EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000019671 (Gene tree)
Gene ID: -
Gene Symbol: chd3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 34413 bases
Position: chrCCOE01000491.1:714011-748423
Accession: ZDB-GENE-121031-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000025447	ResIII	PF04851.15	4.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000026113	-	4689	-	ENSACIP00000025447	1562 (aa)	-	-

Gene Model

Click here to download ENSACIG00000019671's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000019671's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000019671	chd3	99	66.401	ENSACIG00000012387	-	90	66.136
ENSACIG00000019671	chd3	96	88.750	ENSACIG00000012582	chd5	84	87.879
ENSACIG00000019671	chd3	99	83.750	ENSACIG00000019310	chd4a	92	69.574

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000019671	chd3	99	83.516	ENSG00000170004	CHD3	81	83.516	Homo_sapiens
ENSACIG00000019671	chd3	99	92.077	ENSAPOG00000005614	chd3	97	92.077	Acanthochromis_polyacanthus
ENSACIG00000019671	chd3	71	84.890	ENSAMEG00000003025	-	82	84.890	Ailuropoda_melanoleuca
ENSACIG00000019671	chd3	99	96.757	ENSAOCG00000023784	chd3	99	94.773	Amphiprion_ocellaris
ENSACIG00000019671	chd3	99	97.297	ENSAPEG00000006341	chd3	77	97.297	Amphiprion_percula
ENSACIG00000019671	chd3	99	94.595	ENSATEG00000000848	chd3	95	94.118	Anabas_testudineus
ENSACIG00000019671	chd3	99	84.043	ENSACAG00000004276	CHD3	80	84.656	Anolis_carolinensis
ENSACIG00000019671	chd3	99	83.516	ENSANAG00000034323	CHD3	87	78.782	Aotus_nancymaae
ENSACIG00000019671	chd3	99	92.634	ENSACLG00000009222	chd3	87	92.634	Astatotilapia_calliptera
ENSACIG00000019671	chd3	99	79.986	ENSBTAG00000014377	CHD3	80	88.372	Bos_taurus
ENSACIG00000019671	chd3	99	83.516	ENSCJAG00000014766	CHD3	81	83.516	Callithrix_jacchus
ENSACIG00000019671	chd3	99	87.861	ENSCAFG00000016859	CHD3	79	87.861	Canis_familiaris
ENSACIG00000019671	chd3	99	87.861	ENSCAFG00020007422	CHD3	87	87.861	Canis_lupus_dingo
ENSACIG00000019671	chd3	99	80.303	ENSCHIG00000016737	CHD3	82	80.303	Capra_hircus
ENSACIG00000019671	chd3	98	87.791	ENSTSYG00000035658	CHD3	86	87.791	Carlito_syrichta
ENSACIG00000019671	chd3	99	79.798	ENSCAPG00000014864	CHD3	80	79.798	Cavia_aperea
ENSACIG00000019671	chd3	99	79.803	ENSCPOG00000022653	CHD3	80	79.798	Cavia_porcellus
ENSACIG00000019671	chd3	99	83.516	ENSCCAG00000034792	CHD3	79	83.516	Cebus_capucinus
ENSACIG00000019671	chd3	99	83.516	ENSCATG00000041717	CHD3	80	83.516	Cercocebus_atys
ENSACIG00000019671	chd3	99	87.791	ENSCLAG00000010523	CHD3	82	87.791	Chinchilla_lanigera
ENSACIG00000019671	chd3	99	81.079	ENSCSAG00000011122	CHD3	83	79.228	Chlorocebus_sabaeus
ENSACIG00000019671	chd3	99	79.659	ENSCPBG00000011966	CHD3	99	79.635	Chrysemys_picta_bellii
ENSACIG00000019671	chd3	99	83.516	ENSCANG00000037641	CHD3	90	75.396	Colobus_angolensis_palliatus
ENSACIG00000019671	chd3	99	80.303	ENSCGRG00001011306	Chd3	86	75.930	Cricetulus_griseus_chok1gshd
ENSACIG00000019671	chd3	89	78.074	ENSCGRG00000007878	Chd3	78	77.419	Cricetulus_griseus_crigri
ENSACIG00000019671	chd3	99	89.139	ENSCSEG00000004489	chd3	90	87.142	Cynoglossus_semilaevis
ENSACIG00000019671	chd3	99	93.583	ENSCVAG00000007293	chd3	91	86.555	Cyprinodon_variegatus
ENSACIG00000019671	chd3	99	87.692	ENSDARG00000021405	chd3	92	80.970	Danio_rerio
ENSACIG00000019671	chd3	87	87.901	ENSDNOG00000047846	CHD3	72	87.901	Dasypus_novemcinctus
ENSACIG00000019671	chd3	99	80.846	ENSDORG00000010713	Chd3	86	76.322	Dipodomys_ordii
ENSACIG00000019671	chd3	98	87.209	ENSETEG00000017733	CHD3	81	87.209	Echinops_telfairi
ENSACIG00000019671	chd3	78	87.342	ENSEBUG00000008310	chd3	86	75.830	Eptatretus_burgeri
ENSACIG00000019671	chd3	99	80.918	ENSEASG00005019360	CHD3	86	80.273	Equus_asinus_asinus
ENSACIG00000019671	chd3	99	80.918	ENSECAG00000010051	CHD3	86	80.273	Equus_caballus
ENSACIG00000019671	chd3	93	92.784	ENSEEUG00000015205	CHD3	75	92.784	Erinaceus_europaeus
ENSACIG00000019671	chd3	100	83.045	ENSELUG00000019499	chd3	99	83.767	Esox_lucius
ENSACIG00000019671	chd3	99	81.062	ENSFCAG00000009629	CHD3	76	87.209	Felis_catus
ENSACIG00000019671	chd3	99	79.467	ENSFDAG00000008220	CHD3	83	78.556	Fukomys_damarensis
ENSACIG00000019671	chd3	99	90.323	ENSGMOG00000013599	chd3	79	90.323	Gadus_morhua
ENSACIG00000019671	chd3	68	90.292	ENSGAFG00000004055	chd3	92	89.276	Gambusia_affinis
ENSACIG00000019671	chd3	99	92.973	ENSGACG00000019275	chd3	83	92.973	Gasterosteus_aculeatus
ENSACIG00000019671	chd3	86	83.268	ENSGAGG00000013164	CHD3	99	76.454	Gopherus_agassizii
ENSACIG00000019671	chd3	99	83.516	ENSGGOG00000013496	CHD3	90	75.327	Gorilla_gorilla
ENSACIG00000019671	chd3	99	87.791	ENSHGLG00000012017	CHD3	81	79.798	Heterocephalus_glaber_female
ENSACIG00000019671	chd3	83	87.705	ENSHGLG00100013902	CHD3	79	77.936	Heterocephalus_glaber_male
ENSACIG00000019671	chd3	99	93.514	ENSHCOG00000010170	chd3	81	93.514	Hippocampus_comes
ENSACIG00000019671	chd3	100	84.548	ENSIPUG00000003271	chd3	93	84.611	Ictalurus_punctatus
ENSACIG00000019671	chd3	99	79.762	ENSSTOG00000025907	CHD3	86	76.248	Ictidomys_tridecemlineatus
ENSACIG00000019671	chd3	98	85.955	ENSJJAG00000017633	Chd3	81	85.955	Jaculus_jaculus
ENSACIG00000019671	chd3	97	97.279	ENSKMAG00000019292	chd3	87	88.320	Kryptolebias_marmoratus
ENSACIG00000019671	chd3	99	85.714	ENSLBEG00000028485	chd3	85	85.504	Labrus_bergylta
ENSACIG00000019671	chd3	98	86.339	ENSLACG00000008031	CHD3	81	86.339	Latimeria_chalumnae
ENSACIG00000019671	chd3	99	85.683	ENSLOCG00000013965	chd3	81	83.983	Lepisosteus_oculatus
ENSACIG00000019671	chd3	98	88.372	ENSLAFG00000000572	CHD3	80	88.372	Loxodonta_africana
ENSACIG00000019671	chd3	99	83.516	ENSMFAG00000020113	CHD3	87	83.516	Macaca_fascicularis
ENSACIG00000019671	chd3	99	83.516	ENSMMUG00000022221	CHD3	80	83.516	Macaca_mulatta
ENSACIG00000019671	chd3	99	83.516	ENSMNEG00000001728	CHD3	87	83.516	Macaca_nemestrina
ENSACIG00000019671	chd3	99	83.516	ENSMLEG00000032249	CHD3	80	83.516	Mandrillus_leucophaeus
ENSACIG00000019671	chd3	99	95.058	ENSMAMG00000000564	chd3	97	95.773	Mastacembelus_armatus
ENSACIG00000019671	chd3	99	79.770	ENSMAUG00000013873	Chd3	85	80.060	Mesocricetus_auratus
ENSACIG00000019671	chd3	99	87.791	ENSMICG00000008741	CHD3	79	87.791	Microcebus_murinus
ENSACIG00000019671	chd3	99	82.011	ENSMOCG00000004848	Chd3	86	75.690	Microtus_ochrogaster
ENSACIG00000019671	chd3	99	97.753	ENSMMOG00000012699	chd3	85	97.297	Mola_mola
ENSACIG00000019671	chd3	98	91.358	ENSMODG00000007509	CHD3	92	76.751	Monodelphis_domestica
ENSACIG00000019671	chd3	99	80.488	MGP_CAROLIEiJ_G0016564	Chd3	88	76.007	Mus_caroli
ENSACIG00000019671	chd3	99	79.202	ENSMUSG00000018474	Chd3	88	75.810	Mus_musculus
ENSACIG00000019671	chd3	99	87.283	MGP_PahariEiJ_G0017695	Chd3	84	87.283	Mus_pahari
ENSACIG00000019671	chd3	99	79.272	MGP_SPRETEiJ_G0017400	Chd3	88	75.810	Mus_spretus
ENSACIG00000019671	chd3	93	86.127	ENSMPUG00000008861	CHD3	86	86.127	Mustela_putorius_furo
ENSACIG00000019671	chd3	99	81.053	ENSMLUG00000014643	-	80	81.053	Myotis_lucifugus
ENSACIG00000019671	chd3	99	80.703	ENSNGAG00000000773	Chd3	79	79.842	Nannospalax_galili
ENSACIG00000019671	chd3	100	91.256	ENSNBRG00000000636	chd3	97	91.256	Neolamprologus_brichardi
ENSACIG00000019671	chd3	97	89.865	ENSNLEG00000009770	CHD3	82	84.713	Nomascus_leucogenys
ENSACIG00000019671	chd3	88	87.791	ENSMEUG00000005852	CHD3	72	87.791	Notamacropus_eugenii
ENSACIG00000019671	chd3	99	82.353	ENSOPRG00000011069	CHD3	86	82.353	Ochotona_princeps
ENSACIG00000019671	chd3	99	87.791	ENSODEG00000017785	CHD3	80	87.791	Octodon_degus
ENSACIG00000019671	chd3	99	98.919	ENSONIG00000009292	chd3	82	98.919	Oreochromis_niloticus
ENSACIG00000019671	chd3	98	78.501	ENSOCUG00000029299	CHD3	80	77.241	Oryctolagus_cuniculus
ENSACIG00000019671	chd3	90	86.468	ENSORLG00000007107	chd3	88	85.656	Oryzias_latipes
ENSACIG00000019671	chd3	64	90.258	ENSORLG00020008387	chd3	86	90.258	Oryzias_latipes_hni
ENSACIG00000019671	chd3	99	94.294	ENSOMEG00000013691	chd3	99	89.811	Oryzias_melastigma
ENSACIG00000019671	chd3	98	87.791	ENSOGAG00000003216	CHD3	81	87.791	Otolemur_garnettii
ENSACIG00000019671	chd3	99	79.205	ENSOARG00000017855	CHD3	80	79.007	Ovis_aries
ENSACIG00000019671	chd3	99	83.516	ENSPPAG00000032886	CHD3	81	83.516	Pan_paniscus
ENSACIG00000019671	chd3	99	81.062	ENSPPRG00000000626	CHD3	84	76.368	Panthera_pardus
ENSACIG00000019671	chd3	99	83.516	ENSPTRG00000008714	CHD3	90	75.534	Pan_troglodytes
ENSACIG00000019671	chd3	99	83.516	ENSPANG00000023938	CHD3	87	83.516	Papio_anubis
ENSACIG00000019671	chd3	99	92.432	ENSPKIG00000006305	chd3	84	89.118	Paramormyrops_kingsleyae
ENSACIG00000019671	chd3	68	82.126	ENSPSIG00000010177	CHD3	97	82.044	Pelodiscus_sinensis
ENSACIG00000019671	chd3	99	78.922	ENSPEMG00000014262	Chd3	83	78.641	Peromyscus_maniculatus_bairdii
ENSACIG00000019671	chd3	97	91.216	ENSPCIG00000005442	CHD3	85	91.216	Phascolarctos_cinereus
ENSACIG00000019671	chd3	99	95.676	ENSPFOG00000012464	chd3	75	95.676	Poecilia_formosa
ENSACIG00000019671	chd3	99	85.662	ENSPLAG00000002887	chd3	88	84.869	Poecilia_latipinna
ENSACIG00000019671	chd3	64	88.734	ENSPMEG00000016725	chd3	83	88.734	Poecilia_mexicana
ENSACIG00000019671	chd3	99	91.714	ENSPREG00000011044	chd3	86	92.205	Poecilia_reticulata
ENSACIG00000019671	chd3	99	77.690	ENSPPYG00000007940	CHD3	83	75.630	Pongo_abelii
ENSACIG00000019671	chd3	93	88.372	ENSPCAG00000004350	CHD3	76	88.372	Procavia_capensis
ENSACIG00000019671	chd3	98	87.791	ENSPCOG00000020952	CHD3	80	87.791	Propithecus_coquereli
ENSACIG00000019671	chd3	83	88.372	ENSPVAG00000016344	CHD3	68	88.372	Pteropus_vampyrus
ENSACIG00000019671	chd3	99	93.514	ENSPNAG00000020393	chd3	92	88.966	Pygocentrus_nattereri
ENSACIG00000019671	chd3	99	80.273	ENSRNOG00000009722	Chd3	88	79.555	Rattus_norvegicus
ENSACIG00000019671	chd3	99	83.516	ENSRBIG00000033562	CHD3	90	76.102	Rhinopithecus_bieti
ENSACIG00000019671	chd3	99	83.516	ENSRROG00000029554	CHD3	89	76.844	Rhinopithecus_roxellana
ENSACIG00000019671	chd3	99	83.516	ENSSBOG00000020719	CHD3	89	78.221	Saimiri_boliviensis_boliviensis
ENSACIG00000019671	chd3	99	76.974	ENSSHAG00000014412	CHD3	86	76.311	Sarcophilus_harrisii
ENSACIG00000019671	chd3	95	82.194	ENSSFOG00015023123	chd3	89	82.591	Scleropages_formosus
ENSACIG00000019671	chd3	98	99.405	ENSSMAG00000006451	chd3	99	90.221	Scophthalmus_maximus
ENSACIG00000019671	chd3	62	90.510	ENSSDUG00000005792	chd3	87	90.510	Seriola_dumerili
ENSACIG00000019671	chd3	99	97.838	ENSSPAG00000013694	chd3	99	94.707	Stegastes_partitus
ENSACIG00000019671	chd3	99	91.358	ENSSSCG00000021363	CHD3	92	90.854	Sus_scrofa
ENSACIG00000019671	chd3	87	91.480	ENSTRUG00000014990	chd3	83	90.397	Takifugu_rubripes
ENSACIG00000019671	chd3	99	90.909	ENSTNIG00000012998	chd3	84	93.229	Tetraodon_nigroviridis
ENSACIG00000019671	chd3	76	86.408	ENSTBEG00000011454	-	67	92.784	Tupaia_belangeri
ENSACIG00000019671	chd3	98	82.268	ENSTTRG00000010295	CHD3	79	82.438	Tursiops_truncatus
ENSACIG00000019671	chd3	99	87.861	ENSUAMG00000005475	CHD3	87	87.861	Ursus_americanus
ENSACIG00000019671	chd3	60	89.783	ENSVPAG00000010794	-	55	89.783	Vicugna_pacos
ENSACIG00000019671	chd3	99	87.861	ENSVVUG00000028011	CHD3	83	87.861	Vulpes_vulpes
ENSACIG00000019671	chd3	99	83.598	ENSXETG00000012991	chd3	78	83.598	Xenopus_tropicalis
ENSACIG00000019671	chd3	62	92.921	ENSXCOG00000000809	chd3	85	92.455	Xiphophorus_couchianus
ENSACIG00000019671	chd3	99	91.491	ENSXMAG00000016035	chd3	99	92.514	Xiphophorus_maculatus