EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000018956 (Gene tree)
Gene ID: -
Gene Symbol: exosc1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 4240 bases
Position: chrCCOE01000328.1:274997-279236
Accession: ZDB-GENE-080926-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000024410	EXOSC1	PF10447.9	3.8e-15	1	1
ENSACIP00000024410	ECR1_N	PF14382.6	3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000025053	-	615	-	ENSACIP00000024410	204 (aa)	-	-

Gene Model

Click here to download ENSACIG00000018956's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000018956's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000018956	exosc1	92	79.787	ENSG00000171311	EXOSC1	96	79.787	Homo_sapiens
ENSACIG00000018956	exosc1	91	97.838	ENSAPOG00000007822	exosc1	95	97.838	Acanthochromis_polyacanthus
ENSACIG00000018956	exosc1	92	80.319	ENSAMEG00000000129	EXOSC1	96	80.319	Ailuropoda_melanoleuca
ENSACIG00000018956	exosc1	91	97.838	ENSAOCG00000010699	exosc1	95	97.838	Amphiprion_ocellaris
ENSACIG00000018956	exosc1	88	86.111	ENSAPEG00000012690	exosc1	97	86.111	Amphiprion_percula
ENSACIG00000018956	exosc1	91	97.838	ENSATEG00000018683	exosc1	95	97.838	Anabas_testudineus
ENSACIG00000018956	exosc1	91	77.838	ENSACAG00000002101	EXOSC1	95	77.838	Anolis_carolinensis
ENSACIG00000018956	exosc1	92	79.787	ENSANAG00000034669	EXOSC1	96	79.787	Aotus_nancymaae
ENSACIG00000018956	exosc1	91	99.459	ENSACLG00000021243	exosc1	95	99.459	Astatotilapia_calliptera
ENSACIG00000018956	exosc1	91	93.514	ENSAMXG00000011116	exosc1	95	93.514	Astyanax_mexicanus
ENSACIG00000018956	exosc1	92	80.319	ENSBTAG00000012699	EXOSC1	96	80.319	Bos_taurus
ENSACIG00000018956	exosc1	81	35.632	WBGene00012966	exos-1	84	35.632	Caenorhabditis_elegans
ENSACIG00000018956	exosc1	92	79.255	ENSCJAG00000016586	EXOSC1	96	79.255	Callithrix_jacchus
ENSACIG00000018956	exosc1	92	79.787	ENSCAFG00000009068	EXOSC1	91	79.787	Canis_familiaris
ENSACIG00000018956	exosc1	92	79.787	ENSCAFG00020006002	EXOSC1	91	79.787	Canis_lupus_dingo
ENSACIG00000018956	exosc1	92	80.319	ENSCHIG00000015253	EXOSC1	96	80.319	Capra_hircus
ENSACIG00000018956	exosc1	92	78.723	ENSTSYG00000000760	EXOSC1	96	78.723	Carlito_syrichta
ENSACIG00000018956	exosc1	92	79.787	ENSCPOG00000001173	EXOSC1	96	79.787	Cavia_porcellus
ENSACIG00000018956	exosc1	92	42.105	ENSCCAG00000023986	EXOSC1	96	42.105	Cebus_capucinus
ENSACIG00000018956	exosc1	92	79.787	ENSCATG00000034114	EXOSC1	96	79.787	Cercocebus_atys
ENSACIG00000018956	exosc1	92	79.787	ENSCLAG00000002463	EXOSC1	96	79.787	Chinchilla_lanigera
ENSACIG00000018956	exosc1	92	79.255	ENSCSAG00000005870	EXOSC1	96	79.255	Chlorocebus_sabaeus
ENSACIG00000018956	exosc1	89	66.298	ENSCHOG00000006477	EXOSC1	97	66.298	Choloepus_hoffmanni
ENSACIG00000018956	exosc1	52	67.925	ENSCPBG00000011949	EXOSC1	88	67.925	Chrysemys_picta_bellii
ENSACIG00000018956	exosc1	90	52.174	ENSCING00000022734	-	88	52.174	Ciona_intestinalis
ENSACIG00000018956	exosc1	90	55.978	ENSCSAVG00000010865	-	94	55.978	Ciona_savignyi
ENSACIG00000018956	exosc1	92	79.787	ENSCANG00000034159	EXOSC1	96	79.787	Colobus_angolensis_palliatus
ENSACIG00000018956	exosc1	92	78.723	ENSCGRG00001000335	Exosc1	96	78.723	Cricetulus_griseus_chok1gshd
ENSACIG00000018956	exosc1	92	78.723	ENSCGRG00000011602	Exosc1	96	78.723	Cricetulus_griseus_crigri
ENSACIG00000018956	exosc1	91	81.081	ENSCSEG00000007895	exosc1	91	81.081	Cynoglossus_semilaevis
ENSACIG00000018956	exosc1	91	88.108	ENSCVAG00000016748	exosc1	95	88.108	Cyprinodon_variegatus
ENSACIG00000018956	exosc1	91	93.514	ENSDARG00000059841	exosc1	95	93.514	Danio_rerio
ENSACIG00000018956	exosc1	68	77.536	ENSDNOG00000007983	EXOSC1	93	77.536	Dasypus_novemcinctus
ENSACIG00000018956	exosc1	92	79.255	ENSDORG00000016528	Exosc1	96	79.255	Dipodomys_ordii
ENSACIG00000018956	exosc1	89	47.312	FBgn0032346	Csl4	90	47.312	Drosophila_melanogaster
ENSACIG00000018956	exosc1	92	77.660	ENSETEG00000002469	-	96	77.660	Echinops_telfairi
ENSACIG00000018956	exosc1	90	64.706	ENSEBUG00000008164	exosc1	94	64.706	Eptatretus_burgeri
ENSACIG00000018956	exosc1	92	70.213	ENSEASG00005008684	EXOSC1	96	70.213	Equus_asinus_asinus
ENSACIG00000018956	exosc1	55	54.867	ENSECAG00000010621	EXOSC1	68	54.867	Equus_caballus
ENSACIG00000018956	exosc1	92	78.723	ENSEEUG00000005647	EXOSC1	96	78.723	Erinaceus_europaeus
ENSACIG00000018956	exosc1	91	94.595	ENSELUG00000017369	exosc1	82	94.595	Esox_lucius
ENSACIG00000018956	exosc1	92	80.319	ENSFCAG00000040563	EXOSC1	91	80.319	Felis_catus
ENSACIG00000018956	exosc1	92	77.128	ENSFALG00000008450	EXOSC1	96	77.128	Ficedula_albicollis
ENSACIG00000018956	exosc1	92	79.787	ENSFDAG00000000846	EXOSC1	96	79.787	Fukomys_damarensis
ENSACIG00000018956	exosc1	91	88.649	ENSFHEG00000009154	exosc1	95	88.649	Fundulus_heteroclitus
ENSACIG00000018956	exosc1	91	94.595	ENSGMOG00000008993	exosc1	95	94.595	Gadus_morhua
ENSACIG00000018956	exosc1	92	64.894	ENSGALG00000039917	EXOSC1	99	83.448	Gallus_gallus
ENSACIG00000018956	exosc1	100	81.863	ENSGAFG00000010265	exosc1	94	81.863	Gambusia_affinis
ENSACIG00000018956	exosc1	91	92.973	ENSGACG00000018936	exosc1	95	92.973	Gasterosteus_aculeatus
ENSACIG00000018956	exosc1	90	77.174	ENSGAGG00000019192	EXOSC1	94	77.174	Gopherus_agassizii
ENSACIG00000018956	exosc1	92	68.617	ENSGGOG00000003099	EXOSC1	96	68.617	Gorilla_gorilla
ENSACIG00000018956	exosc1	93	98.421	ENSHBUG00000017857	exosc1	99	98.421	Haplochromis_burtoni
ENSACIG00000018956	exosc1	92	79.255	ENSHGLG00000016927	EXOSC1	96	79.255	Heterocephalus_glaber_female
ENSACIG00000018956	exosc1	92	79.255	ENSHGLG00100012208	EXOSC1	96	79.255	Heterocephalus_glaber_male
ENSACIG00000018956	exosc1	91	95.135	ENSHCOG00000019882	exosc1	95	95.135	Hippocampus_comes
ENSACIG00000018956	exosc1	91	90.811	ENSIPUG00000007685	exosc1	95	90.811	Ictalurus_punctatus
ENSACIG00000018956	exosc1	92	79.255	ENSSTOG00000006615	EXOSC1	96	79.255	Ictidomys_tridecemlineatus
ENSACIG00000018956	exosc1	54	66.364	ENSSTOG00000029860	-	83	66.364	Ictidomys_tridecemlineatus
ENSACIG00000018956	exosc1	92	79.787	ENSJJAG00000013311	Exosc1	96	79.787	Jaculus_jaculus
ENSACIG00000018956	exosc1	91	92.973	ENSKMAG00000001202	exosc1	78	92.973	Kryptolebias_marmoratus
ENSACIG00000018956	exosc1	91	97.297	ENSLBEG00000011448	exosc1	95	97.297	Labrus_bergylta
ENSACIG00000018956	exosc1	91	64.921	ENSLOCG00000003776	exosc1	94	64.921	Lepisosteus_oculatus
ENSACIG00000018956	exosc1	92	79.255	ENSLAFG00000015983	EXOSC1	96	79.255	Loxodonta_africana
ENSACIG00000018956	exosc1	92	79.787	ENSMFAG00000001493	EXOSC1	96	79.787	Macaca_fascicularis
ENSACIG00000018956	exosc1	92	79.787	ENSMMUG00000020028	EXOSC1	96	72.917	Macaca_mulatta
ENSACIG00000018956	exosc1	92	79.787	ENSMNEG00000029816	EXOSC1	96	79.787	Macaca_nemestrina
ENSACIG00000018956	exosc1	92	73.936	ENSMLEG00000027643	EXOSC1	96	73.936	Mandrillus_leucophaeus
ENSACIG00000018956	exosc1	91	96.757	ENSMAMG00000012200	exosc1	95	96.757	Mastacembelus_armatus
ENSACIG00000018956	exosc1	91	99.459	ENSMZEG00005007042	exosc1	95	99.459	Maylandia_zebra
ENSACIG00000018956	exosc1	92	68.617	ENSMAUG00000020462	-	96	68.617	Mesocricetus_auratus
ENSACIG00000018956	exosc1	92	79.787	ENSMICG00000007664	EXOSC1	89	79.787	Microcebus_murinus
ENSACIG00000018956	exosc1	94	72.917	ENSMOCG00000017124	-	98	72.917	Microtus_ochrogaster
ENSACIG00000018956	exosc1	92	78.723	ENSMOCG00000006004	-	96	78.723	Microtus_ochrogaster
ENSACIG00000018956	exosc1	90	74.863	ENSMMOG00000021403	exosc1	95	74.863	Mola_mola
ENSACIG00000018956	exosc1	93	78.534	ENSMODG00000004213	EXOSC1	97	78.534	Monodelphis_domestica
ENSACIG00000018956	exosc1	91	96.216	ENSMALG00000007061	exosc1	93	96.216	Monopterus_albus
ENSACIG00000018956	exosc1	92	78.191	MGP_CAROLIEiJ_G0022959	Exosc1	96	78.191	Mus_caroli
ENSACIG00000018956	exosc1	92	78.191	ENSMUSG00000034321	Exosc1	96	78.191	Mus_musculus
ENSACIG00000018956	exosc1	92	78.723	MGP_PahariEiJ_G0014449	Exosc1	96	78.723	Mus_pahari
ENSACIG00000018956	exosc1	92	78.191	MGP_SPRETEiJ_G0023880	Exosc1	96	78.191	Mus_spretus
ENSACIG00000018956	exosc1	92	80.319	ENSMPUG00000017044	EXOSC1	96	80.319	Mustela_putorius_furo
ENSACIG00000018956	exosc1	92	79.787	ENSMLUG00000009228	EXOSC1	96	79.787	Myotis_lucifugus
ENSACIG00000018956	exosc1	92	77.128	ENSNGAG00000022033	Exosc1	96	77.128	Nannospalax_galili
ENSACIG00000018956	exosc1	91	77.297	ENSNBRG00000024007	exosc1	94	77.297	Neolamprologus_brichardi
ENSACIG00000018956	exosc1	92	79.255	ENSNLEG00000013872	EXOSC1	96	79.255	Nomascus_leucogenys
ENSACIG00000018956	exosc1	54	69.369	ENSMEUG00000002246	EXOSC1	97	69.369	Notamacropus_eugenii
ENSACIG00000018956	exosc1	92	78.723	ENSOPRG00000005065	EXOSC1	96	78.723	Ochotona_princeps
ENSACIG00000018956	exosc1	92	79.787	ENSODEG00000016709	EXOSC1	96	79.787	Octodon_degus
ENSACIG00000018956	exosc1	91	98.378	ENSONIG00000017683	exosc1	95	98.378	Oreochromis_niloticus
ENSACIG00000018956	exosc1	56	90.351	ENSOANG00000006563	EXOSC1	98	86.992	Ornithorhynchus_anatinus
ENSACIG00000018956	exosc1	92	78.307	ENSOCUG00000011898	-	96	78.307	Oryctolagus_cuniculus
ENSACIG00000018956	exosc1	92	73.936	ENSOCUG00000026461	-	96	73.936	Oryctolagus_cuniculus
ENSACIG00000018956	exosc1	91	90.860	ENSORLG00000011595	exosc1	95	90.860	Oryzias_latipes
ENSACIG00000018956	exosc1	91	90.860	ENSORLG00020005831	exosc1	95	90.860	Oryzias_latipes_hni
ENSACIG00000018956	exosc1	91	90.323	ENSORLG00015004317	exosc1	95	90.323	Oryzias_latipes_hsok
ENSACIG00000018956	exosc1	91	76.757	ENSOMEG00000013907	exosc1	94	76.757	Oryzias_melastigma
ENSACIG00000018956	exosc1	92	79.255	ENSOGAG00000016259	EXOSC1	96	79.255	Otolemur_garnettii
ENSACIG00000018956	exosc1	92	79.787	ENSOARG00000010136	EXOSC1	96	79.787	Ovis_aries
ENSACIG00000018956	exosc1	92	73.684	ENSPPAG00000039842	EXOSC1	96	73.684	Pan_paniscus
ENSACIG00000018956	exosc1	92	80.319	ENSPPRG00000023366	EXOSC1	96	80.319	Panthera_pardus
ENSACIG00000018956	exosc1	92	80.319	ENSPTIG00000017701	EXOSC1	96	80.319	Panthera_tigris_altaica
ENSACIG00000018956	exosc1	92	79.787	ENSPTRG00000002808	EXOSC1	96	79.787	Pan_troglodytes
ENSACIG00000018956	exosc1	92	79.787	ENSPANG00000021324	EXOSC1	96	79.787	Papio_anubis
ENSACIG00000018956	exosc1	91	91.351	ENSPKIG00000016037	exosc1	95	91.351	Paramormyrops_kingsleyae
ENSACIG00000018956	exosc1	87	65.789	ENSPSIG00000013571	EXOSC1	98	79.339	Pelodiscus_sinensis
ENSACIG00000018956	exosc1	91	82.703	ENSPMGG00000014002	exosc1	95	82.703	Periophthalmus_magnuspinnatus
ENSACIG00000018956	exosc1	92	78.723	ENSPEMG00000010710	-	96	78.723	Peromyscus_maniculatus_bairdii
ENSACIG00000018956	exosc1	91	70.053	ENSPMAG00000000195	exosc1	95	70.053	Petromyzon_marinus
ENSACIG00000018956	exosc1	93	77.368	ENSPCIG00000002210	EXOSC1	96	77.368	Phascolarctos_cinereus
ENSACIG00000018956	exosc1	100	81.863	ENSPFOG00000006755	exosc1	100	81.863	Poecilia_formosa
ENSACIG00000018956	exosc1	91	88.108	ENSPLAG00000005880	exosc1	95	88.108	Poecilia_latipinna
ENSACIG00000018956	exosc1	100	81.863	ENSPMEG00000015598	exosc1	100	81.863	Poecilia_mexicana
ENSACIG00000018956	exosc1	91	75.676	ENSPREG00000000405	exosc1	89	75.676	Poecilia_reticulata
ENSACIG00000018956	exosc1	92	79.787	ENSPPYG00000002531	EXOSC1	96	79.787	Pongo_abelii
ENSACIG00000018956	exosc1	92	78.723	ENSPCAG00000009135	EXOSC1	96	78.723	Procavia_capensis
ENSACIG00000018956	exosc1	92	73.404	ENSPCOG00000027539	EXOSC1	96	73.404	Propithecus_coquereli
ENSACIG00000018956	exosc1	92	79.787	ENSPVAG00000003372	EXOSC1	96	79.787	Pteropus_vampyrus
ENSACIG00000018956	exosc1	91	99.459	ENSPNYG00000021745	exosc1	95	99.459	Pundamilia_nyererei
ENSACIG00000018956	exosc1	91	92.432	ENSPNAG00000001944	exosc1	95	92.432	Pygocentrus_nattereri
ENSACIG00000018956	exosc1	92	78.723	ENSRNOG00000048708	Exosc1	96	78.723	Rattus_norvegicus
ENSACIG00000018956	exosc1	92	79.787	ENSRBIG00000035618	EXOSC1	96	79.787	Rhinopithecus_bieti
ENSACIG00000018956	exosc1	92	79.787	ENSRROG00000032589	EXOSC1	89	79.787	Rhinopithecus_roxellana
ENSACIG00000018956	exosc1	61	38.750	YNL232W	CSL4	54	38.750	Saccharomyces_cerevisiae
ENSACIG00000018956	exosc1	92	79.787	ENSSBOG00000000359	EXOSC1	96	79.787	Saimiri_boliviensis_boliviensis
ENSACIG00000018956	exosc1	71	88.356	ENSSHAG00000018219	EXOSC1	99	88.356	Sarcophilus_harrisii
ENSACIG00000018956	exosc1	95	88.083	ENSSFOG00015016289	-	99	88.083	Scleropages_formosus
ENSACIG00000018956	exosc1	95	87.629	ENSSFOG00015009069	exosc1	95	90.811	Scleropages_formosus
ENSACIG00000018956	exosc1	91	97.297	ENSSMAG00000003721	exosc1	95	97.297	Scophthalmus_maximus
ENSACIG00000018956	exosc1	91	96.757	ENSSDUG00000002993	exosc1	95	96.757	Seriola_dumerili
ENSACIG00000018956	exosc1	91	96.757	ENSSLDG00000025181	exosc1	95	96.757	Seriola_lalandi_dorsalis
ENSACIG00000018956	exosc1	92	68.085	ENSSARG00000000162	EXOSC1	96	68.085	Sorex_araneus
ENSACIG00000018956	exosc1	92	72.872	ENSSPUG00000012263	EXOSC1	96	72.872	Sphenodon_punctatus
ENSACIG00000018956	exosc1	99	80.676	ENSSPAG00000016792	exosc1	89	80.676	Stegastes_partitus
ENSACIG00000018956	exosc1	92	79.255	ENSSSCG00000010518	EXOSC1	88	79.255	Sus_scrofa
ENSACIG00000018956	exosc1	91	77.838	ENSTGUG00000009692	EXOSC1	95	77.838	Taeniopygia_guttata
ENSACIG00000018956	exosc1	91	84.865	ENSTRUG00000007706	exosc1	96	84.865	Takifugu_rubripes
ENSACIG00000018956	exosc1	91	84.574	ENSTNIG00000014079	exosc1	95	84.574	Tetraodon_nigroviridis
ENSACIG00000018956	exosc1	92	73.404	ENSTBEG00000006011	EXOSC1	96	73.404	Tupaia_belangeri
ENSACIG00000018956	exosc1	90	81.421	ENSTTRG00000009887	EXOSC1	99	81.421	Tursiops_truncatus
ENSACIG00000018956	exosc1	92	63.298	ENSUAMG00000010266	EXOSC1	96	63.298	Ursus_americanus
ENSACIG00000018956	exosc1	92	63.298	ENSUMAG00000022002	EXOSC1	96	63.298	Ursus_maritimus
ENSACIG00000018956	exosc1	92	79.787	ENSVVUG00000023192	EXOSC1	61	79.787	Vulpes_vulpes
ENSACIG00000018956	exosc1	90	77.174	ENSXETG00000003434	exosc1	95	77.174	Xenopus_tropicalis
ENSACIG00000018956	exosc1	59	89.256	ENSXCOG00000014499	exosc1	93	89.256	Xiphophorus_couchianus
ENSACIG00000018956	exosc1	91	76.216	ENSXMAG00000023382	exosc1	89	76.216	Xiphophorus_maculatus