EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000018732 (Gene tree)
Gene ID: -
Gene Symbol: zic1
Alias: odd-paired-like|opl|wu:fj51c06|zgc:136736
Full Name: zic family member 1 (odd-paired homolog%2C Drosophila)
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 5511 bases
Position: chrCCOE01000449.1:1188510-1194020
Accession: ZDB-GENE-000208-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000024122	zf-C2H2	PF00096.26	2.8e-21	1	3
ENSACIP00000024122	zf-C2H2	PF00096.26	2.8e-21	2	3
ENSACIP00000024122	zf-C2H2	PF00096.26	2.8e-21	3	3
ENSACIP00000024122	zf-met	PF12874.7	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000024759	-	1023	-	ENSACIP00000024122	340 (aa)	-	-

Gene Model

Click here to download ENSACIG00000018732's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000018732's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000018732	zic1	52	42.593	ENSACIG00000017050	-	93	46.753
ENSACIG00000018732	zic1	51	39.161	ENSACIG00000003754	-	97	39.161
ENSACIG00000018732	zic1	55	34.545	ENSACIG00000015411	-	70	34.545
ENSACIG00000018732	zic1	55	46.250	ENSACIG00000019815	-	82	46.250
ENSACIG00000018732	zic1	51	40.187	ENSACIG00000023313	-	88	40.187
ENSACIG00000018732	zic1	56	47.115	ENSACIG00000023212	-	80	47.115
ENSACIG00000018732	zic1	51	47.273	ENSACIG00000004745	-	89	47.273
ENSACIG00000018732	zic1	50	38.947	ENSACIG00000013149	-	82	38.947
ENSACIG00000018732	zic1	51	42.718	ENSACIG00000014282	znf526	51	35.119
ENSACIG00000018732	zic1	54	33.333	ENSACIG00000001369	-	84	33.333
ENSACIG00000018732	zic1	63	36.471	ENSACIG00000003515	-	88	40.000
ENSACIG00000018732	zic1	57	46.364	ENSACIG00000010647	-	96	44.565
ENSACIG00000018732	zic1	56	37.589	ENSACIG00000010739	-	67	37.589
ENSACIG00000018732	zic1	51	47.706	ENSACIG00000019791	-	86	47.748
ENSACIG00000018732	zic1	55	43.860	ENSACIG00000015429	-	75	43.860
ENSACIG00000018732	zic1	53	43.636	ENSACIG00000004666	-	96	42.453

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000018732	zic1	93	86.280	ENSG00000152977	ZIC1	89	80.165	Homo_sapiens
ENSACIG00000018732	zic1	93	58.445	ENSEBUG00000002180	zic1	80	59.733	Eptatretus_burgeri
ENSACIG00000018732	zic1	93	58.445	ENSEBUG00000006709	zic1	80	59.733	Eptatretus_burgeri
ENSACIG00000018732	zic1	77	87.500	ENSFDAG00000013872	ZIC1	100	87.500	Fukomys_damarensis
ENSACIG00000018732	zic1	93	98.101	ENSKMAG00000011689	zic1	94	98.101	Kryptolebias_marmoratus
ENSACIG00000018732	zic1	68	75.949	ENSOANG00000007365	-	72	76.471	Ornithorhynchus_anatinus
ENSACIG00000018732	zic1	91	96.795	ENSORLG00020012199	zic1	87	96.795	Oryzias_latipes_hni
ENSACIG00000018732	zic1	58	89.286	ENSSHAG00000015025	ZIC1	65	87.079	Sarcophilus_harrisii