EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000019704 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 2105 bases
Position: chrCCOE01001742.1:536236-538340
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000025431	S10_plectin	PF03501.15	2.3e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000026096	-	588	-	ENSACIP00000025431	195 (aa)	-	-

Gene Model

Click here to download ENSACIG00000019704's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000019704's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000019704	-	71	48.592	ENSACIG00000010800	rps10	77	48.592
ENSACIG00000019704	-	65	57.143	ENSACIG00000013806	-	74	57.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000019704	-	75	62.838	ENSAPOG00000016494	-	76	62.838	Acanthochromis_polyacanthus
ENSACIG00000019704	-	58	61.157	ENSAPOG00000014059	-	83	61.157	Acanthochromis_polyacanthus
ENSACIG00000019704	-	68	62.406	ENSAOCG00000007730	-	77	62.406	Amphiprion_ocellaris
ENSACIG00000019704	-	79	50.000	ENSAOCG00000011000	-	100	50.000	Amphiprion_ocellaris
ENSACIG00000019704	-	52	65.686	ENSAPEG00000019531	-	58	65.686	Amphiprion_percula
ENSACIG00000019704	-	67	60.870	ENSATEG00000004340	-	98	60.870	Anabas_testudineus
ENSACIG00000019704	-	71	79.856	ENSACLG00000001013	-	81	79.856	Astatotilapia_calliptera
ENSACIG00000019704	-	58	63.333	ENSAMXG00000037914	-	72	63.333	Astyanax_mexicanus
ENSACIG00000019704	-	82	39.623	WBGene00004479	rps-10	99	39.623	Caenorhabditis_elegans
ENSACIG00000019704	-	71	47.826	ENSCING00000006180	-	79	47.826	Ciona_intestinalis
ENSACIG00000019704	-	73	52.318	ENSCSEG00000009179	-	89	52.318	Cynoglossus_semilaevis
ENSACIG00000019704	-	69	47.445	ENSEBUG00000015221	-	86	47.445	Eptatretus_burgeri
ENSACIG00000019704	-	54	62.857	ENSECAG00000039725	-	51	62.857	Equus_caballus
ENSACIG00000019704	-	58	60.833	ENSFHEG00000008769	-	75	60.833	Fundulus_heteroclitus
ENSACIG00000019704	-	58	61.667	ENSGAFG00000001335	-	62	61.667	Gambusia_affinis
ENSACIG00000019704	-	71	80.576	ENSHBUG00000018067	-	81	80.576	Haplochromis_burtoni
ENSACIG00000019704	-	58	63.333	ENSHBUG00000023819	-	72	63.333	Haplochromis_burtoni
ENSACIG00000019704	-	65	55.147	ENSHCOG00000010612	-	60	55.147	Hippocampus_comes
ENSACIG00000019704	-	66	71.318	ENSLBEG00000020432	-	85	71.318	Labrus_bergylta
ENSACIG00000019704	-	73	49.007	ENSLACG00000010998	-	87	49.007	Latimeria_chalumnae
ENSACIG00000019704	-	71	79.856	ENSMZEG00005026198	-	81	79.856	Maylandia_zebra
ENSACIG00000019704	-	58	65.000	ENSMZEG00005007838	-	72	65.000	Maylandia_zebra
ENSACIG00000019704	-	71	54.861	ENSMMOG00000003228	-	81	54.861	Mola_mola
ENSACIG00000019704	-	84	52.047	ENSMMOG00000014380	-	90	52.047	Mola_mola
ENSACIG00000019704	-	52	73.529	ENSMALG00000015614	-	63	73.529	Monopterus_albus
ENSACIG00000019704	-	58	64.167	ENSNBRG00000008848	-	83	64.167	Neolamprologus_brichardi
ENSACIG00000019704	-	71	79.856	ENSNBRG00000016554	-	81	79.856	Neolamprologus_brichardi
ENSACIG00000019704	-	70	55.705	ENSPKIG00000013061	-	81	55.705	Paramormyrops_kingsleyae
ENSACIG00000019704	-	58	60.833	ENSPMGG00000017071	-	64	60.833	Periophthalmus_magnuspinnatus
ENSACIG00000019704	-	72	45.714	ENSPMAG00000003064	-	81	45.714	Petromyzon_marinus
ENSACIG00000019704	-	71	56.028	ENSPMAG00000010266	-	75	56.028	Petromyzon_marinus
ENSACIG00000019704	-	57	61.607	ENSPLAG00000012690	-	67	61.607	Poecilia_latipinna
ENSACIG00000019704	-	71	79.856	ENSPNYG00000006286	-	81	79.856	Pundamilia_nyererei
ENSACIG00000019704	-	58	64.167	ENSPNYG00000012665	-	72	64.167	Pundamilia_nyererei
ENSACIG00000019704	-	70	57.664	ENSPNAG00000021290	-	77	57.664	Pygocentrus_nattereri
ENSACIG00000019704	-	55	43.925	YMR230W	RPS10B	98	43.925	Saccharomyces_cerevisiae
ENSACIG00000019704	-	52	65.421	ENSSFOG00015012004	-	60	65.421	Scleropages_formosus
ENSACIG00000019704	-	70	57.823	ENSSFOG00015009603	-	74	57.823	Scleropages_formosus
ENSACIG00000019704	-	62	67.769	ENSSDUG00000011052	-	77	67.769	Seriola_dumerili
ENSACIG00000019704	-	58	60.833	ENSSDUG00000010997	-	71	60.833	Seriola_dumerili
ENSACIG00000019704	-	70	65.468	ENSSLDG00000016257	-	79	65.468	Seriola_lalandi_dorsalis
ENSACIG00000019704	-	58	60.833	ENSSLDG00000012473	-	77	60.833	Seriola_lalandi_dorsalis
ENSACIG00000019704	-	60	59.664	ENSSPAG00000015615	-	93	59.664	Stegastes_partitus
ENSACIG00000019704	-	75	56.000	ENSSPAG00000012512	-	74	56.000	Stegastes_partitus
ENSACIG00000019704	-	66	53.488	ENSSSCG00000033521	-	80	53.488	Sus_scrofa
ENSACIG00000019704	-	74	47.403	ENSXETG00000032983	-	77	48.701	Xenopus_tropicalis
ENSACIG00000019704	-	58	61.667	ENSXCOG00000016917	-	74	61.667	Xiphophorus_couchianus
ENSACIG00000019704	-	61	57.983	ENSXMAG00000029046	-	68	57.983	Xiphophorus_maculatus