIG00000018366pabpc1b5978.571ENSHGLG00100020854-9878.571Heterocephalus_glaber_male
ENSACIG00000018366pabpc1b10085.759ENSHCOG00000013502pabpc1a10085.915Hippocampus_comes
ENSACIG00000018366pabpc1b9871.197ENSHCOG00000003175pabpc1b9970.921Hippocampus_comes
ENSACIG00000018366pabpc1b6355.224ENSIPUG00000018724-6855.224Ictalurus_punctatus
ENSACIG00000018366pabpc1b10084.409ENSIPUG00000008848pabpc1a10084.409Ictalurus_punctatus
ENSACIG00000018366pabpc1b6164.567ENSIPUG00000021244-5564.567Ictalurus_punctatus
ENSACIG00000018366pabpc1b10088.057ENSIPUG00000010791-10088.057Ictalurus_punctatus
ENSACIG00000018366pabpc1b6079.082ENSSTOG00000022096-9879.082Ictidomys_tridecemlineatus
ENSACIG00000018366pabpc1b6079.082ENSSTOG00000026028-9879.082Ictidomys_tridecemlineatus
ENSACIG00000018366pabpc1b5978.061ENSJJAG00000007037-9878.061Jaculus_jaculus
ENSACIG00000018366pabpc1b10085.959ENSKMAG00000000605pabpc1a10085.803Kryptolebias_marmoratus
ENSACIG00000018366pabpc1b10088.925ENSKMAG00000008049pabpc1b10088.819Kryptolebias_marmoratus
ENSACIG00000018366pabpc1b10085.915ENSLBEG00000024002-10085.915Labrus_bergylta
ENSACIG00000018366pabpc1b10090.221ENSLBEG00000026845pabpc1b10090.221Labrus_bergylta
ENSACIG00000018366pabpc1b6077.949ENSLAFG00000023096-9877.949Loxodonta_africana
ENSACIG00000018366pabpc1b5978.173ENSMFAG00000028878-9878.173Macaca_fascicularis
ENSACIG00000018366pabpc1b5978.571ENSMMUG00000039929-9878.571Macaca_mulatta
ENSACIG00000018366pabpc1b5978.571ENSMMUG00000037681-9878.571Macaca_mulatta
ENSACIG00000018366pabpc1b5978.571ENSMMUG00000009740-9878.571Macaca_mulatta
ENSACIG00000018366pabpc1b5978.571ENSMNEG00000037732-9878.571Macaca_nemestrina
ENSACIG00000018366pabpc1b5978.571ENSMLEG00000027495-9878.571Mandrillus_leucophaeus
ENSACIG00000018366pabpc1b10085.803ENSMAMG00000004502-10092.566Mastacembelus_armatus
ENSACIG00000018366pabpc1b10091.339ENSMAMG00000014610pabpc1b10091.339Mastacembelus_armatus
ENSACIG00000018366pabpc1b10086.719ENSMZEG00005025416pabpc1a10093.285Maylandia_zebra
ENSACIG00000018366pabpc1b10091.654ENSMZEG00005026745pabpc1b10091.654Maylandia_zebra
ENSACIG00000018366pabpc1b5978.571ENSMICG00000047642-9878.571Microcebus_murinus
ENSACIG00000018366pabpc1b10085.554ENSMMOG00000018044pabpc1a10091.847Mola_mola
ENSACIG00000018366pabpc1b10090.369ENSMMOG00000018009pabpc1b10090.530Mola_mola
ENSACIG00000018366pabpc1b9872.293ENSMODG00000013156-9872.611Monodelphis_domestica
ENSACIG00000018366pabpc1b9965.348ENSMODG00000015024-9965.348Monodelphis_domestica
ENSACIG00000018366pabpc1b10087.319ENSMALG00000006066pabpc1b10087.159Monopterus_albus
ENSACIG00000018366pabpc1b10086.517ENSMALG00000013020-10086.838Monopterus_albus
ENSACIG00000018366pabpc1b5980.874ENSNGAG00000012688-9878.061Nannospalax_galili
ENSACIG00000018366pabpc1b10091.339ENSNBRG00000013737pabpc1b10091.339Neolamprologus_brichardi
ENSACIG00000018366pabpc1b10086.698ENSNBRG00000003068-10093.285Neolamprologus_brichardi
ENSACIG00000018366pabpc1b5978.571ENSNLEG00000018128-9878.571Nomascus_leucogenys
ENSACIG00000018366pabpc1b5978.061ENSODEG00000018540-9878.061Octodon_degus
ENSACIG00000018366pabpc1b10091.654ENSONIG00000002717pabpc1b10091.654Oreochromis_niloticus
ENSACIG00000018366pabpc1b10086.207ENSONIG00000006871-10086.207Oreochromis_niloticus
ENSACIG00000018366pabpc1b6078.571ENSOCUG00000002565-9878.571Oryctolagus_cuniculus
ENSACIG00000018366pabpc1b10082.835ENSORLG00000003008-10082.835Oryzias_latipes
ENSACIG00000018366pabpc1b10084.555ENSORLG00000002691pabpc1a10093.243Oryzias_latipes
ENSACIG00000018366pabpc1b10084.555ENSORLG00020022398pabpc1a10085.023Oryzias_latipes_hni
ENSACIG00000018366pabpc1b10082.677ENSORLG00020022259-10082.677Oryzias_latipes_hni
ENSACIG00000018366pabpc1b10082.835ENSORLG00015010932-10082.835Oryzias_latipes_hsok
ENSACIG00000018366pabpc1b10084.555ENSORLG00015013633pabpc110085.023Oryzias_latipes_hsok
ENSACIG00000018366pabpc1b9973.913ENSOMEG00000013627pabpc1b10086.779Oryzias_melastigma
ENSACIG00000018366pabpc1b10085.023ENSOMEG00000020219pabpc1a10085.133Oryzias_melastigma
ENSACIG00000018366pabpc1b6078.571ENSOGAG00000029513-9878.571Otolemur_garnettii
ENSACIG00000018366pabpc1b6078.571ENSOGAG00000026047-9878.571Otolemur_garnettii
ENSACIG00000018366pabpc1b6078.571ENSOARG00000005943-9878.571Ovis_aries
ENSACIG00000018366pabpc1b5978.571ENSPPAG00000012920-9878.571Pan_paniscus
ENSACIG00000018366pabpc1b6078.571ENSPPRG00000011809-9878.571Panthera_pardus
ENSACIG00000018366pabpc1b6078.571ENSPPRG00000011804-9878.571Panthera_pardus
ENSACIG00000018366pabpc1b5978.571ENSPTRG00000028252-9878.571Pan_troglodytes
ENSACIG00000018366pabpc1b5978.571ENSPANG00000011549-9878.571Papio_anubis
ENSACIG00000018366pabpc1b10091.038ENSPKIG00000005676pabpc1b10090.881Paramormyrops_kingsleyae
ENSACIG00000018366pabpc1b7391.391ENSPMGG00000023134-9891.391Periophthalmus_magnuspinnatus
ENSACIG00000018366pabpc1b7885.685ENSPMGG00000022487pabpc1a9688.627Periophthalmus_magnuspinnatus
ENSACIG00000018366pabpc1b9969.936ENSPCIG00000016995-5569.745Phascolarctos_cinereus
ENSACIG00000018366pabpc1b10085.100ENSPFOG00000010815pabpc1a10085.253Poecilia_formosa
ENSACIG00000018366pabpc1b10087.037ENSPFOG00000005917pabpc1b10089.590Poecilia_formosa
ENSACIG00000018366pabpc1b10086.115ENSPLAG00000004114pabpc1a10086.228Poecilia_latipinna
ENSACIG00000018366pabpc1b10087.346ENSPLAG00000001388pabpc1b10089.905Poecilia_latipinna
ENSACIG00000018366pabpc1b10087.037ENSPMEG00000014399pabpc1b10089.590Poecilia_mexicana
ENSACIG00000018366pabpc1b10086.115ENSPMEG00000001334pabpc1a10086.228Poecilia_mexicana
ENSACIG00000018366pabpc1b10088.283ENSPREG00000019595pabpc1a10092.806Poecilia_reticulata
ENSACIG00000018366pabpc1b10087.346ENSPREG00000010911pabpc1b10089.905Poecilia_reticulata
ENSACIG00000018366pabpc1b6078.571ENSPPYG00000020468-9878.571Pongo_abelii
ENSACIG00000018366pabpc1b6078.571ENSPCAG00000005308-9878.571Procavia_capensis
ENSACIG00000018366pabpc1b5979.082ENSPCOG00000026349-9879.082Propithecus_coquereli
ENSACIG00000018366pabpc1b6578.974ENSPVAG00000016117-9878.974Pteropus_vampyrus
ENSACIG00000018366pabpc1b10086.719ENSPNYG00000005192pabpc1a10087.458Pundamilia_nyererei
ENSACIG00000018366pabpc1b10092.937ENSPNYG00000012578pabpc1b10092.628Pundamilia_nyererei
ENSACIG00000018366pabpc1b10089.308ENSPNAG00000024626pabpc1b10089.308Pygocentrus_nattereri
ENSACIG00000018366pabpc1b10086.185ENSPNAG00000028408pabpc1a10086.185Pygocentrus_nattereri
ENSACIG00000018366pabpc1b5978.571ENSRBIG00000027173-9878.571Rhinopithecus_bieti
ENSACIG00000018366pabpc1b9972.167ENSRBIG00000028738-9586.444Rhinopithecus_bieti
ENSACIG00000018366pabpc1b5978.571ENSRROG00000017404-9878.571Rhinopithecus_roxellana
ENSACIG00000018366pabpc1b9861.920ENSSHAG00000000511-10061.920Sarcophilus_harrisii
ENSACIG00000018366pabpc1b10086.072ENSSFOG00015006662pabpc1a10086.072Scleropages_formosus
ENSACIG00000018366pabpc1b10090.079ENSSFOG00015002752-10090.079Scleropages_formosus
ENSACIG00000018366pabpc1b5979.769ENSSFOG00015019668-6679.769Scleropages_formosus
ENSACIG00000018366pabpc1b10085.871ENSSMAG00000010803pabpc1a10085.871Scophthalmus_maximus
ENSACIG00000018366pabpc1b10090.709ENSSMAG00000006869pabpc1b10090.709Scophthalmus_maximus
ENSACIG00000018366pabpc1b10090.881ENSSDUG00000011965pabpc1b10091.038Seriola_dumerili
ENSACIG00000018366pabpc1b10086.115ENSSDUG00000006675pabpc1a10086.094Seriola_dumerili
ENSACIG00000018366pabpc1b10091.080ENSSLDG00000014156pabpc1b10091.080Seriola_lalandi_dorsalis
ENSACIG00000018366pabpc1b10086.115ENSSLDG00000011661pabpc1a10086.094Seriola_lalandi_dorsalis
ENSACIG00000018366pabpc1b10085.915ENSSPAG00000014453-10086.072Stegastes_partitus
ENSACIG00000018366pabpc1b10091.956ENSSPAG00000019265pabpc1b10091.956Stegastes_partitus
ENSACIG00000018366pabpc1b5978.571ENSSSCG00000032167-9878.571Sus_scrofa
ENSACIG00000018366pabpc1b5978.571ENSSSCG00000036336-9878.571Sus_scrofa
ENSACIG00000018366pabpc1b10085.670ENSTRUG00000003767-10085.824Takifugu_rubripes
ENSACIG00000018366pabpc1b10084.938ENSTRUG00000011577-10084.938Takifugu_rubripes
ENSACIG00000018366pabpc1b10086.991ENSTNIG00000009153pabpc1b10086.991Tetraodon_nigroviridis
ENSACIG00000018366pabpc1b10083.153ENSTNIG00000013307pabpc1a10083.153Tetraodon_nigroviridis
ENSACIG00000018366pabpc1b6078.571ENSTTRG00000013181-9878.571Tursiops_truncatus
ENSACIG00000018366pabpc1b5978.571ENSUAMG00000008089-9878.571Ursus_americanus
ENSACIG00000018366pabpc1b9653.909ENSUMAG00000023926-8968.232Ursus_maritimus
ENSACIG00000018366pabpc1b5978.571ENSUMAG00000003364-9878.571Ursus_maritimus
ENSACIG00000018366pabpc1b6077.500ENSVVUG00000015892-9777.500Vulpes_vulpes
ENSACIG00000018366pabpc1b9944.804ENSXETG00000015439-10044.749Xenopus_tropicalis
ENSACIG00000018366pabpc1b10086.508ENSXCOG00000019901pabpc1b10086.349Xiphophorus_couchianus
ENSACIG00000018366pabpc1b10087.480ENSXCOG00000017066pabpc1a10087.640Xiphophorus_couchianus
ENSACIG00000018366pabpc1b10087.640ENSXMAG00000002555pabpc1a10087.801Xiphophorus_maculatus
ENSACIG00000018366pabpc1b10087.963ENSXMAG00000003753pabpc1b10089.905Xiphophorus_maculatus

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