EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000018697 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 4501 bases
Position: chrCCOE01000840.1:2247308-2251808
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000024069	RRM_1	PF00076.22	2.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000024705	-	207	-	ENSACIP00000024069	68 (aa)	-	-

Gene Model

Click here to download ENSACIG00000018697's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000018697's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000018697	-	87	94.915	ENSACIG00000001537	-	84	94.915

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000018697	-	85	86.207	ENSG00000154548	SRSF12	73	53.333	Homo_sapiens
ENSACIG00000018697	-	94	98.438	ENSAPOG00000024545	-	100	98.438	Acanthochromis_polyacanthus
ENSACIG00000018697	-	94	85.938	ENSAPEG00000016160	-	91	85.938	Amphiprion_percula
ENSACIG00000018697	-	100	82.353	ENSATEG00000003493	-	94	82.353	Anabas_testudineus
ENSACIG00000018697	-	90	91.803	ENSAMXG00000031867	-	88	91.803	Astyanax_mexicanus
ENSACIG00000018697	-	90	86.885	ENSCHIG00000023999	-	88	86.885	Capra_hircus
ENSACIG00000018697	-	85	74.138	ENSCHIG00000011877	-	76	74.138	Capra_hircus
ENSACIG00000018697	-	88	88.333	ENSDARG00000112572	CR293507.1	100	88.333	Danio_rerio
ENSACIG00000018697	-	81	92.727	ENSFHEG00000000365	-	50	92.727	Fundulus_heteroclitus
ENSACIG00000018697	-	93	92.063	ENSHCOG00000005897	-	93	92.063	Hippocampus_comes
ENSACIG00000018697	-	87	91.525	ENSHCOG00000008417	-	68	91.525	Hippocampus_comes
ENSACIG00000018697	-	88	91.667	ENSIPUG00000023118	-	57	91.667	Ictalurus_punctatus
ENSACIG00000018697	-	88	91.667	ENSLBEG00000012669	-	91	91.667	Labrus_bergylta
ENSACIG00000018697	-	94	87.500	ENSMAMG00000007646	-	71	87.500	Mastacembelus_armatus
ENSACIG00000018697	-	99	82.090	ENSMAMG00000008111	-	100	82.090	Mastacembelus_armatus
ENSACIG00000018697	-	85	86.207	ENSMAUG00000009812	-	85	86.207	Mesocricetus_auratus
ENSACIG00000018697	-	100	85.294	ENSMMOG00000013350	-	97	85.294	Mola_mola
ENSACIG00000018697	-	100	94.118	ENSNBRG00000010616	-	97	94.118	Neolamprologus_brichardi
ENSACIG00000018697	-	81	83.636	ENSODEG00000000894	-	81	83.636	Octodon_degus
ENSACIG00000018697	-	84	84.211	ENSODEG00000003118	-	80	84.211	Octodon_degus
ENSACIG00000018697	-	99	85.075	ENSPKIG00000000613	-	75	85.075	Paramormyrops_kingsleyae
ENSACIG00000018697	-	97	74.242	ENSPEMG00000021564	-	86	74.242	Peromyscus_maniculatus_bairdii
ENSACIG00000018697	-	90	90.164	ENSPNAG00000009501	-	92	90.164	Pygocentrus_nattereri
ENSACIG00000018697	-	96	76.056	ENSSMAG00000018546	-	95	76.056	Scophthalmus_maximus
ENSACIG00000018697	-	91	95.161	ENSSLDG00000002710	-	100	95.161	Seriola_lalandi_dorsalis
ENSACIG00000018697	-	82	92.857	ENSSLDG00000000417	-	74	92.857	Seriola_lalandi_dorsalis
ENSACIG00000018697	-	90	84.127	ENSSPUG00000016216	-	94	84.127	Sphenodon_punctatus
ENSACIG00000018697	-	100	83.824	ENSSPAG00000001821	-	97	83.824	Stegastes_partitus
ENSACIG00000018697	-	90	91.803	ENSTRUG00000019904	-	84	91.803	Takifugu_rubripes