EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000019578 (Gene tree)
Gene ID: -
Gene Symbol: prdm12b
Alias: zgc:101606
Full Name: PR domain containing 12b
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 3137 bases
Position: chrCCOE01000090.1:1264155-1267291
Accession: ZDB-GENE-041114-172
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000025280	zf-C2H2	PF00096.26	1.2e-10	1	2
ENSACIP00000025280	zf-C2H2	PF00096.26	1.2e-10	2	2
ENSACIP00000025280	zf-met	PF12874.7	7.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000025942	-	1125	-	ENSACIP00000025280	374 (aa)	-	-

Gene Model

Click here to download ENSACIG00000019578's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000019578's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000019578	prdm12b	88	32.727	ENSACIG00000022698	prdm14	61	32.727
ENSACIG00000019578	prdm12b	71	40.449	ENSACIG00000000406	prdm5	91	42.105
ENSACIG00000019578	prdm12b	100	79.949	ENSACIG00000005193	-	100	80.977

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000019578	prdm12b	93	79.656	ENSG00000130711	PRDM12	90	79.539	Homo_sapiens
ENSACIG00000019578	prdm12b	100	68.966	ENSAPOG00000018234	-	100	68.700	Acanthochromis_polyacanthus
ENSACIG00000019578	prdm12b	100	94.531	ENSAPOG00000016051	prdm12b	100	94.531	Acanthochromis_polyacanthus
ENSACIG00000019578	prdm12b	90	81.009	ENSAMEG00000016234	PRDM12	99	80.712	Ailuropoda_melanoleuca
ENSACIG00000019578	prdm12b	100	92.857	ENSAOCG00000015040	prdm12b	100	93.915	Amphiprion_ocellaris
ENSACIG00000019578	prdm12b	100	92.593	ENSAPEG00000015092	prdm12b	100	93.386	Amphiprion_percula
ENSACIG00000019578	prdm12b	100	72.658	ENSAPEG00000022849	-	99	73.165	Amphiprion_percula
ENSACIG00000019578	prdm12b	100	81.654	ENSATEG00000014595	-	100	80.879	Anabas_testudineus
ENSACIG00000019578	prdm12b	94	78.873	ENSANAG00000020616	PRDM12	97	79.539	Aotus_nancymaae
ENSACIG00000019578	prdm12b	100	90.133	ENSACLG00000011876	prdm12b	100	90.133	Astatotilapia_calliptera
ENSACIG00000019578	prdm12b	100	77.419	ENSACLG00000007631	-	100	77.861	Astatotilapia_calliptera
ENSACIG00000019578	prdm12b	100	82.152	ENSAMXG00000033665	prdm12b	100	82.152	Astyanax_mexicanus
ENSACIG00000019578	prdm12b	100	80.637	ENSAMXG00000008540	PRDM12	100	79.950	Astyanax_mexicanus
ENSACIG00000019578	prdm12b	93	79.943	ENSBTAG00000023797	PRDM12	99	75.798	Bos_taurus
ENSACIG00000019578	prdm12b	93	79.656	ENSCJAG00000020540	PRDM12	92	79.539	Callithrix_jacchus
ENSACIG00000019578	prdm12b	82	79.805	ENSCAFG00000023076	PRDM12	99	73.887	Canis_familiaris
ENSACIG00000019578	prdm12b	93	79.943	ENSCAFG00020024046	PRDM12	91	79.827	Canis_lupus_dingo
ENSACIG00000019578	prdm12b	93	79.943	ENSCHIG00000025005	PRDM12	99	75.597	Capra_hircus
ENSACIG00000019578	prdm12b	87	80.183	ENSCPOG00000005901	PRDM12	95	80.183	Cavia_porcellus
ENSACIG00000019578	prdm12b	93	79.656	ENSCCAG00000037485	PRDM12	91	79.539	Cebus_capucinus
ENSACIG00000019578	prdm12b	93	79.656	ENSCATG00000020327	PRDM12	91	79.539	Cercocebus_atys
ENSACIG00000019578	prdm12b	90	80.588	ENSCLAG00000005499	PRDM12	90	79.651	Chinchilla_lanigera
ENSACIG00000019578	prdm12b	93	79.656	ENSCSAG00000014756	PRDM12	99	74.406	Chlorocebus_sabaeus
ENSACIG00000019578	prdm12b	100	77.926	ENSCPBG00000022628	PRDM12	99	77.926	Chrysemys_picta_bellii
ENSACIG00000019578	prdm12b	93	79.943	ENSCGRG00001015005	Prdm12	90	79.827	Cricetulus_griseus_chok1gshd
ENSACIG00000019578	prdm12b	100	80.000	ENSCVAG00000000944	-	100	80.256	Cyprinodon_variegatus
ENSACIG00000019578	prdm12b	100	88.889	ENSCVAG00000017166	prdm12b	100	89.418	Cyprinodon_variegatus
ENSACIG00000019578	prdm12b	100	83.069	ENSDARG00000007430	prdm12b	100	82.540	Danio_rerio
ENSACIG00000019578	prdm12b	93	79.429	ENSDNOG00000042302	PRDM12	99	75.332	Dasypus_novemcinctus
ENSACIG00000019578	prdm12b	88	64.244	ENSEBUG00000016780	prdm12b	80	65.000	Eptatretus_burgeri
ENSACIG00000019578	prdm12b	94	78.873	ENSEASG00005008472	PRDM12	99	75.000	Equus_asinus_asinus
ENSACIG00000019578	prdm12b	94	78.873	ENSECAG00000005933	PRDM12	99	75.000	Equus_caballus
ENSACIG00000019578	prdm12b	100	81.579	ENSELUG00000009905	prdm12b	100	80.526	Esox_lucius
ENSACIG00000019578	prdm12b	100	86.207	ENSELUG00000013674	PRDM12	100	86.207	Esox_lucius
ENSACIG00000019578	prdm12b	93	79.943	ENSFCAG00000043086	PRDM12	91	79.827	Felis_catus
ENSACIG00000019578	prdm12b	100	78.723	ENSFALG00000001445	PRDM12	89	78.457	Ficedula_albicollis
ENSACIG00000019578	prdm12b	100	88.158	ENSFHEG00000003944	prdm12b	100	88.684	Fundulus_heteroclitus
ENSACIG00000019578	prdm12b	100	76.119	ENSFHEG00000007746	-	100	75.439	Fundulus_heteroclitus
ENSACIG00000019578	prdm12b	100	83.333	ENSGMOG00000011797	prdm12b	100	82.292	Gadus_morhua
ENSACIG00000019578	prdm12b	100	78.723	ENSGALG00000003895	PRDM12	99	78.457	Gallus_gallus
ENSACIG00000019578	prdm12b	100	88.714	ENSGAFG00000010827	prdm12b	99	88.976	Gambusia_affinis
ENSACIG00000019578	prdm12b	100	88.654	ENSGACG00000016713	prdm12b	99	87.599	Gasterosteus_aculeatus
ENSACIG00000019578	prdm12b	100	77.926	ENSGAGG00000014083	PRDM12	99	77.926	Gopherus_agassizii
ENSACIG00000019578	prdm12b	93	79.370	ENSGGOG00000010568	PRDM12	99	74.278	Gorilla_gorilla
ENSACIG00000019578	prdm12b	100	95.200	ENSHBUG00000022878	prdm12b	100	94.400	Haplochromis_burtoni
ENSACIG00000019578	prdm12b	100	77.419	ENSHBUG00000022537	-	93	77.612	Haplochromis_burtoni
ENSACIG00000019578	prdm12b	90	80.882	ENSHGLG00000013939	PRDM12	99	74.211	Heterocephalus_glaber_female
ENSACIG00000019578	prdm12b	90	87.826	ENSHCOG00000003663	prdm12b	100	80.253	Hippocampus_comes
ENSACIG00000019578	prdm12b	100	71.842	ENSHCOG00000021167	-	100	70.526	Hippocampus_comes
ENSACIG00000019578	prdm12b	100	77.807	ENSIPUG00000019544	PRDM12	100	77.807	Ictalurus_punctatus
ENSACIG00000019578	prdm12b	100	83.113	ENSIPUG00000017053	prdm12b	100	82.850	Ictalurus_punctatus
ENSACIG00000019578	prdm12b	95	78.552	ENSSTOG00000005986	PRDM12	87	79.827	Ictidomys_tridecemlineatus
ENSACIG00000019578	prdm12b	91	80.758	ENSJJAG00000005424	Prdm12	99	80.233	Jaculus_jaculus
ENSACIG00000019578	prdm12b	100	82.963	ENSKMAG00000016921	prdm12b	100	83.704	Kryptolebias_marmoratus
ENSACIG00000019578	prdm12b	94	80.000	ENSKMAG00000021205	-	94	78.552	Kryptolebias_marmoratus
ENSACIG00000019578	prdm12b	100	80.679	ENSLBEG00000007776	-	100	79.112	Labrus_bergylta
ENSACIG00000019578	prdm12b	100	87.532	ENSLBEG00000017769	prdm12b	100	87.013	Labrus_bergylta
ENSACIG00000019578	prdm12b	100	79.255	ENSLACG00000017560	PRDM12	99	78.723	Latimeria_chalumnae
ENSACIG00000019578	prdm12b	100	85.039	ENSLOCG00000005429	prdm12b	100	85.302	Lepisosteus_oculatus
ENSACIG00000019578	prdm12b	93	80.692	ENSLAFG00000006979	PRDM12	90	78.754	Loxodonta_africana
ENSACIG00000019578	prdm12b	93	79.656	ENSMFAG00000040322	PRDM12	90	79.539	Macaca_fascicularis
ENSACIG00000019578	prdm12b	93	79.656	ENSMNEG00000037234	PRDM12	91	79.539	Macaca_nemestrina
ENSACIG00000019578	prdm12b	100	74.194	ENSMAMG00000018988	-	100	74.627	Mastacembelus_armatus
ENSACIG00000019578	prdm12b	100	92.084	ENSMAMG00000013212	prdm12b	100	91.557	Mastacembelus_armatus
ENSACIG00000019578	prdm12b	100	77.037	ENSMZEG00005000415	PRDM12	100	77.475	Maylandia_zebra
ENSACIG00000019578	prdm12b	98	78.649	ENSMGAG00000005438	PRDM12	98	78.378	Meleagris_gallopavo
ENSACIG00000019578	prdm12b	100	75.526	ENSMAUG00000013040	Prdm12	99	74.474	Mesocricetus_auratus
ENSACIG00000019578	prdm12b	94	79.320	ENSMICG00000015480	PRDM12	91	79.827	Microcebus_murinus
ENSACIG00000019578	prdm12b	97	78.297	ENSMOCG00000021026	Prdm12	90	80.115	Microtus_ochrogaster
ENSACIG00000019578	prdm12b	100	77.719	ENSMODG00000012108	PRDM12	99	77.454	Monodelphis_domestica
ENSACIG00000019578	prdm12b	100	75.726	ENSMALG00000021901	prdm12b	99	74.934	Monopterus_albus
ENSACIG00000019578	prdm12b	93	79.943	MGP_CAROLIEiJ_G0023414	Prdm12	99	74.737	Mus_caroli
ENSACIG00000019578	prdm12b	93	79.943	ENSMUSG00000079466	Prdm12	99	74.737	Mus_musculus
ENSACIG00000019578	prdm12b	93	79.943	MGP_PahariEiJ_G0024871	Prdm12	99	74.737	Mus_pahari
ENSACIG00000019578	prdm12b	93	79.943	MGP_SPRETEiJ_G0024331	Prdm12	99	74.737	Mus_spretus
ENSACIG00000019578	prdm12b	90	81.471	ENSNGAG00000018480	Prdm12	93	80.233	Nannospalax_galili
ENSACIG00000019578	prdm12b	100	96.267	ENSNBRG00000006727	prdm12b	100	96.267	Neolamprologus_brichardi
ENSACIG00000019578	prdm12b	100	73.890	ENSNBRG00000024312	-	100	74.413	Neolamprologus_brichardi
ENSACIG00000019578	prdm12b	100	70.027	ENSMEUG00000003828	PRDM12	86	85.789	Notamacropus_eugenii
ENSACIG00000019578	prdm12b	90	81.471	ENSOPRG00000008680	PRDM12	99	80.233	Ochotona_princeps
ENSACIG00000019578	prdm12b	94	78.310	ENSODEG00000016282	PRDM12	62	79.942	Octodon_degus
ENSACIG00000019578	prdm12b	63	75.314	ENSOANG00000001043	PRDM12	100	74.895	Ornithorhynchus_anatinus
ENSACIG00000019578	prdm12b	89	77.246	ENSOCUG00000008241	PRDM12	96	80.317	Oryctolagus_cuniculus
ENSACIG00000019578	prdm12b	100	78.680	ENSORLG00000017558	-	100	78.934	Oryzias_latipes
ENSACIG00000019578	prdm12b	100	88.889	ENSORLG00000007114	prdm12b	99	88.889	Oryzias_latipes
ENSACIG00000019578	prdm12b	100	87.632	ENSORLG00020019565	prdm12b	99	88.684	Oryzias_latipes_hni
ENSACIG00000019578	prdm12b	100	78.680	ENSORLG00020013167	-	100	78.680	Oryzias_latipes_hni
ENSACIG00000019578	prdm12b	100	88.918	ENSORLG00015007621	prdm12b	99	88.918	Oryzias_latipes_hsok
ENSACIG00000019578	prdm12b	100	78.680	ENSORLG00015003435	-	100	78.934	Oryzias_latipes_hsok
ENSACIG00000019578	prdm12b	100	80.311	ENSOMEG00000007762	-	100	79.016	Oryzias_melastigma
ENSACIG00000019578	prdm12b	100	88.743	ENSOMEG00000004134	prdm12b	99	88.482	Oryzias_melastigma
ENSACIG00000019578	prdm12b	92	80.115	ENSOGAG00000007557	PRDM12	99	79.827	Otolemur_garnettii
ENSACIG00000019578	prdm12b	80	78.808	ENSPPAG00000031506	-	99	77.597	Pan_paniscus
ENSACIG00000019578	prdm12b	98	70.699	ENSPPRG00000023024	PRDM12	85	73.851	Panthera_pardus
ENSACIG00000019578	prdm12b	93	79.656	ENSPTRG00000043324	-	99	74.541	Pan_troglodytes
ENSACIG00000019578	prdm12b	93	79.656	ENSPTRG00000021475	PRDM12	99	74.541	Pan_troglodytes
ENSACIG00000019578	prdm12b	93	79.656	ENSPANG00000025967	PRDM12	91	79.539	Papio_anubis
ENSACIG00000019578	prdm12b	100	85.714	ENSPKIG00000007228	prdm12b	100	85.979	Paramormyrops_kingsleyae
ENSACIG00000019578	prdm12b	91	81.287	ENSPKIG00000004305	PRDM12	95	81.287	Paramormyrops_kingsleyae
ENSACIG00000019578	prdm12b	100	78.191	ENSPSIG00000006739	PRDM12	99	78.191	Pelodiscus_sinensis
ENSACIG00000019578	prdm12b	100	89.096	ENSPMGG00000008867	prdm12b	99	89.096	Periophthalmus_magnuspinnatus
ENSACIG00000019578	prdm12b	100	74.747	ENSPMGG00000002356	-	100	74.242	Periophthalmus_magnuspinnatus
ENSACIG00000019578	prdm12b	97	77.596	ENSPEMG00000009969	Prdm12	91	79.827	Peromyscus_maniculatus_bairdii
ENSACIG00000019578	prdm12b	100	77.719	ENSPCIG00000024119	PRDM12	99	77.454	Phascolarctos_cinereus
ENSACIG00000019578	prdm12b	100	89.446	ENSPFOG00000019841	prdm12b	100	88.127	Poecilia_formosa
ENSACIG00000019578	prdm12b	100	87.760	ENSPLAG00000016626	prdm12b	99	88.021	Poecilia_latipinna
ENSACIG00000019578	prdm12b	96	88.108	ENSPMEG00000016698	prdm12b	99	88.108	Poecilia_mexicana
ENSACIG00000019578	prdm12b	100	87.532	ENSPREG00000015073	prdm12b	99	88.052	Poecilia_reticulata
ENSACIG00000019578	prdm12b	95	74.795	ENSPREG00000003211	-	94	74.795	Poecilia_reticulata
ENSACIG00000019578	prdm12b	96	78.116	ENSPPYG00000019694	PRDM12	94	79.539	Pongo_abelii
ENSACIG00000019578	prdm12b	93	79.943	ENSPCOG00000022255	PRDM12	90	79.827	Propithecus_coquereli
ENSACIG00000019578	prdm12b	93	79.943	ENSPVAG00000001511	PRDM12	99	74.803	Pteropus_vampyrus
ENSACIG00000019578	prdm12b	100	77.037	ENSPNYG00000013589	-	100	77.475	Pundamilia_nyererei
ENSACIG00000019578	prdm12b	100	94.667	ENSPNYG00000009607	prdm12b	100	94.667	Pundamilia_nyererei
ENSACIG00000019578	prdm12b	100	82.586	ENSPNAG00000024532	prdm12b	100	82.586	Pygocentrus_nattereri
ENSACIG00000019578	prdm12b	100	78.646	ENSPNAG00000013396	PRDM12	100	77.344	Pygocentrus_nattereri
ENSACIG00000019578	prdm12b	93	79.943	ENSRNOG00000009218	Prdm12	99	74.737	Rattus_norvegicus
ENSACIG00000019578	prdm12b	88	81.024	ENSRBIG00000042712	PRDM12	90	78.963	Rhinopithecus_bieti
ENSACIG00000019578	prdm12b	89	81.250	ENSRROG00000043554	PRDM12	99	81.250	Rhinopithecus_roxellana
ENSACIG00000019578	prdm12b	100	77.249	ENSSHAG00000015972	PRDM12	99	76.984	Sarcophilus_harrisii
ENSACIG00000019578	prdm12b	100	87.661	ENSSMAG00000003754	prdm12b	100	87.918	Scophthalmus_maximus
ENSACIG00000019578	prdm12b	100	92.126	ENSSDUG00000023498	prdm12b	100	92.388	Seriola_dumerili
ENSACIG00000019578	prdm12b	100	81.818	ENSSDUG00000019071	-	100	81.558	Seriola_dumerili
ENSACIG00000019578	prdm12b	100	77.660	ENSSLDG00000013562	-	100	77.128	Seriola_lalandi_dorsalis
ENSACIG00000019578	prdm12b	100	92.388	ENSSLDG00000009557	prdm12b	100	92.388	Seriola_lalandi_dorsalis
ENSACIG00000019578	prdm12b	100	78.723	ENSSPUG00000013424	PRDM12	99	78.457	Sphenodon_punctatus
ENSACIG00000019578	prdm12b	100	92.593	ENSSPAG00000018824	prdm12b	100	93.651	Stegastes_partitus
ENSACIG00000019578	prdm12b	100	74.352	ENSSPAG00000022420	-	100	73.834	Stegastes_partitus
ENSACIG00000019578	prdm12b	93	79.943	ENSSSCG00000005703	PRDM12	91	79.827	Sus_scrofa
ENSACIG00000019578	prdm12b	100	78.836	ENSTRUG00000013239	-	100	78.571	Takifugu_rubripes
ENSACIG00000019578	prdm12b	100	88.594	ENSTRUG00000018659	prdm12b	100	88.594	Takifugu_rubripes
ENSACIG00000019578	prdm12b	100	75.926	ENSTNIG00000005859	-	99	74.603	Tetraodon_nigroviridis
ENSACIG00000019578	prdm12b	100	87.533	ENSTNIG00000009020	prdm12b	99	87.533	Tetraodon_nigroviridis
ENSACIG00000019578	prdm12b	93	79.943	ENSUAMG00000009653	PRDM12	92	79.827	Ursus_americanus
ENSACIG00000019578	prdm12b	92	80.115	ENSVVUG00000027662	PRDM12	79	79.827	Vulpes_vulpes
ENSACIG00000019578	prdm12b	100	89.446	ENSXCOG00000002836	prdm12b	99	89.710	Xiphophorus_couchianus
ENSACIG00000019578	prdm12b	100	88.743	ENSXMAG00000005537	prdm12b	100	89.005	Xiphophorus_maculatus
ENSACIG00000019578	prdm12b	100	77.778	ENSXMAG00000028012	-	100	77.750	Xiphophorus_maculatus