EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000019392 (Gene tree)
Gene ID: -
Gene Symbol: thoc1
Alias: p84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 10848 bases
Position: chrCCOE01000148.1:1681465-1692312
Accession: ZDB-GENE-030826-9
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000025152	efThoc1	PF11957.8	2.6e-142	1	1
ENSACIP00000025121	efThoc1	PF11957.8	1.1e-131	1	2
ENSACIP00000025121	efThoc1	PF11957.8	1.1e-131	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000025811	-	1905	-	ENSACIP00000025152	634 (aa)	-	-
ENSACIT00000025779	-	1878	-	ENSACIP00000025121	625 (aa)	-	-

Gene Model

Click here to download ENSACIG00000019392's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000019392's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000019392	thoc1	99	68.875	ENSG00000079134	THOC1	99	77.574	Homo_sapiens
ENSACIG00000019392	thoc1	99	69.183	ENSAMEG00000006645	THOC1	97	69.953	Ailuropoda_melanoleuca
ENSACIG00000019392	thoc1	95	88.399	ENSAOCG00000008391	thoc1	94	88.399	Amphiprion_ocellaris
ENSACIG00000019392	thoc1	95	92.997	ENSAPEG00000001093	thoc1	98	89.342	Amphiprion_percula
ENSACIG00000019392	thoc1	95	90.879	ENSATEG00000004783	thoc1	98	87.304	Anabas_testudineus
ENSACIG00000019392	thoc1	99	68.558	ENSAPLG00000016149	THOC1	96	69.219	Anas_platyrhynchos
ENSACIG00000019392	thoc1	94	74.062	ENSACAG00000008307	THOC1	94	69.921	Anolis_carolinensis
ENSACIG00000019392	thoc1	99	68.293	ENSANAG00000033200	THOC1	97	69.040	Aotus_nancymaae
ENSACIG00000019392	thoc1	95	93.322	ENSACLG00000016836	thoc1	98	90.125	Astatotilapia_calliptera
ENSACIG00000019392	thoc1	95	79.805	ENSAMXG00000014708	thoc1	97	79.119	Astyanax_mexicanus
ENSACIG00000019392	thoc1	99	69.337	ENSBTAG00000019215	THOC1	97	70.110	Bos_taurus
ENSACIG00000019392	thoc1	67	37.557	WBGene00020172	thoc-1	65	37.277	Caenorhabditis_elegans
ENSACIG00000019392	thoc1	99	69.029	ENSCJAG00000020450	THOC1	93	73.529	Callithrix_jacchus
ENSACIG00000019392	thoc1	99	69.029	ENSCAFG00000018324	THOC1	97	69.797	Canis_familiaris
ENSACIG00000019392	thoc1	99	69.029	ENSCAFG00020017894	THOC1	97	69.797	Canis_lupus_dingo
ENSACIG00000019392	thoc1	99	69.337	ENSCHIG00000015399	THOC1	95	74.020	Capra_hircus
ENSACIG00000019392	thoc1	99	68.875	ENSTSYG00000010585	THOC1	96	69.640	Carlito_syrichta
ENSACIG00000019392	thoc1	94	51.974	ENSCAPG00000016270	THOC1	97	48.518	Cavia_aperea
ENSACIG00000019392	thoc1	99	68.413	ENSCPOG00000000959	THOC1	93	72.876	Cavia_porcellus
ENSACIG00000019392	thoc1	99	69.029	ENSCCAG00000025766	THOC1	97	69.797	Cebus_capucinus
ENSACIG00000019392	thoc1	99	66.564	ENSCATG00000028180	THOC1	96	71.594	Cercocebus_atys
ENSACIG00000019392	thoc1	94	73.366	ENSCLAG00000009117	THOC1	99	70.032	Chinchilla_lanigera
ENSACIG00000019392	thoc1	99	69.029	ENSCSAG00000017631	THOC1	97	69.797	Chlorocebus_sabaeus
ENSACIG00000019392	thoc1	80	78.112	ENSCHOG00000010609	THOC1	76	78.112	Choloepus_hoffmanni
ENSACIG00000019392	thoc1	94	74.183	ENSCPBG00000027558	THOC1	93	74.020	Chrysemys_picta_bellii
ENSACIG00000019392	thoc1	70	47.447	ENSCING00000007663	-	96	46.555	Ciona_intestinalis
ENSACIG00000019392	thoc1	94	47.764	ENSCSAVG00000010649	-	100	46.645	Ciona_savignyi
ENSACIG00000019392	thoc1	99	68.875	ENSCANG00000034265	THOC1	90	78.571	Colobus_angolensis_palliatus
ENSACIG00000019392	thoc1	94	73.409	ENSCGRG00001016464	Thoc1	97	69.327	Cricetulus_griseus_chok1gshd
ENSACIG00000019392	thoc1	94	73.409	ENSCGRG00000010269	-	99	69.716	Cricetulus_griseus_crigri
ENSACIG00000019392	thoc1	90	60.702	ENSCGRG00000003390	-	96	60.702	Cricetulus_griseus_crigri
ENSACIG00000019392	thoc1	95	87.055	ENSCSEG00000012486	thoc1	99	85.965	Cynoglossus_semilaevis
ENSACIG00000019392	thoc1	99	85.692	ENSCVAG00000020600	thoc1	98	85.692	Cyprinodon_variegatus
ENSACIG00000019392	thoc1	95	83.388	ENSDARG00000088246	thoc1	94	83.388	Danio_rerio
ENSACIG00000019392	thoc1	99	68.827	ENSDNOG00000019217	THOC1	97	69.592	Dasypus_novemcinctus
ENSACIG00000019392	thoc1	98	66.720	ENSDORG00000008060	Thoc1	98	66.934	Dipodomys_ordii
ENSACIG00000019392	thoc1	96	35.139	FBgn0037382	Hpr1	73	40.481	Drosophila_melanogaster
ENSACIG00000019392	thoc1	89	51.966	ENSETEG00000004165	THOC1	96	52.456	Echinops_telfairi
ENSACIG00000019392	thoc1	93	62.687	ENSEBUG00000005998	thoc1	98	63.455	Eptatretus_burgeri
ENSACIG00000019392	thoc1	98	69.327	ENSEASG00005002549	THOC1	93	68.701	Equus_asinus_asinus
ENSACIG00000019392	thoc1	98	69.797	ENSECAG00000009267	THOC1	87	69.797	Equus_caballus
ENSACIG00000019392	thoc1	70	77.419	ENSEEUG00000012214	-	68	77.419	Erinaceus_europaeus
ENSACIG00000019392	thoc1	95	85.552	ENSELUG00000023277	thoc1	94	85.552	Esox_lucius
ENSACIG00000019392	thoc1	99	69.183	ENSFCAG00000022454	THOC1	80	74.020	Felis_catus
ENSACIG00000019392	thoc1	94	72.771	ENSFALG00000006205	THOC1	99	69.171	Ficedula_albicollis
ENSACIG00000019392	thoc1	99	69.315	ENSFDAG00000006842	THOC1	98	69.640	Fukomys_damarensis
ENSACIG00000019392	thoc1	95	90.717	ENSFHEG00000008841	thoc1	98	87.147	Fundulus_heteroclitus
ENSACIG00000019392	thoc1	94	88.072	ENSGMOG00000011486	thoc1	97	84.748	Gadus_morhua
ENSACIG00000019392	thoc1	99	68.259	ENSGALG00000014915	THOC1	93	71.981	Gallus_gallus
ENSACIG00000019392	thoc1	95	88.274	ENSGAFG00000021464	thoc1	98	84.483	Gambusia_affinis
ENSACIG00000019392	thoc1	95	90.228	ENSGACG00000017361	thoc1	94	90.228	Gasterosteus_aculeatus
ENSACIG00000019392	thoc1	97	72.857	ENSGAGG00000021230	-	91	74.346	Gopherus_agassizii
ENSACIG00000019392	thoc1	99	69.029	ENSGGOG00000003013	THOC1	96	69.797	Gorilla_gorilla
ENSACIG00000019392	thoc1	95	93.648	ENSHBUG00000009096	thoc1	98	90.439	Haplochromis_burtoni
ENSACIG00000019392	thoc1	98	69.797	ENSHGLG00000003712	-	97	69.797	Heterocephalus_glaber_female
ENSACIG00000019392	thoc1	69	69.643	ENSHGLG00000009264	-	98	71.892	Heterocephalus_glaber_female
ENSACIG00000019392	thoc1	98	69.953	ENSHGLG00100003570	THOC1	97	69.953	Heterocephalus_glaber_male
ENSACIG00000019392	thoc1	68	68.984	ENSHGLG00100002225	-	98	72.571	Heterocephalus_glaber_male
ENSACIG00000019392	thoc1	96	74.465	ENSIPUG00000005306	thoc1	96	73.476	Ictalurus_punctatus
ENSACIG00000019392	thoc1	99	68.721	ENSSTOG00000006484	THOC1	93	73.203	Ictidomys_tridecemlineatus
ENSACIG00000019392	thoc1	51	67.930	ENSJJAG00000014893	-	90	74.383	Jaculus_jaculus
ENSACIG00000019392	thoc1	95	89.739	ENSKMAG00000003904	thoc1	94	89.739	Kryptolebias_marmoratus
ENSACIG00000019392	thoc1	95	90.228	ENSLBEG00000020372	thoc1	96	86.520	Labrus_bergylta
ENSACIG00000019392	thoc1	94	73.693	ENSLACG00000014869	THOC1	93	73.366	Latimeria_chalumnae
ENSACIG00000019392	thoc1	95	82.496	ENSLOCG00000002097	thoc1	94	82.172	Lepisosteus_oculatus
ENSACIG00000019392	thoc1	99	69.183	ENSLAFG00000009585	THOC1	97	69.953	Loxodonta_africana
ENSACIG00000019392	thoc1	99	69.029	ENSMFAG00000041520	THOC1	96	69.797	Macaca_fascicularis
ENSACIG00000019392	thoc1	99	69.029	ENSMMUG00000004662	THOC1	97	69.797	Macaca_mulatta
ENSACIG00000019392	thoc1	99	69.029	ENSMNEG00000040177	THOC1	96	69.797	Macaca_nemestrina
ENSACIG00000019392	thoc1	99	69.029	ENSMLEG00000034201	THOC1	96	69.797	Mandrillus_leucophaeus
ENSACIG00000019392	thoc1	95	89.560	ENSMAMG00000016747	thoc1	98	89.560	Mastacembelus_armatus
ENSACIG00000019392	thoc1	95	93.322	ENSMZEG00005024609	thoc1	98	90.125	Maylandia_zebra
ENSACIG00000019392	thoc1	94	72.403	ENSMGAG00000009811	THOC1	99	68.917	Meleagris_gallopavo
ENSACIG00000019392	thoc1	94	72.920	ENSMAUG00000010272	Thoc1	97	68.858	Mesocricetus_auratus
ENSACIG00000019392	thoc1	99	69.337	ENSMICG00000027200	THOC1	97	70.110	Microcebus_murinus
ENSACIG00000019392	thoc1	98	62.240	ENSMOCG00000014924	-	93	61.600	Microtus_ochrogaster
ENSACIG00000019392	thoc1	94	72.104	ENSMOCG00000014536	-	80	72.104	Microtus_ochrogaster
ENSACIG00000019392	thoc1	93	92.941	ENSMMOG00000011772	thoc1	100	92.941	Mola_mola
ENSACIG00000019392	thoc1	99	68.092	ENSMODG00000021482	THOC1	97	68.837	Monodelphis_domestica
ENSACIG00000019392	thoc1	95	91.857	ENSMALG00000021872	thoc1	100	86.998	Monopterus_albus
ENSACIG00000019392	thoc1	98	68.701	MGP_CAROLIEiJ_G0021989	Thoc1	97	68.701	Mus_caroli
ENSACIG00000019392	thoc1	98	68.858	ENSMUSG00000024287	Thoc1	97	68.858	Mus_musculus
ENSACIG00000019392	thoc1	98	68.858	MGP_PahariEiJ_G0018726	Thoc1	97	68.858	Mus_pahari
ENSACIG00000019392	thoc1	98	68.858	MGP_SPRETEiJ_G0022905	Thoc1	97	68.858	Mus_spretus
ENSACIG00000019392	thoc1	99	69.183	ENSMPUG00000005448	THOC1	97	69.953	Mustela_putorius_furo
ENSACIG00000019392	thoc1	99	67.951	ENSMLUG00000004090	-	93	72.712	Myotis_lucifugus
ENSACIG00000019392	thoc1	54	67.978	ENSMLUG00000024912	-	96	61.979	Myotis_lucifugus
ENSACIG00000019392	thoc1	85	67.450	ENSMLUG00000027965	-	96	64.522	Myotis_lucifugus
ENSACIG00000019392	thoc1	99	68.567	ENSNGAG00000001401	-	93	73.409	Nannospalax_galili
ENSACIG00000019392	thoc1	99	54.729	ENSNGAG00000008061	-	97	55.205	Nannospalax_galili
ENSACIG00000019392	thoc1	95	94.893	ENSNBRG00000005991	thoc1	94	94.893	Neolamprologus_brichardi
ENSACIG00000019392	thoc1	99	69.029	ENSNLEG00000006835	THOC1	97	69.797	Nomascus_leucogenys
ENSACIG00000019392	thoc1	86	77.427	ENSMEUG00000009756	THOC1	78	77.427	Notamacropus_eugenii
ENSACIG00000019392	thoc1	99	54.854	ENSOPRG00000001108	THOC1	97	55.243	Ochotona_princeps
ENSACIG00000019392	thoc1	99	65.978	ENSODEG00000006623	THOC1	96	66.938	Octodon_degus
ENSACIG00000019392	thoc1	95	93.485	ENSONIG00000009440	thoc1	96	90.236	Oreochromis_niloticus
ENSACIG00000019392	thoc1	99	69.183	ENSOCUG00000011601	THOC1	97	69.953	Oryctolagus_cuniculus
ENSACIG00000019392	thoc1	95	90.507	ENSORLG00000017629	thoc1	94	90.507	Oryzias_latipes
ENSACIG00000019392	thoc1	95	90.228	ENSORLG00020007567	thoc1	98	86.364	Oryzias_latipes_hni
ENSACIG00000019392	thoc1	95	90.228	ENSORLG00015007356	thoc1	97	90.228	Oryzias_latipes_hsok
ENSACIG00000019392	thoc1	95	89.251	ENSOMEG00000008200	thoc1	94	89.088	Oryzias_melastigma
ENSACIG00000019392	thoc1	99	66.410	ENSOGAG00000000470	THOC1	96	67.136	Otolemur_garnettii
ENSACIG00000019392	thoc1	99	69.372	ENSOARG00000009238	THOC1	92	74.020	Ovis_aries
ENSACIG00000019392	thoc1	99	69.029	ENSPPAG00000031812	THOC1	96	69.797	Pan_paniscus
ENSACIG00000019392	thoc1	99	68.567	ENSPPRG00000023794	THOC1	89	79.193	Panthera_pardus
ENSACIG00000019392	thoc1	99	68.567	ENSPTIG00000007469	THOC1	89	79.193	Panthera_tigris_altaica
ENSACIG00000019392	thoc1	99	68.140	ENSPTRG00000009816	THOC1	97	68.885	Pan_troglodytes
ENSACIG00000019392	thoc1	99	68.147	ENSPANG00000008665	THOC1	97	68.896	Papio_anubis
ENSACIG00000019392	thoc1	98	79.937	ENSPKIG00000005906	thoc1	98	80.408	Paramormyrops_kingsleyae
ENSACIG00000019392	thoc1	83	76.515	ENSPSIG00000007691	THOC1	97	76.515	Pelodiscus_sinensis
ENSACIG00000019392	thoc1	97	85.185	ENSPMGG00000008279	thoc1	97	85.737	Periophthalmus_magnuspinnatus
ENSACIG00000019392	thoc1	94	72.920	ENSPEMG00000021789	Thoc1	93	72.920	Peromyscus_maniculatus_bairdii
ENSACIG00000019392	thoc1	76	72.653	ENSPCIG00000026942	THOC1	97	72.653	Phascolarctos_cinereus
ENSACIG00000019392	thoc1	95	88.436	ENSPFOG00000011673	thoc1	98	84.639	Poecilia_formosa
ENSACIG00000019392	thoc1	95	88.762	ENSPLAG00000019648	thoc1	98	84.796	Poecilia_latipinna
ENSACIG00000019392	thoc1	95	88.599	ENSPMEG00000007083	thoc1	98	84.796	Poecilia_mexicana
ENSACIG00000019392	thoc1	95	88.925	ENSPREG00000006719	thoc1	94	88.925	Poecilia_reticulata
ENSACIG00000019392	thoc1	68	77.803	ENSPPYG00000009049	-	96	72.363	Pongo_abelii
ENSACIG00000019392	thoc1	99	61.801	ENSPCAG00000005320	THOC1	89	71.674	Procavia_capensis
ENSACIG00000019392	thoc1	99	68.875	ENSPCOG00000009234	THOC1	97	69.640	Propithecus_coquereli
ENSACIG00000019392	thoc1	99	67.593	ENSPVAG00000004007	THOC1	97	68.339	Pteropus_vampyrus
ENSACIG00000019392	thoc1	95	93.648	ENSPNYG00000019152	thoc1	98	90.439	Pundamilia_nyererei
ENSACIG00000019392	thoc1	95	84.502	ENSPNAG00000023390	thoc1	94	84.176	Pygocentrus_nattereri
ENSACIG00000019392	thoc1	85	58.076	ENSRNOG00000015332	Thoc1	96	58.076	Rattus_norvegicus
ENSACIG00000019392	thoc1	99	68.293	ENSRBIG00000033738	THOC1	97	71.277	Rhinopithecus_bieti
ENSACIG00000019392	thoc1	99	69.029	ENSRROG00000044988	THOC1	90	78.571	Rhinopithecus_roxellana
ENSACIG00000019392	thoc1	99	69.029	ENSSBOG00000016556	THOC1	96	69.797	Saimiri_boliviensis_boliviensis
ENSACIG00000019392	thoc1	99	68.875	ENSSHAG00000014829	THOC1	93	73.693	Sarcophilus_harrisii
ENSACIG00000019392	thoc1	95	85.993	ENSSFOG00015021527	thoc1	94	85.993	Scleropages_formosus
ENSACIG00000019392	thoc1	97	88.836	ENSSMAG00000018465	thoc1	97	88.836	Scophthalmus_maximus
ENSACIG00000019392	thoc1	95	91.694	ENSSDUG00000016810	thoc1	98	87.774	Seriola_dumerili
ENSACIG00000019392	thoc1	95	91.694	ENSSLDG00000015555	thoc1	94	91.694	Seriola_lalandi_dorsalis
ENSACIG00000019392	thoc1	90	73.256	ENSSARG00000006910	THOC1	85	75.403	Sorex_araneus
ENSACIG00000019392	thoc1	94	74.958	ENSSPUG00000007238	THOC1	93	74.958	Sphenodon_punctatus
ENSACIG00000019392	thoc1	95	90.879	ENSSPAG00000018847	thoc1	93	90.879	Stegastes_partitus
ENSACIG00000019392	thoc1	99	69.029	ENSSSCG00000025653	THOC1	91	69.797	Sus_scrofa
ENSACIG00000019392	thoc1	99	68.721	ENSTGUG00000010204	THOC1	93	73.409	Taeniopygia_guttata
ENSACIG00000019392	thoc1	95	89.739	ENSTRUG00000013518	thoc1	94	89.739	Takifugu_rubripes
ENSACIG00000019392	thoc1	95	89.251	ENSTNIG00000008473	thoc1	94	89.251	Tetraodon_nigroviridis
ENSACIG00000019392	thoc1	99	61.883	ENSTBEG00000016920	THOC1	97	62.539	Tupaia_belangeri
ENSACIG00000019392	thoc1	99	63.020	ENSTTRG00000016664	THOC1	97	63.693	Tursiops_truncatus
ENSACIG00000019392	thoc1	99	69.337	ENSUAMG00000002527	THOC1	98	69.401	Ursus_americanus
ENSACIG00000019392	thoc1	99	69.337	ENSUMAG00000019693	THOC1	97	70.110	Ursus_maritimus
ENSACIG00000019392	thoc1	57	80.124	ENSVPAG00000003726	-	54	80.124	Vicugna_pacos
ENSACIG00000019392	thoc1	99	69.029	ENSVVUG00000004384	THOC1	97	69.797	Vulpes_vulpes
ENSACIG00000019392	thoc1	94	71.521	ENSXETG00000003155	thoc1	91	71.521	Xenopus_tropicalis
ENSACIG00000019392	thoc1	96	82.609	ENSXCOG00000016085	thoc1	90	82.609	Xiphophorus_couchianus
ENSACIG00000019392	thoc1	95	88.925	ENSXMAG00000002353	thoc1	98	85.110	Xiphophorus_maculatus