EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000018502 (Gene tree)
Gene ID: -
Gene Symbol: srsf2a
Alias: -
Full Name: serine/arginine-rich splicing factor 2a
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 1082 bases
Position: chrCCOE01000280.1:111362-112443
Accession: ZDB-GENE-040426-2706
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000023818	RRM_1	PF00076.22	4.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000024444	-	519	-	ENSACIP00000023818	172 (aa)	-	-

Gene Model

Click here to download ENSACIG00000018502's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000018502's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000018502	srsf2a	56	37.500	ENSACIG00000021744	pabpn1	51	37.363
ENSACIG00000018502	srsf2a	58	96.000	ENSACIG00000009605	srsf2b	64	80.597
ENSACIG00000018502	srsf2a	55	35.106	ENSACIG00000016419	-	56	35.106
ENSACIG00000018502	srsf2a	51	34.483	ENSACIG00000012502	-	74	34.483

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000018502	srsf2a	74	85.039	ENSG00000161547	SRSF2	82	95.327	Homo_sapiens
ENSACIG00000018502	srsf2a	58	96.000	ENSATEG00000018159	srsf2b	66	81.022	Anabas_testudineus
ENSACIG00000018502	srsf2a	51	62.069	ENSBTAG00000050905	-	51	62.069	Bos_taurus
ENSACIG00000018502	srsf2a	95	44.910	WBGene00004701	rsp-4	79	59.000	Caenorhabditis_elegans
ENSACIG00000018502	srsf2a	52	96.667	ENSCLAG00000012450	-	99	66.316	Chinchilla_lanigera
ENSACIG00000018502	srsf2a	100	64.532	ENSCHOG00000014019	-	52	92.523	Choloepus_hoffmanni
ENSACIG00000018502	srsf2a	53	81.522	ENSCING00000004198	-	57	79.787	Ciona_intestinalis
ENSACIG00000018502	srsf2a	53	82.609	ENSCSAVG00000009199	-	53	80.851	Ciona_savignyi
ENSACIG00000018502	srsf2a	68	95.763	ENSDARG00000057484	srsf2a	100	95.763	Danio_rerio
ENSACIG00000018502	srsf2a	92	50.610	ENSDNOG00000033905	-	53	63.000	Dasypus_novemcinctus
ENSACIG00000018502	srsf2a	54	96.774	ENSDORG00000014460	Srsf2	99	64.039	Dipodomys_ordii
ENSACIG00000018502	srsf2a	55	78.947	ENSEBUG00000008729	-	52	74.528	Eptatretus_burgeri
ENSACIG00000018502	srsf2a	58	97.000	ENSGMOG00000001599	srsf2a	67	84.091	Gadus_morhua
ENSACIG00000018502	srsf2a	62	99.065	ENSGAFG00000005791	srsf2a	99	74.129	Gambusia_affinis
ENSACIG00000018502	srsf2a	84	70.988	ENSGACG00000003105	srsf2a	78	72.903	Gasterosteus_aculeatus
ENSACIG00000018502	srsf2a	58	95.000	ENSGGOG00000014378	SRSF2	86	70.455	Gorilla_gorilla
ENSACIG00000018502	srsf2a	74	86.614	ENSHCOG00000015538	srsf2a	99	68.293	Hippocampus_comes
ENSACIG00000018502	srsf2a	50	95.349	ENSHCOG00000008598	-	73	92.553	Hippocampus_comes
ENSACIG00000018502	srsf2a	54	96.774	ENSSTOG00000025265	-	52	96.809	Ictidomys_tridecemlineatus
ENSACIG00000018502	srsf2a	65	98.198	ENSLBEG00000027265	srsf2a	100	71.889	Labrus_bergylta
ENSACIG00000018502	srsf2a	100	68.056	ENSLOCG00000011252	srsf2a	50	94.393	Lepisosteus_oculatus
ENSACIG00000018502	srsf2a	74	85.039	ENSMMUG00000022413	SRSF2	51	95.327	Macaca_mulatta
ENSACIG00000018502	srsf2a	52	95.506	ENSMLEG00000025525	SRSF2	99	65.957	Mandrillus_leucophaeus
ENSACIG00000018502	srsf2a	58	96.000	ENSMMOG00000020132	srsf2b	52	93.578	Mola_mola
ENSACIG00000018502	srsf2a	78	88.889	ENSMMOG00000020751	srsf2a	100	72.430	Mola_mola
ENSACIG00000018502	srsf2a	56	96.907	ENSMALG00000014936	srsf2b	50	92.661	Monopterus_albus
ENSACIG00000018502	srsf2a	84	73.034	ENSMALG00000012956	srsf2a	80	68.108	Monopterus_albus
ENSACIG00000018502	srsf2a	58	95.000	ENSMPUG00000013408	-	67	74.000	Mustela_putorius_furo
ENSACIG00000018502	srsf2a	84	52.778	ENSMLUG00000026613	-	52	59.813	Myotis_lucifugus
ENSACIG00000018502	srsf2a	58	96.000	ENSNBRG00000021086	srsf2b	63	80.741	Neolamprologus_brichardi
ENSACIG00000018502	srsf2a	58	95.000	ENSNLEG00000002547	SRSF2	50	95.327	Nomascus_leucogenys
ENSACIG00000018502	srsf2a	58	95.000	ENSOANG00000002695	-	89	95.327	Ornithorhynchus_anatinus
ENSACIG00000018502	srsf2a	56	93.814	ENSORLG00020014420	srsf2b	67	75.177	Oryzias_latipes_hni
ENSACIG00000018502	srsf2a	56	93.814	ENSORLG00015007643	srsf2b	50	90.385	Oryzias_latipes_hsok
ENSACIG00000018502	srsf2a	56	92.784	ENSOMEG00000016488	srsf2b	66	75.887	Oryzias_melastigma
ENSACIG00000018502	srsf2a	56	63.918	ENSOGAG00000031672	-	71	45.161	Otolemur_garnettii
ENSACIG00000018502	srsf2a	60	95.192	ENSPMGG00000010911	srsf2a	100	69.712	Periophthalmus_magnuspinnatus
ENSACIG00000018502	srsf2a	58	96.000	ENSPMGG00000006860	-	60	96.000	Periophthalmus_magnuspinnatus
ENSACIG00000018502	srsf2a	90	72.903	ENSPFOG00000020356	srsf2a	77	73.224	Poecilia_formosa
ENSACIG00000018502	srsf2a	90	72.903	ENSPLAG00000001856	srsf2a	78	73.224	Poecilia_latipinna
ENSACIG00000018502	srsf2a	90	72.903	ENSPMEG00000008714	srsf2a	77	73.224	Poecilia_mexicana
ENSACIG00000018502	srsf2a	58	95.000	ENSPVAG00000014264	-	89	95.327	Pteropus_vampyrus
ENSACIG00000018502	srsf2a	56	96.875	ENSSBOG00000030904	SRSF2	99	66.667	Saimiri_boliviensis_boliviensis
ENSACIG00000018502	srsf2a	76	75.159	ENSSMAG00000005854	srsf2a	99	69.626	Scophthalmus_maximus
ENSACIG00000018502	srsf2a	74	79.528	ENSSDUG00000014762	srsf2b	51	93.519	Seriola_dumerili
ENSACIG00000018502	srsf2a	74	72.185	ENSSPUG00000007582	-	50	95.283	Sphenodon_punctatus
ENSACIG00000018502	srsf2a	91	60.759	ENSSSCG00000012212	-	55	72.222	Sus_scrofa
ENSACIG00000018502	srsf2a	74	82.308	ENSTRUG00000024363	srsf2b	67	72.185	Takifugu_rubripes
ENSACIG00000018502	srsf2a	91	85.350	ENSTNIG00000001280	srsf2a	72	79.755	Tetraodon_nigroviridis
ENSACIG00000018502	srsf2a	77	89.474	ENSXETG00000025271	srsf2	61	87.407	Xenopus_tropicalis
ENSACIG00000018502	srsf2a	90	72.903	ENSXMAG00000015676	srsf2a	78	73.224	Xiphophorus_maculatus