EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000019728 (Gene tree)
Gene ID: -
Gene Symbol: ythdc1
Alias: zgc:101592
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 12501 bases
Position: chrCCOE01000068.1:108092-120592
Accession: ZDB-GENE-041114-114
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000025527	YTH	PF04146.15	3.4e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000026196	-	1725	-	ENSACIP00000025527	574 (aa)	-	-

Gene Model

Click here to download ENSACIG00000019728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000019728's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000019728	ythdc1	80	60.048	ENSG00000083896	YTHDC1	71	58.513	Homo_sapiens
ENSACIG00000019728	ythdc1	63	88.398	ENSAPOG00000013997	ythdc1	58	87.978	Acanthochromis_polyacanthus
ENSACIG00000019728	ythdc1	80	60.048	ENSAMEG00000005688	YTHDC1	82	54.200	Ailuropoda_melanoleuca
ENSACIG00000019728	ythdc1	92	82.396	ENSAOCG00000000239	ythdc1	81	88.732	Amphiprion_ocellaris
ENSACIG00000019728	ythdc1	62	58.993	ENSACAG00000009697	YTHDC1	72	58.034	Anolis_carolinensis
ENSACIG00000019728	ythdc1	80	60.048	ENSANAG00000001522	YTHDC1	71	58.513	Aotus_nancymaae
ENSACIG00000019728	ythdc1	91	84.848	ENSACLG00000019371	ythdc1	81	95.070	Astatotilapia_calliptera
ENSACIG00000019728	ythdc1	80	59.330	ENSBTAG00000015572	YTHDC1	71	58.273	Bos_taurus
ENSACIG00000019728	ythdc1	80	60.048	ENSCJAG00000009934	YTHDC1	71	58.513	Callithrix_jacchus
ENSACIG00000019728	ythdc1	80	60.048	ENSCAFG00000002821	YTHDC1	82	54.200	Canis_familiaris
ENSACIG00000019728	ythdc1	80	60.048	ENSCAFG00020027112	YTHDC1	82	54.200	Canis_lupus_dingo
ENSACIG00000019728	ythdc1	78	52.513	ENSCHIG00000004810	YTHDC1	63	69.531	Capra_hircus
ENSACIG00000019728	ythdc1	80	60.048	ENSTSYG00000011668	YTHDC1	71	58.513	Carlito_syrichta
ENSACIG00000019728	ythdc1	62	40.153	ENSCAPG00000008722	YTHDC1	63	45.556	Cavia_aperea
ENSACIG00000019728	ythdc1	80	60.048	ENSCCAG00000035754	YTHDC1	71	58.513	Cebus_capucinus
ENSACIG00000019728	ythdc1	80	59.649	ENSCATG00000036320	YTHDC1	64	69.531	Cercocebus_atys
ENSACIG00000019728	ythdc1	78	59.398	ENSCLAG00000005482	YTHDC1	70	58.353	Chinchilla_lanigera
ENSACIG00000019728	ythdc1	80	60.048	ENSCSAG00000005252	YTHDC1	71	58.513	Chlorocebus_sabaeus
ENSACIG00000019728	ythdc1	79	58.559	ENSCPBG00000021965	YTHDC1	63	59.446	Chrysemys_picta_bellii
ENSACIG00000019728	ythdc1	80	60.048	ENSCANG00000004769	YTHDC1	64	69.531	Colobus_angolensis_palliatus
ENSACIG00000019728	ythdc1	80	59.398	ENSCGRG00001000816	Ythdc1	71	57.412	Cricetulus_griseus_chok1gshd
ENSACIG00000019728	ythdc1	78	59.809	ENSCGRG00000009807	Ythdc1	70	58.273	Cricetulus_griseus_crigri
ENSACIG00000019728	ythdc1	63	76.471	ENSCVAG00000022349	ythdc1	60	76.399	Cyprinodon_variegatus
ENSACIG00000019728	ythdc1	93	57.233	ENSDARG00000051953	ythdc1	58	65.347	Danio_rerio
ENSACIG00000019728	ythdc1	82	58.782	ENSDNOG00000004949	YTHDC1	71	58.034	Dasypus_novemcinctus
ENSACIG00000019728	ythdc1	78	60.048	ENSDORG00000013045	Ythdc1	70	57.794	Dipodomys_ordii
ENSACIG00000019728	ythdc1	67	65.385	ENSETEG00000001878	YTHDC1	52	82.000	Echinops_telfairi
ENSACIG00000019728	ythdc1	80	60.048	ENSEASG00005018383	YTHDC1	82	54.200	Equus_asinus_asinus
ENSACIG00000019728	ythdc1	80	60.048	ENSECAG00000018303	YTHDC1	65	70.312	Equus_caballus
ENSACIG00000019728	ythdc1	83	59.286	ENSEEUG00000015466	YTHDC1	71	57.554	Erinaceus_europaeus
ENSACIG00000019728	ythdc1	89	62.151	ENSELUG00000014029	ythdc1	73	62.774	Esox_lucius
ENSACIG00000019728	ythdc1	80	60.048	ENSFCAG00000026791	YTHDC1	71	58.753	Felis_catus
ENSACIG00000019728	ythdc1	78	63.333	ENSFALG00000006581	YTHDC1	83	64.756	Ficedula_albicollis
ENSACIG00000019728	ythdc1	78	60.048	ENSFDAG00000018560	YTHDC1	65	67.925	Fukomys_damarensis
ENSACIG00000019728	ythdc1	94	62.081	ENSFHEG00000001286	ythdc1	91	62.134	Fundulus_heteroclitus
ENSACIG00000019728	ythdc1	54	82.819	ENSGMOG00000018815	ythdc1	82	69.620	Gadus_morhua
ENSACIG00000019728	ythdc1	72	81.206	ENSGAFG00000001759	ythdc1	91	79.572	Gambusia_affinis
ENSACIG00000019728	ythdc1	87	81.944	ENSGACG00000015486	ythdc1	79	82.192	Gasterosteus_aculeatus
ENSACIG00000019728	ythdc1	80	59.649	ENSGGOG00000021958	YTHDC1	64	69.531	Gorilla_gorilla
ENSACIG00000019728	ythdc1	92	83.698	ENSHBUG00000019288	ythdc1	81	95.070	Haplochromis_burtoni
ENSACIG00000019728	ythdc1	80	59.649	ENSHGLG00000006319	-	71	57.647	Heterocephalus_glaber_female
ENSACIG00000019728	ythdc1	80	58.768	ENSHGLG00100001556	-	71	57.250	Heterocephalus_glaber_male
ENSACIG00000019728	ythdc1	74	70.833	ENSHCOG00000001520	ythdc1	90	71.637	Hippocampus_comes
ENSACIG00000019728	ythdc1	93	55.975	ENSIPUG00000018136	ythdc1	76	60.465	Ictalurus_punctatus
ENSACIG00000019728	ythdc1	80	59.155	ENSSTOG00000013652	YTHDC1	71	57.647	Ictidomys_tridecemlineatus
ENSACIG00000019728	ythdc1	62	59.390	ENSJJAG00000010268	Ythdc1	71	57.412	Jaculus_jaculus
ENSACIG00000019728	ythdc1	62	100.000	ENSKMAG00000006483	ythdc1	87	79.036	Kryptolebias_marmoratus
ENSACIG00000019728	ythdc1	62	71.608	ENSLBEG00000020831	ythdc1	66	72.886	Labrus_bergylta
ENSACIG00000019728	ythdc1	62	60.142	ENSLACG00000004893	YTHDC1	66	57.987	Latimeria_chalumnae
ENSACIG00000019728	ythdc1	93	55.556	ENSLOCG00000003045	ythdc1	92	53.958	Lepisosteus_oculatus
ENSACIG00000019728	ythdc1	80	59.579	ENSLAFG00000021592	YTHDC1	82	54.200	Loxodonta_africana
ENSACIG00000019728	ythdc1	80	59.649	ENSMFAG00000031927	YTHDC1	64	69.531	Macaca_fascicularis
ENSACIG00000019728	ythdc1	80	60.048	ENSMMUG00000002265	YTHDC1	62	70.638	Macaca_mulatta
ENSACIG00000019728	ythdc1	80	60.048	ENSMNEG00000033751	YTHDC1	64	69.531	Macaca_nemestrina
ENSACIG00000019728	ythdc1	80	60.048	ENSMLEG00000042147	YTHDC1	64	69.531	Mandrillus_leucophaeus
ENSACIG00000019728	ythdc1	90	81.683	ENSMAMG00000013122	ythdc1	80	80.387	Mastacembelus_armatus
ENSACIG00000019728	ythdc1	91	84.848	ENSMZEG00005023173	ythdc1	81	95.070	Maylandia_zebra
ENSACIG00000019728	ythdc1	80	59.398	ENSMAUG00000001286	Ythdc1	71	57.412	Mesocricetus_auratus
ENSACIG00000019728	ythdc1	63	59.813	ENSMICG00000034640	YTHDC1	71	59.091	Microcebus_murinus
ENSACIG00000019728	ythdc1	80	58.920	ENSMOCG00000020201	Ythdc1	71	57.412	Microtus_ochrogaster
ENSACIG00000019728	ythdc1	93	69.231	ENSMMOG00000021200	ythdc1	93	71.358	Mola_mola
ENSACIG00000019728	ythdc1	99	41.224	ENSMODG00000014337	-	57	52.312	Monodelphis_domestica
ENSACIG00000019728	ythdc1	94	36.657	ENSMODG00000010076	-	69	49.713	Monodelphis_domestica
ENSACIG00000019728	ythdc1	68	44.201	ENSMODG00000009173	-	74	49.425	Monodelphis_domestica
ENSACIG00000019728	ythdc1	50	48.457	ENSMODG00000004117	-	93	49.682	Monodelphis_domestica
ENSACIG00000019728	ythdc1	58	89.086	ENSMALG00000013412	ythdc1	57	88.856	Monopterus_albus
ENSACIG00000019728	ythdc1	80	59.809	MGP_CAROLIEiJ_G0027347	Ythdc1	64	70.213	Mus_caroli
ENSACIG00000019728	ythdc1	82	59.112	ENSMUSG00000035851	Ythdc1	64	70.213	Mus_musculus
ENSACIG00000019728	ythdc1	82	59.112	MGP_PahariEiJ_G0017126	Ythdc1	64	70.213	Mus_pahari
ENSACIG00000019728	ythdc1	82	59.112	MGP_SPRETEiJ_G0028339	Ythdc1	64	70.213	Mus_spretus
ENSACIG00000019728	ythdc1	78	61.538	ENSMPUG00000001743	YTHDC1	60	64.183	Mustela_putorius_furo
ENSACIG00000019728	ythdc1	78	59.809	ENSMLUG00000016300	YTHDC1	71	57.794	Myotis_lucifugus
ENSACIG00000019728	ythdc1	84	79.661	ENSNBRG00000007663	ythdc1	92	80.075	Neolamprologus_brichardi
ENSACIG00000019728	ythdc1	78	58.216	ENSNLEG00000009202	YTHDC1	64	67.969	Nomascus_leucogenys
ENSACIG00000019728	ythdc1	63	60.596	ENSOPRG00000008986	YTHDC1	54	60.535	Ochotona_princeps
ENSACIG00000019728	ythdc1	80	59.712	ENSODEG00000001715	YTHDC1	71	58.513	Octodon_degus
ENSACIG00000019728	ythdc1	93	97.727	ENSONIG00000012651	ythdc1	90	97.778	Oreochromis_niloticus
ENSACIG00000019728	ythdc1	93	62.368	ENSOCUG00000015886	YTHDC1	73	64.470	Oryctolagus_cuniculus
ENSACIG00000019728	ythdc1	91	77.206	ENSORLG00000030544	ythdc1	82	76.528	Oryzias_latipes
ENSACIG00000019728	ythdc1	91	77.372	ENSORLG00020019316	ythdc1	82	76.528	Oryzias_latipes_hni
ENSACIG00000019728	ythdc1	90	76.601	ENSOMEG00000000551	ythdc1	82	76.413	Oryzias_melastigma
ENSACIG00000019728	ythdc1	80	60.526	ENSOGAG00000003362	YTHDC1	71	58.273	Otolemur_garnettii
ENSACIG00000019728	ythdc1	80	59.330	ENSOARG00000008633	YTHDC1	71	58.273	Ovis_aries
ENSACIG00000019728	ythdc1	80	59.649	ENSPPAG00000041315	YTHDC1	64	69.531	Pan_paniscus
ENSACIG00000019728	ythdc1	80	59.649	ENSPPRG00000011979	YTHDC1	82	53.649	Panthera_pardus
ENSACIG00000019728	ythdc1	78	59.148	ENSPTIG00000015527	YTHDC1	82	53.254	Panthera_tigris_altaica
ENSACIG00000019728	ythdc1	80	59.649	ENSPTRG00000016105	YTHDC1	64	69.531	Pan_troglodytes
ENSACIG00000019728	ythdc1	80	59.649	ENSPANG00000021590	YTHDC1	64	69.531	Papio_anubis
ENSACIG00000019728	ythdc1	81	62.972	ENSPKIG00000018497	ythdc1	74	63.793	Paramormyrops_kingsleyae
ENSACIG00000019728	ythdc1	68	75.380	ENSPMGG00000000970	-	78	74.164	Periophthalmus_magnuspinnatus
ENSACIG00000019728	ythdc1	78	59.809	ENSPEMG00000013850	Ythdc1	70	58.333	Peromyscus_maniculatus_bairdii
ENSACIG00000019728	ythdc1	62	76.413	ENSPFOG00000013404	ythdc1	94	65.971	Poecilia_formosa
ENSACIG00000019728	ythdc1	62	76.413	ENSPLAG00000011079	ythdc1	87	76.829	Poecilia_latipinna
ENSACIG00000019728	ythdc1	62	76.413	ENSPMEG00000009238	ythdc1	62	76.829	Poecilia_mexicana
ENSACIG00000019728	ythdc1	62	82.873	ENSPREG00000016973	ythdc1	60	77.573	Poecilia_reticulata
ENSACIG00000019728	ythdc1	62	60.048	ENSPPYG00000014726	YTHDC1	65	58.513	Pongo_abelii
ENSACIG00000019728	ythdc1	82	54.250	ENSPCOG00000019105	YTHDC1	70	53.367	Propithecus_coquereli
ENSACIG00000019728	ythdc1	80	56.699	ENSPVAG00000015551	YTHDC1	70	55.396	Pteropus_vampyrus
ENSACIG00000019728	ythdc1	91	84.848	ENSPNYG00000011687	ythdc1	81	95.070	Pundamilia_nyererei
ENSACIG00000019728	ythdc1	80	58.920	ENSRNOG00000001996	Ythdc1	71	57.882	Rattus_norvegicus
ENSACIG00000019728	ythdc1	78	59.434	ENSRBIG00000028279	YTHDC1	78	62.614	Rhinopithecus_bieti
ENSACIG00000019728	ythdc1	80	60.048	ENSRROG00000035028	YTHDC1	64	69.531	Rhinopithecus_roxellana
ENSACIG00000019728	ythdc1	80	59.649	ENSSBOG00000022353	YTHDC1	64	69.531	Saimiri_boliviensis_boliviensis
ENSACIG00000019728	ythdc1	62	59.809	ENSSHAG00000002538	YTHDC1	65	58.753	Sarcophilus_harrisii
ENSACIG00000019728	ythdc1	61	79.602	ENSSMAG00000009086	ythdc1	61	79.805	Scophthalmus_maximus
ENSACIG00000019728	ythdc1	90	82.382	ENSSDUG00000022008	ythdc1	81	86.897	Seriola_dumerili
ENSACIG00000019728	ythdc1	90	82.382	ENSSLDG00000007926	ythdc1	81	87.586	Seriola_lalandi_dorsalis
ENSACIG00000019728	ythdc1	62	59.569	ENSSARG00000010960	YTHDC1	72	58.273	Sorex_araneus
ENSACIG00000019728	ythdc1	62	59.148	ENSSPUG00000009357	YTHDC1	72	58.794	Sphenodon_punctatus
ENSACIG00000019728	ythdc1	92	81.663	ENSSPAG00000011449	ythdc1	81	91.667	Stegastes_partitus
ENSACIG00000019728	ythdc1	80	59.390	ENSSSCG00000035505	YTHDC1	82	53.529	Sus_scrofa
ENSACIG00000019728	ythdc1	65	72.792	ENSTRUG00000010142	ythdc1	64	72.482	Takifugu_rubripes
ENSACIG00000019728	ythdc1	96	74.703	ENSTNIG00000013243	ythdc1	91	73.730	Tetraodon_nigroviridis
ENSACIG00000019728	ythdc1	81	59.856	ENSTBEG00000011546	YTHDC1	64	64.183	Tupaia_belangeri
ENSACIG00000019728	ythdc1	80	59.091	ENSTTRG00000005083	YTHDC1	70	57.794	Tursiops_truncatus
ENSACIG00000019728	ythdc1	62	60.048	ENSUAMG00000010388	YTHDC1	73	54.309	Ursus_americanus
ENSACIG00000019728	ythdc1	62	52.392	ENSUMAG00000013668	YTHDC1	75	50.118	Ursus_maritimus
ENSACIG00000019728	ythdc1	80	59.148	ENSVPAG00000009040	YTHDC1	70	58.333	Vicugna_pacos
ENSACIG00000019728	ythdc1	78	59.155	ENSVVUG00000005387	YTHDC1	80	53.543	Vulpes_vulpes
ENSACIG00000019728	ythdc1	93	50.000	ENSXETG00000017960	ythdc1	71	64.524	Xenopus_tropicalis
ENSACIG00000019728	ythdc1	72	63.270	ENSXCOG00000000530	ythdc1	86	60.050	Xiphophorus_couchianus
ENSACIG00000019728	ythdc1	62	76.658	ENSXMAG00000005196	ythdc1	82	79.433	Xiphophorus_maculatus