EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000019349 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 2490 bases
Position: chrCCOE01000361.1:4107-6596
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000024970	RVT_1	PF00078.27	9.8e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000025621	-	726	-	ENSACIP00000024970	241 (aa)	-	-

Gene Model

Click here to download ENSACIG00000019349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000019349's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000019349	-	67	35.404	ENSACIG00000010457	-	64	32.298
ENSACIG00000019349	-	61	36.242	ENSACIG00000011711	-	64	36.184
ENSACIG00000019349	-	88	36.449	ENSACIG00000019567	-	83	35.981
ENSACIG00000019349	-	71	38.286	ENSACIG00000006752	-	81	36.571
ENSACIG00000019349	-	76	38.462	ENSACIG00000008842	-	83	37.912

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000019349	-	68	46.061	ENSAPEG00000008260	-	82	41.379	Amphiprion_percula
ENSACIG00000019349	-	69	54.819	ENSAPEG00000001164	-	61	53.012	Amphiprion_percula
ENSACIG00000019349	-	65	52.866	ENSATEG00000024731	-	64	52.866	Anabas_testudineus
ENSACIG00000019349	-	67	45.963	ENSACAG00000028706	-	59	44.720	Anolis_carolinensis
ENSACIG00000019349	-	87	45.714	ENSACLG00000003644	-	60	44.762	Astatotilapia_calliptera
ENSACIG00000019349	-	77	45.699	ENSDARG00000116065	CR848040.3	57	45.699	Danio_rerio
ENSACIG00000019349	-	75	48.333	ENSELUG00000019648	-	57	46.111	Esox_lucius
ENSACIG00000019349	-	68	53.939	ENSFHEG00000017568	-	51	53.939	Fundulus_heteroclitus
ENSACIG00000019349	-	75	50.000	ENSHBUG00000014670	-	52	48.913	Haplochromis_burtoni
ENSACIG00000019349	-	74	49.721	ENSIPUG00000007789	-	59	49.721	Ictalurus_punctatus
ENSACIG00000019349	-	68	42.945	ENSIPUG00000003714	-	65	42.945	Ictalurus_punctatus
ENSACIG00000019349	-	68	49.091	ENSIPUG00000017577	-	78	49.091	Ictalurus_punctatus
ENSACIG00000019349	-	68	47.879	ENSIPUG00000017481	-	79	47.879	Ictalurus_punctatus
ENSACIG00000019349	-	71	45.029	ENSIPUG00000001254	-	67	46.316	Ictalurus_punctatus
ENSACIG00000019349	-	68	49.091	ENSIPUG00000018566	-	74	49.091	Ictalurus_punctatus
ENSACIG00000019349	-	61	50.685	ENSIPUG00000001282	-	55	51.515	Ictalurus_punctatus
ENSACIG00000019349	-	77	49.462	ENSKMAG00000007346	-	67	47.312	Kryptolebias_marmoratus
ENSACIG00000019349	-	68	50.303	ENSLBEG00000028866	-	51	49.704	Labrus_bergylta
ENSACIG00000019349	-	72	47.977	ENSLBEG00000013551	-	58	47.977	Labrus_bergylta
ENSACIG00000019349	-	51	53.968	ENSLBEG00000020214	-	72	52.419	Labrus_bergylta
ENSACIG00000019349	-	68	51.515	ENSLBEG00000009763	-	53	51.515	Labrus_bergylta
ENSACIG00000019349	-	54	38.168	ENSLACG00000022213	-	65	37.313	Latimeria_chalumnae
ENSACIG00000019349	-	61	44.218	ENSLACG00000022344	-	61	45.062	Latimeria_chalumnae
ENSACIG00000019349	-	61	45.578	ENSLACG00000022619	-	54	45.679	Latimeria_chalumnae
ENSACIG00000019349	-	61	44.218	ENSLACG00000022505	-	53	45.062	Latimeria_chalumnae
ENSACIG00000019349	-	73	41.477	ENSLACG00000007146	-	52	42.593	Latimeria_chalumnae
ENSACIG00000019349	-	61	44.218	ENSLACG00000022149	-	50	45.062	Latimeria_chalumnae
ENSACIG00000019349	-	67	45.062	ENSLACG00000022147	-	58	45.062	Latimeria_chalumnae
ENSACIG00000019349	-	68	40.237	ENSLACG00000022236	-	59	41.304	Latimeria_chalumnae
ENSACIG00000019349	-	74	50.562	ENSMAMG00000002714	-	57	50.000	Mastacembelus_armatus
ENSACIG00000019349	-	58	49.640	ENSMAMG00000016074	-	53	48.201	Mastacembelus_armatus
ENSACIG00000019349	-	74	51.124	ENSMAMG00000011020	-	56	50.562	Mastacembelus_armatus
ENSACIG00000019349	-	59	47.973	ENSMAMG00000014970	-	51	47.297	Mastacembelus_armatus
ENSACIG00000019349	-	87	47.143	ENSMZEG00005022672	-	50	52.907	Maylandia_zebra
ENSACIG00000019349	-	63	39.869	ENSMMOG00000010846	-	85	38.562	Mola_mola
ENSACIG00000019349	-	74	44.751	ENSORLG00000028122	-	50	44.199	Oryzias_latipes
ENSACIG00000019349	-	74	47.514	ENSORLG00000026882	-	60	46.961	Oryzias_latipes
ENSACIG00000019349	-	77	45.946	ENSORLG00000030291	-	52	46.111	Oryzias_latipes
ENSACIG00000019349	-	68	49.697	ENSORLG00000027051	-	50	49.091	Oryzias_latipes
ENSACIG00000019349	-	75	49.444	ENSORLG00000025528	-	56	46.667	Oryzias_latipes
ENSACIG00000019349	-	74	46.961	ENSORLG00000024021	-	65	46.409	Oryzias_latipes
ENSACIG00000019349	-	74	48.619	ENSORLG00020008245	-	53	48.066	Oryzias_latipes_hni
ENSACIG00000019349	-	74	48.066	ENSORLG00020007610	-	53	47.514	Oryzias_latipes_hni
ENSACIG00000019349	-	68	50.303	ENSORLG00020016174	-	51	49.697	Oryzias_latipes_hni
ENSACIG00000019349	-	93	42.105	ENSORLG00020021067	-	55	41.667	Oryzias_latipes_hni
ENSACIG00000019349	-	70	40.351	ENSORLG00020002943	-	82	36.683	Oryzias_latipes_hni
ENSACIG00000019349	-	74	48.066	ENSORLG00015016856	-	51	47.514	Oryzias_latipes_hsok
ENSACIG00000019349	-	74	47.514	ENSORLG00015002366	-	54	46.961	Oryzias_latipes_hsok
ENSACIG00000019349	-	74	48.619	ENSORLG00015019038	-	51	48.066	Oryzias_latipes_hsok
ENSACIG00000019349	-	77	56.216	ENSORLG00015016432	-	51	55.676	Oryzias_latipes_hsok
ENSACIG00000019349	-	74	48.066	ENSORLG00015001218	-	51	47.514	Oryzias_latipes_hsok
ENSACIG00000019349	-	74	48.066	ENSORLG00015022051	-	64	47.514	Oryzias_latipes_hsok
ENSACIG00000019349	-	77	61.081	ENSORLG00015015384	-	51	60.541	Oryzias_latipes_hsok
ENSACIG00000019349	-	67	46.296	ENSOMEG00000016252	-	60	46.667	Oryzias_melastigma
ENSACIG00000019349	-	77	58.602	ENSPKIG00000017113	-	58	57.838	Paramormyrops_kingsleyae
ENSACIG00000019349	-	75	65.000	ENSPKIG00000014328	-	57	64.444	Paramormyrops_kingsleyae
ENSACIG00000019349	-	74	48.045	ENSPKIG00000004473	-	59	46.927	Paramormyrops_kingsleyae
ENSACIG00000019349	-	71	52.353	ENSPFOG00000024325	-	61	51.807	Poecilia_formosa
ENSACIG00000019349	-	61	47.297	ENSPNAG00000003097	-	52	48.795	Pygocentrus_nattereri
ENSACIG00000019349	-	75	43.814	ENSPNAG00000013359	-	50	43.077	Pygocentrus_nattereri
ENSACIG00000019349	-	69	51.205	ENSSPAG00000005749	-	50	50.000	Stegastes_partitus
ENSACIG00000019349	-	77	46.774	ENSTRUG00000020404	-	70	46.774	Takifugu_rubripes