EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000019643 (Gene tree)
Gene ID: -
Gene Symbol: rtca
Alias: cb158|rtcd1|sb:cb158|wu:fc62c03
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 7636 bases
Position: chrCCOE01000606.1:423987-431622
Accession: ZDB-GENE-030131-9687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000025372	RTC	PF01137.21	1.7e-88	1	1
ENSACIP00000025372	RTC_insert	PF05189.13	4.7e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000026037	-	1095	-	ENSACIP00000025372	364 (aa)	-	-

Gene Model

Click here to download ENSACIG00000019643's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000019643's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000019643	rtca	99	71.745	ENSG00000137996	RTCA	99	71.745	Homo_sapiens
ENSACIG00000019643	rtca	100	92.582	ENSAPOG00000001345	rtca	99	92.582	Acanthochromis_polyacanthus
ENSACIG00000019643	rtca	73	72.862	ENSAMEG00000008855	RTCA	100	72.862	Ailuropoda_melanoleuca
ENSACIG00000019643	rtca	100	93.407	ENSAOCG00000014979	rtca	99	93.407	Amphiprion_ocellaris
ENSACIG00000019643	rtca	100	93.132	ENSAPEG00000006945	rtca	99	93.132	Amphiprion_percula
ENSACIG00000019643	rtca	96	92.264	ENSATEG00000006315	rtca	96	92.264	Anabas_testudineus
ENSACIG00000019643	rtca	96	66.572	ENSAPLG00000015430	RTCA	100	66.572	Anas_platyrhynchos
ENSACIG00000019643	rtca	99	71.745	ENSANAG00000025446	RTCA	99	71.745	Aotus_nancymaae
ENSACIG00000019643	rtca	100	95.604	ENSACLG00000020770	rtca	99	95.604	Astatotilapia_calliptera
ENSACIG00000019643	rtca	98	81.564	ENSAMXG00000043271	rtca	98	81.564	Astyanax_mexicanus
ENSACIG00000019643	rtca	99	72.299	ENSBTAG00000006321	RTCA	99	72.299	Bos_taurus
ENSACIG00000019643	rtca	99	72.022	ENSCJAG00000003398	RTCA	99	72.022	Callithrix_jacchus
ENSACIG00000019643	rtca	99	71.745	ENSCAFG00000020010	RTCA	67	71.745	Canis_familiaris
ENSACIG00000019643	rtca	99	71.745	ENSCAFG00020011528	RTCA	56	71.745	Canis_lupus_dingo
ENSACIG00000019643	rtca	99	72.022	ENSCHIG00000018937	RTCA	99	72.022	Capra_hircus
ENSACIG00000019643	rtca	99	72.099	ENSTSYG00000011305	RTCA	99	72.099	Carlito_syrichta
ENSACIG00000019643	rtca	99	71.468	ENSCCAG00000021844	RTCA	98	72.866	Cebus_capucinus
ENSACIG00000019643	rtca	99	69.786	ENSCATG00000019364	RTCA	100	71.845	Cercocebus_atys
ENSACIG00000019643	rtca	87	72.468	ENSCLAG00000006125	RTCA	100	72.468	Chinchilla_lanigera
ENSACIG00000019643	rtca	99	72.022	ENSCSAG00000001509	RTCA	99	72.022	Chlorocebus_sabaeus
ENSACIG00000019643	rtca	99	70.637	ENSCHOG00000005211	RTCA	99	70.637	Choloepus_hoffmanni
ENSACIG00000019643	rtca	100	67.671	ENSCPBG00000026658	RTCA	100	67.671	Chrysemys_picta_bellii
ENSACIG00000019643	rtca	98	55.153	ENSCING00000007875	-	98	55.153	Ciona_intestinalis
ENSACIG00000019643	rtca	98	54.596	ENSCSAVG00000007269	-	98	54.596	Ciona_savignyi
ENSACIG00000019643	rtca	99	71.745	ENSCANG00000040106	RTCA	99	71.745	Colobus_angolensis_palliatus
ENSACIG00000019643	rtca	73	72.119	ENSCGRG00001013163	Rtca	85	72.119	Cricetulus_griseus_chok1gshd
ENSACIG00000019643	rtca	98	85.196	ENSCSEG00000000530	rtca	96	85.196	Cynoglossus_semilaevis
ENSACIG00000019643	rtca	100	74.044	ENSCVAG00000021809	rtca	100	74.044	Cyprinodon_variegatus
ENSACIG00000019643	rtca	100	80.220	ENSDARG00000002215	rtca	100	80.220	Danio_rerio
ENSACIG00000019643	rtca	99	72.299	ENSDNOG00000000456	RTCA	99	72.299	Dasypus_novemcinctus
ENSACIG00000019643	rtca	99	71.745	ENSDORG00000005448	Rtca	99	71.745	Dipodomys_ordii
ENSACIG00000019643	rtca	98	40.336	FBgn0025630	Rtca	98	40.336	Drosophila_melanogaster
ENSACIG00000019643	rtca	94	51.453	ENSEBUG00000008556	rtca	95	51.453	Eptatretus_burgeri
ENSACIG00000019643	rtca	99	71.745	ENSEASG00005015926	RTCA	99	71.745	Equus_asinus_asinus
ENSACIG00000019643	rtca	99	71.745	ENSECAG00000019831	RTCA	99	71.745	Equus_caballus
ENSACIG00000019643	rtca	90	65.396	ENSEEUG00000001165	RTCA	99	65.396	Erinaceus_europaeus
ENSACIG00000019643	rtca	99	79.006	ENSELUG00000003741	rtca	99	79.006	Esox_lucius
ENSACIG00000019643	rtca	99	72.099	ENSFCAG00000024460	RTCA	99	72.099	Felis_catus
ENSACIG00000019643	rtca	93	68.047	ENSFALG00000002443	RTCA	91	68.047	Ficedula_albicollis
ENSACIG00000019643	rtca	99	71.191	ENSFDAG00000012070	-	99	71.191	Fukomys_damarensis
ENSACIG00000019643	rtca	97	57.143	ENSFDAG00000016084	-	98	57.143	Fukomys_damarensis
ENSACIG00000019643	rtca	58	85.849	ENSFHEG00000002868	rtca	92	82.791	Fundulus_heteroclitus
ENSACIG00000019643	rtca	100	79.670	ENSGMOG00000013264	rtca	100	79.670	Gadus_morhua
ENSACIG00000019643	rtca	100	67.397	ENSGALG00000005277	RTCA	100	67.397	Gallus_gallus
ENSACIG00000019643	rtca	100	90.110	ENSGAFG00000011853	rtca	99	90.110	Gambusia_affinis
ENSACIG00000019643	rtca	100	87.912	ENSGACG00000013497	rtca	100	87.912	Gasterosteus_aculeatus
ENSACIG00000019643	rtca	80	67.235	ENSGAGG00000023306	RTCA	100	67.235	Gopherus_agassizii
ENSACIG00000019643	rtca	99	71.191	ENSGGOG00000044018	-	99	71.191	Gorilla_gorilla
ENSACIG00000019643	rtca	99	71.745	ENSGGOG00000009546	-	100	71.197	Gorilla_gorilla
ENSACIG00000019643	rtca	100	95.330	ENSHBUG00000002114	rtca	99	95.330	Haplochromis_burtoni
ENSACIG00000019643	rtca	99	71.468	ENSHGLG00000002617	RTCA	99	71.468	Heterocephalus_glaber_female
ENSACIG00000019643	rtca	99	71.468	ENSHGLG00100006056	RTCA	99	71.468	Heterocephalus_glaber_male
ENSACIG00000019643	rtca	100	77.473	ENSHCOG00000020628	rtca	89	77.473	Hippocampus_comes
ENSACIG00000019643	rtca	100	79.121	ENSIPUG00000024803	rtca	100	79.121	Ictalurus_punctatus
ENSACIG00000019643	rtca	99	67.590	ENSSTOG00000013528	-	99	67.590	Ictidomys_tridecemlineatus
ENSACIG00000019643	rtca	100	62.842	ENSSTOG00000033099	-	100	62.842	Ictidomys_tridecemlineatus
ENSACIG00000019643	rtca	99	51.667	ENSJJAG00000016178	Rtca	98	51.667	Jaculus_jaculus
ENSACIG00000019643	rtca	100	89.011	ENSKMAG00000006651	rtca	99	89.011	Kryptolebias_marmoratus
ENSACIG00000019643	rtca	88	87.147	ENSLBEG00000002448	-	99	87.147	Labrus_bergylta
ENSACIG00000019643	rtca	99	88.056	ENSLBEG00000028971	rtca	99	88.056	Labrus_bergylta
ENSACIG00000019643	rtca	100	67.945	ENSLACG00000013666	RTCA	100	67.945	Latimeria_chalumnae
ENSACIG00000019643	rtca	100	75.068	ENSLOCG00000000093	rtca	99	75.068	Lepisosteus_oculatus
ENSACIG00000019643	rtca	99	71.191	ENSLAFG00000001473	RTCA	99	71.191	Loxodonta_africana
ENSACIG00000019643	rtca	99	72.022	ENSMFAG00000034132	RTCA	99	72.022	Macaca_fascicularis
ENSACIG00000019643	rtca	99	72.022	ENSMMUG00000019105	RTCA	99	72.022	Macaca_mulatta
ENSACIG00000019643	rtca	84	71.521	ENSMNEG00000037163	RTCA	100	71.521	Macaca_nemestrina
ENSACIG00000019643	rtca	99	59.280	ENSMLEG00000042151	RTCA	98	59.280	Mandrillus_leucophaeus
ENSACIG00000019643	rtca	100	93.407	ENSMAMG00000016536	rtca	100	93.407	Mastacembelus_armatus
ENSACIG00000019643	rtca	100	95.604	ENSMZEG00005017945	rtca	99	95.604	Maylandia_zebra
ENSACIG00000019643	rtca	87	67.296	ENSMGAG00000006892	RTCA	99	67.296	Meleagris_gallopavo
ENSACIG00000019643	rtca	100	71.311	ENSMAUG00000008488	Rtca	100	71.311	Mesocricetus_auratus
ENSACIG00000019643	rtca	84	72.492	ENSMICG00000008643	RTCA	100	72.492	Microcebus_murinus
ENSACIG00000019643	rtca	100	70.219	ENSMOCG00000016660	Rtca	100	70.219	Microtus_ochrogaster
ENSACIG00000019643	rtca	84	90.228	ENSMMOG00000007750	rtca	100	90.228	Mola_mola
ENSACIG00000019643	rtca	99	71.468	ENSMODG00000003557	RTCA	99	71.468	Monodelphis_domestica
ENSACIG00000019643	rtca	100	92.857	ENSMALG00000020844	rtca	100	92.857	Monopterus_albus
ENSACIG00000019643	rtca	100	70.219	MGP_CAROLIEiJ_G0025565	Rtca	100	70.423	Mus_caroli
ENSACIG00000019643	rtca	100	69.945	ENSMUSG00000000339	Rtca	100	70.423	Mus_musculus
ENSACIG00000019643	rtca	100	70.219	MGP_PahariEiJ_G0027011	Rtca	100	70.423	Mus_pahari
ENSACIG00000019643	rtca	100	70.219	MGP_SPRETEiJ_G0026515	Rtca	100	70.423	Mus_spretus
ENSACIG00000019643	rtca	100	71.311	ENSMPUG00000012119	RTCA	100	71.311	Mustela_putorius_furo
ENSACIG00000019643	rtca	99	68.320	ENSMLUG00000009922	RTCA	99	68.320	Myotis_lucifugus
ENSACIG00000019643	rtca	99	71.191	ENSNGAG00000011540	Rtca	98	71.191	Nannospalax_galili
ENSACIG00000019643	rtca	100	95.330	ENSNBRG00000003062	rtca	99	95.330	Neolamprologus_brichardi
ENSACIG00000019643	rtca	99	72.022	ENSNLEG00000031426	RTCA	99	72.022	Nomascus_leucogenys
ENSACIG00000019643	rtca	73	68.519	ENSOPRG00000012092	RTCA	71	68.519	Ochotona_princeps
ENSACIG00000019643	rtca	95	71.552	ENSODEG00000006990	RTCA	96	71.795	Octodon_degus
ENSACIG00000019643	rtca	100	95.604	ENSONIG00000007753	rtca	99	95.604	Oreochromis_niloticus
ENSACIG00000019643	rtca	87	71.924	ENSOANG00000012055	RTCA	98	71.924	Ornithorhynchus_anatinus
ENSACIG00000019643	rtca	100	71.390	ENSOCUG00000014247	RTCA	100	71.390	Oryctolagus_cuniculus
ENSACIG00000019643	rtca	100	88.736	ENSORLG00000013605	rtca	100	88.736	Oryzias_latipes
ENSACIG00000019643	rtca	100	89.011	ENSORLG00020001904	rtca	100	89.011	Oryzias_latipes_hni
ENSACIG00000019643	rtca	100	88.736	ENSORLG00015021064	rtca	100	88.736	Oryzias_latipes_hsok
ENSACIG00000019643	rtca	100	88.187	ENSOMEG00000000756	rtca	100	88.187	Oryzias_melastigma
ENSACIG00000019643	rtca	99	65.928	ENSOGAG00000005627	RTCA	99	65.928	Otolemur_garnettii
ENSACIG00000019643	rtca	87	71.698	ENSOARG00000018122	RTCA	100	71.698	Ovis_aries
ENSACIG00000019643	rtca	99	68.984	ENSPPAG00000035119	RTCA	100	70.874	Pan_paniscus
ENSACIG00000019643	rtca	99	72.376	ENSPPRG00000000350	RTCA	99	72.376	Panthera_pardus
ENSACIG00000019643	rtca	99	71.823	ENSPTIG00000012816	RTCA	99	71.823	Panthera_tigris_altaica
ENSACIG00000019643	rtca	99	68.984	ENSPTRG00000001004	RTCA	100	70.874	Pan_troglodytes
ENSACIG00000019643	rtca	100	71.311	ENSPANG00000000346	RTCA	100	71.311	Papio_anubis
ENSACIG00000019643	rtca	100	80.495	ENSPKIG00000001653	rtca	100	80.495	Paramormyrops_kingsleyae
ENSACIG00000019643	rtca	100	67.123	ENSPSIG00000011408	RTCA	100	67.123	Pelodiscus_sinensis
ENSACIG00000019643	rtca	100	70.492	ENSPEMG00000018582	Rtca	100	70.492	Peromyscus_maniculatus_bairdii
ENSACIG00000019643	rtca	99	56.233	ENSPMAG00000009110	rtca	98	56.233	Petromyzon_marinus
ENSACIG00000019643	rtca	99	71.468	ENSPCIG00000007684	RTCA	99	71.468	Phascolarctos_cinereus
ENSACIG00000019643	rtca	100	91.507	ENSPFOG00000004824	rtca	100	91.507	Poecilia_formosa
ENSACIG00000019643	rtca	100	91.484	ENSPLAG00000011753	rtca	99	91.484	Poecilia_latipinna
ENSACIG00000019643	rtca	100	91.484	ENSPMEG00000020469	rtca	99	91.484	Poecilia_mexicana
ENSACIG00000019643	rtca	100	90.659	ENSPREG00000001365	rtca	99	90.659	Poecilia_reticulata
ENSACIG00000019643	rtca	99	72.299	ENSPPYG00000001115	RTCA	99	72.299	Pongo_abelii
ENSACIG00000019643	rtca	100	68.665	ENSPCAG00000005076	RTCA	100	68.665	Procavia_capensis
ENSACIG00000019643	rtca	99	72.576	ENSPCOG00000005603	RTCA	99	72.576	Propithecus_coquereli
ENSACIG00000019643	rtca	99	68.267	ENSPVAG00000009478	RTCA	99	68.267	Pteropus_vampyrus
ENSACIG00000019643	rtca	100	95.604	ENSPNYG00000004722	rtca	99	95.604	Pundamilia_nyererei
ENSACIG00000019643	rtca	100	79.945	ENSPNAG00000022270	rtca	100	79.945	Pygocentrus_nattereri
ENSACIG00000019643	rtca	100	69.399	ENSRNOG00000014575	Rtca	100	69.399	Rattus_norvegicus
ENSACIG00000019643	rtca	99	68.984	ENSRBIG00000041180	RTCA	100	70.874	Rhinopithecus_bieti
ENSACIG00000019643	rtca	99	71.468	ENSRROG00000024929	RTCA	99	71.468	Rhinopithecus_roxellana
ENSACIG00000019643	rtca	99	71.191	ENSSBOG00000028626	RTCA	99	71.191	Saimiri_boliviensis_boliviensis
ENSACIG00000019643	rtca	99	71.468	ENSSHAG00000001758	RTCA	99	71.468	Sarcophilus_harrisii
ENSACIG00000019643	rtca	99	85.556	ENSSMAG00000014680	rtca	97	85.556	Scophthalmus_maximus
ENSACIG00000019643	rtca	98	91.620	ENSSDUG00000015585	rtca	98	90.884	Seriola_dumerili
ENSACIG00000019643	rtca	96	91.691	ENSSLDG00000018985	rtca	95	91.691	Seriola_lalandi_dorsalis
ENSACIG00000019643	rtca	87	65.931	ENSSARG00000013993	RTCA	100	65.931	Sorex_araneus
ENSACIG00000019643	rtca	100	92.857	ENSSPAG00000011938	rtca	99	92.857	Stegastes_partitus
ENSACIG00000019643	rtca	99	72.022	ENSSSCG00000006865	RTCA	99	72.022	Sus_scrofa
ENSACIG00000019643	rtca	100	68.767	ENSTGUG00000005154	RTCA	100	68.767	Taeniopygia_guttata
ENSACIG00000019643	rtca	100	88.736	ENSTRUG00000008799	rtca	100	88.736	Takifugu_rubripes
ENSACIG00000019643	rtca	100	86.813	ENSTNIG00000004725	rtca	100	86.813	Tetraodon_nigroviridis
ENSACIG00000019643	rtca	58	57.143	ENSTBEG00000000943	RTCA	59	57.143	Tupaia_belangeri
ENSACIG00000019643	rtca	99	69.519	ENSTTRG00000015327	RTCA	99	69.519	Tursiops_truncatus
ENSACIG00000019643	rtca	93	71.302	ENSUAMG00000017265	RTCA	95	71.302	Ursus_americanus
ENSACIG00000019643	rtca	99	71.468	ENSUMAG00000007881	RTCA	99	71.468	Ursus_maritimus
ENSACIG00000019643	rtca	87	63.407	ENSVPAG00000001039	RTCA	84	63.407	Vicugna_pacos
ENSACIG00000019643	rtca	99	71.745	ENSVVUG00000022041	RTCA	67	71.745	Vulpes_vulpes
ENSACIG00000019643	rtca	98	58.172	ENSXETG00000031661	RTCA	98	58.172	Xenopus_tropicalis
ENSACIG00000019643	rtca	100	79.121	ENSXCOG00000008002	rtca	100	79.121	Xiphophorus_couchianus
ENSACIG00000019643	rtca	100	90.385	ENSXMAG00000005482	rtca	99	90.385	Xiphophorus_maculatus