EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000019121 (Gene tree)
Gene ID: -
Gene Symbol: rrp1
Alias: Nop52|cb43|nnp1|sb:cb43|wu:fb37f12|wu:fi05d01
Full Name: ribosomal RNA processing 1
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 11813 bases
Position: chrCCOE01000066.1:736452-748264
Accession: ZDB-GENE-030131-9837
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000024638	Nop52	PF05997.12	2.8e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000025284	-	1416	-	ENSACIP00000024638	471 (aa)	-	-

Gene Model

Click here to download ENSACIG00000019121's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000019121's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000019121	rrp1	57	49.117	ENSG00000160214	RRP1	61	49.117	Homo_sapiens
ENSACIG00000019121	rrp1	57	51.761	ENSAMEG00000011448	RRP1	62	51.761	Ailuropoda_melanoleuca
ENSACIG00000019121	rrp1	83	51.117	ENSAOCG00000017894	-	88	52.239	Amphiprion_ocellaris
ENSACIG00000019121	rrp1	57	49.470	ENSANAG00000037815	RRP1	64	50.350	Aotus_nancymaae
ENSACIG00000019121	rrp1	64	46.057	ENSBTAG00000003981	RRP1	68	48.944	Bos_taurus
ENSACIG00000019121	rrp1	63	47.516	ENSCJAG00000043205	RRP1	58	50.709	Callithrix_jacchus
ENSACIG00000019121	rrp1	57	51.064	ENSCAFG00000010646	RRP1	62	51.418	Canis_familiaris
ENSACIG00000019121	rrp1	57	51.064	ENSCAFG00020018979	RRP1	62	51.418	Canis_lupus_dingo
ENSACIG00000019121	rrp1	64	44.410	ENSCHIG00000020948	RRP1	66	48.148	Capra_hircus
ENSACIG00000019121	rrp1	57	51.601	ENSTSYG00000012831	RRP1	62	51.601	Carlito_syrichta
ENSACIG00000019121	rrp1	56	47.557	ENSCAPG00000008576	RRP1	76	48.052	Cavia_aperea
ENSACIG00000019121	rrp1	57	51.930	ENSCPOG00000038986	RRP1	62	51.773	Cavia_porcellus
ENSACIG00000019121	rrp1	63	47.239	ENSCCAG00000029828	RRP1	61	50.350	Cebus_capucinus
ENSACIG00000019121	rrp1	57	50.549	ENSCATG00000015632	RRP1	61	50.000	Cercocebus_atys
ENSACIG00000019121	rrp1	57	52.669	ENSCLAG00000011639	RRP1	62	52.669	Chinchilla_lanigera
ENSACIG00000019121	rrp1	57	50.000	ENSCSAG00000007936	RRP1	86	50.000	Chlorocebus_sabaeus
ENSACIG00000019121	rrp1	57	34.409	ENSCING00000003304	-	60	34.409	Ciona_intestinalis
ENSACIG00000019121	rrp1	59	48.822	ENSCANG00000042611	RRP1	69	48.822	Colobus_angolensis_palliatus
ENSACIG00000019121	rrp1	57	49.648	ENSCGRG00001011920	Rrp1	64	49.296	Cricetulus_griseus_chok1gshd
ENSACIG00000019121	rrp1	57	49.648	ENSCGRG00000008915	Rrp1	64	49.296	Cricetulus_griseus_crigri
ENSACIG00000019121	rrp1	62	55.799	ENSCSEG00000020711	-	55	59.247	Cynoglossus_semilaevis
ENSACIG00000019121	rrp1	62	57.325	ENSCVAG00000017568	-	72	62.143	Cyprinodon_variegatus
ENSACIG00000019121	rrp1	74	43.478	ENSDNOG00000019880	RRP1	66	48.639	Dasypus_novemcinctus
ENSACIG00000019121	rrp1	79	37.745	ENSDORG00000002104	Rrp1	70	47.059	Dipodomys_ordii
ENSACIG00000019121	rrp1	57	39.560	ENSETEG00000002963	-	62	40.071	Echinops_telfairi
ENSACIG00000019121	rrp1	77	38.363	ENSEASG00005001673	RRP1	64	48.763	Equus_asinus_asinus
ENSACIG00000019121	rrp1	77	37.852	ENSECAG00000015703	RRP1	65	49.129	Equus_caballus
ENSACIG00000019121	rrp1	80	45.688	ENSELUG00000015885	-	76	56.228	Esox_lucius
ENSACIG00000019121	rrp1	72	45.042	ENSFCAG00000008434	RRP1	62	51.636	Felis_catus
ENSACIG00000019121	rrp1	80	41.753	ENSFDAG00000013728	RRP1	62	52.015	Fukomys_damarensis
ENSACIG00000019121	rrp1	57	50.177	ENSGGOG00000000173	RRP1	62	49.462	Gorilla_gorilla
ENSACIG00000019121	rrp1	94	73.720	ENSHBUG00000003766	-	63	73.469	Haplochromis_burtoni
ENSACIG00000019121	rrp1	72	47.564	ENSHGLG00000017085	RRP1	59	53.846	Heterocephalus_glaber_female
ENSACIG00000019121	rrp1	57	54.027	ENSIPUG00000000673	-	57	55.034	Ictalurus_punctatus
ENSACIG00000019121	rrp1	77	43.617	ENSSTOG00000011116	RRP1	63	52.747	Ictidomys_tridecemlineatus
ENSACIG00000019121	rrp1	80	42.172	ENSJJAG00000018886	Rrp1	63	50.735	Jaculus_jaculus
ENSACIG00000019121	rrp1	94	45.809	ENSKMAG00000005539	rrp1	71	48.560	Kryptolebias_marmoratus
ENSACIG00000019121	rrp1	59	60.586	ENSLBEG00000021417	RRP1	77	61.238	Labrus_bergylta
ENSACIG00000019121	rrp1	62	43.034	ENSLAFG00000000766	RRP1B	68	43.945	Loxodonta_africana
ENSACIG00000019121	rrp1	59	53.110	ENSLAFG00000022901	RRP1	65	45.424	Loxodonta_africana
ENSACIG00000019121	rrp1	57	50.704	ENSMFAG00000003202	RRP1	61	50.704	Macaca_fascicularis
ENSACIG00000019121	rrp1	57	50.000	ENSMMUG00000012304	RRP1	61	50.000	Macaca_mulatta
ENSACIG00000019121	rrp1	57	49.645	ENSMNEG00000031210	RRP1	61	49.645	Macaca_nemestrina
ENSACIG00000019121	rrp1	57	50.000	ENSMLEG00000037797	RRP1	67	50.000	Mandrillus_leucophaeus
ENSACIG00000019121	rrp1	57	38.028	ENSMAUG00000017653	Rrp1	60	42.254	Mesocricetus_auratus
ENSACIG00000019121	rrp1	57	50.526	ENSMICG00000004700	RRP1	65	50.526	Microcebus_murinus
ENSACIG00000019121	rrp1	62	55.660	ENSMMOG00000019175	rrp1	71	60.638	Mola_mola
ENSACIG00000019121	rrp1	62	59.621	ENSMALG00000010310	rrp1	76	63.699	Monopterus_albus
ENSACIG00000019121	rrp1	81	38.326	MGP_CAROLIEiJ_G0015508	Rrp1	69	42.647	Mus_caroli
ENSACIG00000019121	rrp1	81	37.665	ENSMUSG00000061032	Rrp1	69	42.353	Mus_musculus
ENSACIG00000019121	rrp1	75	56.542	MGP_PahariEiJ_G0030921	Rrp1	81	41.750	Mus_pahari
ENSACIG00000019121	rrp1	59	55.869	ENSMPUG00000009826	RRP1	51	57.895	Mustela_putorius_furo
ENSACIG00000019121	rrp1	66	57.377	ENSMLUG00000017788	RRP1	67	43.582	Myotis_lucifugus
ENSACIG00000019121	rrp1	84	75.424	ENSNBRG00000021980	-	94	80.087	Neolamprologus_brichardi
ENSACIG00000019121	rrp1	57	49.823	ENSNLEG00000034734	RRP1	61	49.823	Nomascus_leucogenys
ENSACIG00000019121	rrp1	63	42.525	ENSOPRG00000001319	RRP1	77	44.928	Ochotona_princeps
ENSACIG00000019121	rrp1	59	77.032	ENSONIG00000004264	rrp1	55	76.761	Oreochromis_niloticus
ENSACIG00000019121	rrp1	59	48.780	ENSOANG00000006472	-	89	42.296	Ornithorhynchus_anatinus
ENSACIG00000019121	rrp1	86	37.819	ENSOGAG00000006105	RRP1	64	49.827	Otolemur_garnettii
ENSACIG00000019121	rrp1	60	46.000	ENSOARG00000011434	RRP1	68	47.667	Ovis_aries
ENSACIG00000019121	rrp1	57	49.470	ENSPPAG00000029050	RRP1	62	48.746	Pan_paniscus
ENSACIG00000019121	rrp1	73	45.556	ENSPPRG00000010656	RRP1	63	52.727	Panthera_pardus
ENSACIG00000019121	rrp1	73	38.420	ENSPTIG00000019473	RRP1	64	44.643	Panthera_tigris_altaica
ENSACIG00000019121	rrp1	57	49.823	ENSPTRG00000013962	RRP1	62	49.104	Pan_troglodytes
ENSACIG00000019121	rrp1	57	49.645	ENSPANG00000015097	RRP1	61	50.355	Papio_anubis
ENSACIG00000019121	rrp1	57	48.936	ENSPMGG00000007512	-	69	48.936	Periophthalmus_magnuspinnatus
ENSACIG00000019121	rrp1	57	48.582	ENSPEMG00000018421	Rrp1	67	47.000	Peromyscus_maniculatus_bairdii
ENSACIG00000019121	rrp1	62	46.645	ENSPCIG00000015523	-	65	47.492	Phascolarctos_cinereus
ENSACIG00000019121	rrp1	57	48.763	ENSPPYG00000011474	RRP1	61	48.763	Pongo_abelii
ENSACIG00000019121	rrp1	57	48.443	ENSPCOG00000017706	RRP1	64	47.735	Propithecus_coquereli
ENSACIG00000019121	rrp1	57	48.780	ENSRNOG00000001203	Rrp1	65	50.173	Rattus_norvegicus
ENSACIG00000019121	rrp1	57	49.470	ENSRBIG00000032082	RRP1	61	49.477	Rhinopithecus_bieti
ENSACIG00000019121	rrp1	57	49.470	ENSRROG00000039799	RRP1	61	49.477	Rhinopithecus_roxellana
ENSACIG00000019121	rrp1	63	49.840	ENSSBOG00000034689	RRP1	61	53.480	Saimiri_boliviensis_boliviensis
ENSACIG00000019121	rrp1	63	45.652	ENSSHAG00000010304	-	91	47.973	Sarcophilus_harrisii
ENSACIG00000019121	rrp1	69	58.430	ENSSMAG00000016847	-	73	64.726	Scophthalmus_maximus
ENSACIG00000019121	rrp1	57	49.466	ENSSSCG00000037061	RRP1	63	49.466	Sus_scrofa
ENSACIG00000019121	rrp1	57	62.414	ENSTRUG00000017592	rrp1	81	62.414	Takifugu_rubripes
ENSACIG00000019121	rrp1	69	39.385	ENSUMAG00000025510	RRP1B	56	42.662	Ursus_maritimus
ENSACIG00000019121	rrp1	65	48.903	ENSUMAG00000025507	RRP1	70	50.842	Ursus_maritimus