EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000018413 (Gene tree)
Gene ID: -
Gene Symbol: cpsf6
Alias: wu:fa22f12|zgc:85819
Full Name: cleavage and polyadenylation specific factor 6
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 6478 bases
Position: chrCCOE01000389.1:2088677-2095154
Accession: ZDB-GENE-030131-5277
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000023712	RRM_1	PF00076.22	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000024332	-	1722	-	ENSACIP00000023712	573 (aa)	-	-

Gene Model

Click here to download ENSACIG00000018413's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000018413's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000018413	cpsf6	95	39.716	ENSG00000149532	CPSF7	100	49.333	Homo_sapiens
ENSACIG00000018413	cpsf6	100	92.670	ENSAOCG00000017865	cpsf6	100	92.670	Amphiprion_ocellaris
ENSACIG00000018413	cpsf6	56	40.625	ENSAOCG00000012357	CPSF7	62	53.333	Amphiprion_ocellaris
ENSACIG00000018413	cpsf6	56	39.873	ENSAPEG00000015375	CPSF7	62	53.333	Amphiprion_percula
ENSACIG00000018413	cpsf6	94	37.633	ENSANAG00000024635	CPSF7	69	50.000	Aotus_nancymaae
ENSACIG00000018413	cpsf6	95	49.265	ENSAMXG00000016745	CPSF6	75	92.121	Astyanax_mexicanus
ENSACIG00000018413	cpsf6	95	39.894	ENSBTAG00000015263	CPSF7	71	55.114	Bos_taurus
ENSACIG00000018413	cpsf6	95	40.248	ENSCJAG00000019282	CPSF7	79	60.544	Callithrix_jacchus
ENSACIG00000018413	cpsf6	95	40.426	ENSCAFG00000016152	CPSF7	71	55.682	Canis_familiaris
ENSACIG00000018413	cpsf6	72	81.529	ENSCAFG00000000424	CPSF6	95	78.519	Canis_familiaris
ENSACIG00000018413	cpsf6	95	39.894	ENSCAFG00020012753	CPSF7	71	55.682	Canis_lupus_dingo
ENSACIG00000018413	cpsf6	95	39.894	ENSCHIG00000014655	CPSF7	71	55.114	Capra_hircus
ENSACIG00000018413	cpsf6	95	39.894	ENSTSYG00000010138	-	71	55.682	Carlito_syrichta
ENSACIG00000018413	cpsf6	51	58.696	ENSTSYG00000008591	CPSF6	91	78.479	Carlito_syrichta
ENSACIG00000018413	cpsf6	85	39.157	ENSCAPG00000006384	CPSF7	68	58.140	Cavia_aperea
ENSACIG00000018413	cpsf6	88	40.272	ENSCPOG00000009980	CPSF7	71	58.140	Cavia_porcellus
ENSACIG00000018413	cpsf6	95	39.716	ENSCCAG00000032367	CPSF7	71	55.114	Cebus_capucinus
ENSACIG00000018413	cpsf6	95	40.248	ENSCATG00000042801	CPSF7	73	55.114	Cercocebus_atys
ENSACIG00000018413	cpsf6	88	40.272	ENSCLAG00000003174	CPSF7	71	57.558	Chinchilla_lanigera
ENSACIG00000018413	cpsf6	95	38.801	ENSCSAG00000006414	CPSF7	73	55.114	Chlorocebus_sabaeus
ENSACIG00000018413	cpsf6	95	40.071	ENSCGRG00001020382	Cpsf7	71	58.721	Cricetulus_griseus_chok1gshd
ENSACIG00000018413	cpsf6	95	39.330	ENSCGRG00000017954	Cpsf7	73	58.721	Cricetulus_griseus_crigri
ENSACIG00000018413	cpsf6	50	40.206	ENSCSEG00000001956	CPSF7	57	44.755	Cynoglossus_semilaevis
ENSACIG00000018413	cpsf6	95	90.792	ENSCSEG00000008967	cpsf6	95	87.027	Cynoglossus_semilaevis
ENSACIG00000018413	cpsf6	67	34.842	ENSCVAG00000007392	CPSF7	81	38.647	Cyprinodon_variegatus
ENSACIG00000018413	cpsf6	95	39.894	ENSDNOG00000018517	CPSF7	79	61.224	Dasypus_novemcinctus
ENSACIG00000018413	cpsf6	62	51.042	ENSETEG00000003765	CPSF7	71	56.725	Echinops_telfairi
ENSACIG00000018413	cpsf6	66	81.567	ENSETEG00000002097	CPSF6	82	75.625	Echinops_telfairi
ENSACIG00000018413	cpsf6	95	39.894	ENSEASG00005008196	CPSF7	71	55.682	Equus_asinus_asinus
ENSACIG00000018413	cpsf6	80	36.441	ENSECAG00000018521	CPSF7	81	61.224	Equus_caballus
ENSACIG00000018413	cpsf6	95	40.636	ENSFCAG00000013677	CPSF7	81	61.224	Felis_catus
ENSACIG00000018413	cpsf6	68	46.667	ENSFALG00000011927	CPSF7	76	54.651	Ficedula_albicollis
ENSACIG00000018413	cpsf6	62	55.208	ENSFDAG00000003919	CPSF7	71	56.818	Fukomys_damarensis
ENSACIG00000018413	cpsf6	54	85.852	ENSFHEG00000019693	cpsf6	53	85.113	Fundulus_heteroclitus
ENSACIG00000018413	cpsf6	57	96.689	ENSGMOG00000012951	cpsf6	59	96.689	Gadus_morhua
ENSACIG00000018413	cpsf6	60	52.247	ENSGALG00000040962	CPSF7	63	56.977	Gallus_gallus
ENSACIG00000018413	cpsf6	100	94.774	ENSHBUG00000005998	cpsf6	100	94.774	Haplochromis_burtoni
ENSACIG00000018413	cpsf6	88	39.265	ENSHGLG00000019090	-	73	58.140	Heterocephalus_glaber_female
ENSACIG00000018413	cpsf6	65	55.208	ENSHGLG00100013933	-	73	58.140	Heterocephalus_glaber_male
ENSACIG00000018413	cpsf6	95	39.894	ENSSTOG00000007708	CPSF7	71	58.140	Ictidomys_tridecemlineatus
ENSACIG00000018413	cpsf6	95	38.977	ENSJJAG00000019390	Cpsf7	73	56.250	Jaculus_jaculus
ENSACIG00000018413	cpsf6	72	45.570	ENSLACG00000005542	CPSF7	70	45.570	Latimeria_chalumnae
ENSACIG00000018413	cpsf6	64	88.623	ENSLOCG00000016190	cpsf6	66	89.759	Lepisosteus_oculatus
ENSACIG00000018413	cpsf6	95	40.071	ENSLAFG00000032084	CPSF7	71	58.721	Loxodonta_africana
ENSACIG00000018413	cpsf6	95	40.248	ENSMFAG00000001401	CPSF7	71	55.114	Macaca_fascicularis
ENSACIG00000018413	cpsf6	95	40.248	ENSMMUG00000015280	CPSF7	73	55.114	Macaca_mulatta
ENSACIG00000018413	cpsf6	95	38.801	ENSMNEG00000029585	CPSF7	73	55.114	Macaca_nemestrina
ENSACIG00000018413	cpsf6	95	40.248	ENSMLEG00000031269	CPSF7	69	55.114	Mandrillus_leucophaeus
ENSACIG00000018413	cpsf6	100	92.334	ENSMAMG00000010385	cpsf6	100	92.334	Mastacembelus_armatus
ENSACIG00000018413	cpsf6	100	94.774	ENSMZEG00005007975	cpsf6	100	94.774	Maylandia_zebra
ENSACIG00000018413	cpsf6	95	42.707	ENSMGAG00000004876	CPSF7	62	59.036	Meleagris_gallopavo
ENSACIG00000018413	cpsf6	95	39.894	ENSMAUG00000013020	Cpsf7	71	58.140	Mesocricetus_auratus
ENSACIG00000018413	cpsf6	95	39.894	ENSMICG00000013788	CPSF7	71	55.682	Microcebus_murinus
ENSACIG00000018413	cpsf6	95	39.894	ENSMOCG00000000072	Cpsf7	71	58.140	Microtus_ochrogaster
ENSACIG00000018413	cpsf6	62	52.041	ENSMODG00000020364	CPSF7	72	56.818	Monodelphis_domestica
ENSACIG00000018413	cpsf6	78	96.903	ENSMALG00000014908	cpsf6	89	96.903	Monopterus_albus
ENSACIG00000018413	cpsf6	95	39.894	MGP_CAROLIEiJ_G0022690	Cpsf7	71	58.140	Mus_caroli
ENSACIG00000018413	cpsf6	95	39.894	ENSMUSG00000034820	Cpsf7	71	58.140	Mus_musculus
ENSACIG00000018413	cpsf6	70	82.028	MGP_PahariEiJ_G0031253	Cpsf6	56	75.938	Mus_pahari
ENSACIG00000018413	cpsf6	95	39.894	MGP_PahariEiJ_G0014184	Cpsf7	71	58.140	Mus_pahari
ENSACIG00000018413	cpsf6	95	39.894	MGP_SPRETEiJ_G0023604	Cpsf7	71	58.140	Mus_spretus
ENSACIG00000018413	cpsf6	94	38.420	ENSMPUG00000014163	CPSF7	68	54.545	Mustela_putorius_furo
ENSACIG00000018413	cpsf6	64	89.855	ENSMLUG00000028728	-	93	79.394	Myotis_lucifugus
ENSACIG00000018413	cpsf6	70	77.717	ENSMLUG00000023960	-	79	73.626	Myotis_lucifugus
ENSACIG00000018413	cpsf6	95	38.977	ENSMLUG00000013278	CPSF7	73	55.682	Myotis_lucifugus
ENSACIG00000018413	cpsf6	95	39.894	ENSNGAG00000005031	Cpsf7	71	58.140	Nannospalax_galili
ENSACIG00000018413	cpsf6	100	95.122	ENSNBRG00000004089	cpsf6	100	95.122	Neolamprologus_brichardi
ENSACIG00000018413	cpsf6	95	39.716	ENSNLEG00000002529	CPSF7	65	55.114	Nomascus_leucogenys
ENSACIG00000018413	cpsf6	62	54.688	ENSMEUG00000002261	CPSF7	71	55.682	Notamacropus_eugenii
ENSACIG00000018413	cpsf6	68	87.629	ENSODEG00000004418	-	86	89.888	Octodon_degus
ENSACIG00000018413	cpsf6	95	39.506	ENSODEG00000002610	CPSF7	71	57.714	Octodon_degus
ENSACIG00000018413	cpsf6	100	94.087	ENSONIG00000011702	cpsf6	100	94.087	Oreochromis_niloticus
ENSACIG00000018413	cpsf6	95	41.476	ENSOCUG00000024726	CPSF7	71	57.558	Oryctolagus_cuniculus
ENSACIG00000018413	cpsf6	63	36.486	ENSORLG00000006495	CPSF7	72	40.341	Oryzias_latipes
ENSACIG00000018413	cpsf6	63	36.486	ENSORLG00020012657	CPSF7	72	40.341	Oryzias_latipes_hni
ENSACIG00000018413	cpsf6	63	36.486	ENSORLG00015011091	CPSF7	72	40.341	Oryzias_latipes_hsok
ENSACIG00000018413	cpsf6	65	37.229	ENSOMEG00000000539	CPSF7	72	40.462	Oryzias_melastigma
ENSACIG00000018413	cpsf6	95	40.426	ENSOGAG00000027958	CPSF7	66	55.682	Otolemur_garnettii
ENSACIG00000018413	cpsf6	62	54.688	ENSOARG00000012937	CPSF7	64	57.558	Ovis_aries
ENSACIG00000018413	cpsf6	95	39.716	ENSPPAG00000028232	CPSF7	69	55.114	Pan_paniscus
ENSACIG00000018413	cpsf6	62	54.688	ENSPPRG00000008538	CPSF7	71	55.682	Panthera_pardus
ENSACIG00000018413	cpsf6	95	39.894	ENSPTIG00000021699	CPSF7	71	55.682	Panthera_tigris_altaica
ENSACIG00000018413	cpsf6	95	39.716	ENSPTRG00000003742	CPSF7	71	55.114	Pan_troglodytes
ENSACIG00000018413	cpsf6	95	40.248	ENSPANG00000006037	CPSF7	67	55.114	Papio_anubis
ENSACIG00000018413	cpsf6	55	62.286	ENSPANG00000011641	CPSF6	95	79.070	Papio_anubis
ENSACIG00000018413	cpsf6	62	46.893	ENSPKIG00000018054	CPSF7	65	46.875	Paramormyrops_kingsleyae
ENSACIG00000018413	cpsf6	95	39.894	ENSPEMG00000012648	Cpsf7	73	58.140	Peromyscus_maniculatus_bairdii
ENSACIG00000018413	cpsf6	62	52.041	ENSPCIG00000002551	CPSF7	84	53.631	Phascolarctos_cinereus
ENSACIG00000018413	cpsf6	77	92.121	ENSPFOG00000006990	cpsf6	74	95.161	Poecilia_formosa
ENSACIG00000018413	cpsf6	95	87.109	ENSPMEG00000001353	cpsf6	94	86.924	Poecilia_mexicana
ENSACIG00000018413	cpsf6	95	39.716	ENSPPYG00000003188	CPSF7	71	55.114	Pongo_abelii
ENSACIG00000018413	cpsf6	95	39.894	ENSPCOG00000011976	CPSF7	71	55.682	Propithecus_coquereli
ENSACIG00000018413	cpsf6	95	39.716	ENSPVAG00000010675	CPSF7	71	55.682	Pteropus_vampyrus
ENSACIG00000018413	cpsf6	95	38.977	ENSRNOG00000020668	Cpsf7	73	58.140	Rattus_norvegicus
ENSACIG00000018413	cpsf6	95	40.248	ENSRBIG00000031429	CPSF7	81	60.544	Rhinopithecus_bieti
ENSACIG00000018413	cpsf6	95	40.248	ENSRROG00000045009	CPSF7	71	55.114	Rhinopithecus_roxellana
ENSACIG00000018413	cpsf6	95	39.716	ENSSBOG00000018431	CPSF7	71	55.114	Saimiri_boliviensis_boliviensis
ENSACIG00000018413	cpsf6	60	54.688	ENSSHAG00000011964	CPSF7	68	55.682	Sarcophilus_harrisii
ENSACIG00000018413	cpsf6	59	43.575	ENSSFOG00015010288	cpsf7	69	45.139	Scleropages_formosus
ENSACIG00000018413	cpsf6	100	93.206	ENSSDUG00000005024	cpsf6	100	93.206	Seriola_dumerili
ENSACIG00000018413	cpsf6	100	93.206	ENSSLDG00000009042	cpsf6	100	93.206	Seriola_lalandi_dorsalis
ENSACIG00000018413	cpsf6	82	85.433	ENSSARG00000006743	CPSF6	80	84.190	Sorex_araneus
ENSACIG00000018413	cpsf6	62	53.846	ENSSPUG00000019344	CPSF7	73	58.140	Sphenodon_punctatus
ENSACIG00000018413	cpsf6	100	93.019	ENSSPAG00000013906	cpsf6	100	93.019	Stegastes_partitus
ENSACIG00000018413	cpsf6	95	39.894	ENSSSCG00000013083	CPSF7	75	64.885	Sus_scrofa
ENSACIG00000018413	cpsf6	60	50.282	ENSTGUG00000006513	CPSF7	71	55.556	Taeniopygia_guttata
ENSACIG00000018413	cpsf6	95	88.376	ENSTNIG00000007576	cpsf6	94	88.561	Tetraodon_nigroviridis
ENSACIG00000018413	cpsf6	60	54.167	ENSTTRG00000011085	CPSF7	69	55.682	Tursiops_truncatus
ENSACIG00000018413	cpsf6	95	39.894	ENSUAMG00000017809	CPSF7	71	55.682	Ursus_americanus
ENSACIG00000018413	cpsf6	95	39.192	ENSUMAG00000011825	CPSF7	73	55.682	Ursus_maritimus
ENSACIG00000018413	cpsf6	60	91.525	ENSUMAG00000020779	CPSF6	94	77.712	Ursus_maritimus
ENSACIG00000018413	cpsf6	95	39.894	ENSVVUG00000004939	CPSF7	79	61.224	Vulpes_vulpes
ENSACIG00000018413	cpsf6	62	53.846	ENSXETG00000006715	cpsf7	65	52.695	Xenopus_tropicalis