EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000019772 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 792 bases
Position: chrCCOE01000606.1:587459-588250
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000025521	SMN	PF06003.12	6.1e-98	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000026190	-	792	-	ENSACIP00000025521	263 (aa)	-	-

Gene Model

Click here to download ENSACIG00000019772's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000019772's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000019772	-	64	89.941	ENSACIG00000007598	smn1	94	90.533

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000019772	-	97	50.000	ENSG00000205571	SMN2	91	51.685	Homo_sapiens
ENSACIG00000019772	-	97	50.000	ENSG00000172062	SMN1	91	49.265	Homo_sapiens
ENSACIG00000019772	-	99	77.947	ENSAPOG00000011324	smn1	93	77.947	Acanthochromis_polyacanthus
ENSACIG00000019772	-	97	50.189	ENSAMEG00000003316	-	85	51.698	Ailuropoda_melanoleuca
ENSACIG00000019772	-	99	78.327	ENSAOCG00000024444	smn1	93	78.327	Amphiprion_ocellaris
ENSACIG00000019772	-	99	78.707	ENSAPEG00000016504	smn1	93	78.707	Amphiprion_percula
ENSACIG00000019772	-	99	79.545	ENSATEG00000002182	smn1	80	79.545	Anabas_testudineus
ENSACIG00000019772	-	70	46.809	ENSAPLG00000010912	-	90	46.277	Anas_platyrhynchos
ENSACIG00000019772	-	97	47.909	ENSACAG00000010017	-	89	47.348	Anolis_carolinensis
ENSACIG00000019772	-	97	48.699	ENSANAG00000032133	-	88	46.792	Aotus_nancymaae
ENSACIG00000019772	-	99	84.733	ENSACLG00000007308	smn1	90	84.733	Astatotilapia_calliptera
ENSACIG00000019772	-	99	57.034	ENSAMXG00000013884	smn1	93	63.258	Astyanax_mexicanus
ENSACIG00000019772	-	97	49.807	ENSBTAG00000005743	SMN2	89	48.708	Bos_taurus
ENSACIG00000019772	-	97	50.385	ENSCJAG00000016290	-	88	46.970	Callithrix_jacchus
ENSACIG00000019772	-	97	50.385	ENSCAFG00000007812	SMN	89	50.566	Canis_familiaris
ENSACIG00000019772	-	97	50.385	ENSCAFG00020019229	-	83	50.566	Canis_lupus_dingo
ENSACIG00000019772	-	97	49.042	ENSCHIG00000015559	-	87	48.315	Capra_hircus
ENSACIG00000019772	-	97	51.145	ENSTSYG00000012058	-	89	50.373	Carlito_syrichta
ENSACIG00000019772	-	82	42.986	ENSCAPG00000011021	-	87	42.500	Cavia_aperea
ENSACIG00000019772	-	97	49.615	ENSCPOG00000036973	-	88	49.254	Cavia_porcellus
ENSACIG00000019772	-	97	49.057	ENSCPOG00000012328	-	89	48.148	Cavia_porcellus
ENSACIG00000019772	-	97	48.462	ENSCCAG00000018127	-	88	46.970	Cebus_capucinus
ENSACIG00000019772	-	97	50.385	ENSCATG00000037002	-	91	52.434	Cercocebus_atys
ENSACIG00000019772	-	97	48.679	ENSCLAG00000000284	-	88	50.373	Chinchilla_lanigera
ENSACIG00000019772	-	97	50.769	ENSCSAG00000015688	-	88	51.685	Chlorocebus_sabaeus
ENSACIG00000019772	-	54	59.589	ENSCHOG00000007346	-	67	53.846	Choloepus_hoffmanni
ENSACIG00000019772	-	98	45.956	ENSCPBG00000010968	-	92	46.275	Chrysemys_picta_bellii
ENSACIG00000019772	-	97	51.154	ENSCANG00000038242	-	93	52.075	Colobus_angolensis_palliatus
ENSACIG00000019772	-	97	48.077	ENSCANG00000033324	-	88	48.339	Colobus_angolensis_palliatus
ENSACIG00000019772	-	97	51.163	ENSCGRG00001017959	-	89	51.163	Cricetulus_griseus_chok1gshd
ENSACIG00000019772	-	97	38.462	ENSCGRG00001016998	-	87	39.768	Cricetulus_griseus_chok1gshd
ENSACIG00000019772	-	97	51.163	ENSCGRG00000007698	Smn1	89	51.163	Cricetulus_griseus_crigri
ENSACIG00000019772	-	99	61.905	ENSCSEG00000015227	smn1	95	61.905	Cynoglossus_semilaevis
ENSACIG00000019772	-	99	74.717	ENSCVAG00000007498	smn1	93	74.621	Cyprinodon_variegatus
ENSACIG00000019772	-	99	59.140	ENSDARG00000018494	smn1	93	63.433	Danio_rerio
ENSACIG00000019772	-	84	45.217	ENSDNOG00000007283	-	93	44.828	Dasypus_novemcinctus
ENSACIG00000019772	-	53	55.556	ENSDNOG00000045949	-	63	55.556	Dasypus_novemcinctus
ENSACIG00000019772	-	97	43.243	ENSDORG00000007082	Smn1	89	41.985	Dipodomys_ordii
ENSACIG00000019772	-	58	46.795	ENSETEG00000001406	-	82	44.134	Echinops_telfairi
ENSACIG00000019772	-	50	45.139	ENSEBUG00000011902	smn1	93	35.192	Eptatretus_burgeri
ENSACIG00000019772	-	94	43.651	ENSEASG00005018000	-	88	44.531	Equus_asinus_asinus
ENSACIG00000019772	-	97	48.077	ENSECAG00000015215	-	89	49.057	Equus_caballus
ENSACIG00000019772	-	94	47.692	ENSEEUG00000015777	-	99	44.531	Erinaceus_europaeus
ENSACIG00000019772	-	99	64.504	ENSELUG00000018067	smn1	93	64.504	Esox_lucius
ENSACIG00000019772	-	97	50.192	ENSFCAG00000028292	SMN	89	51.128	Felis_catus
ENSACIG00000019772	-	94	53.333	ENSFALG00000012320	-	87	50.196	Ficedula_albicollis
ENSACIG00000019772	-	97	46.442	ENSFDAG00000017683	-	88	44.280	Fukomys_damarensis
ENSACIG00000019772	-	97	74.609	ENSFHEG00000018508	smn1	93	74.609	Fundulus_heteroclitus
ENSACIG00000019772	-	99	63.118	ENSGMOG00000017279	smn1	91	63.118	Gadus_morhua
ENSACIG00000019772	-	97	48.496	ENSGALG00000002430	SMN	91	50.382	Gallus_gallus
ENSACIG00000019772	-	99	76.426	ENSGAFG00000009501	smn1	93	76.426	Gambusia_affinis
ENSACIG00000019772	-	99	74.427	ENSGACG00000010584	smn1	90	72.901	Gasterosteus_aculeatus
ENSACIG00000019772	-	98	49.434	ENSGAGG00000011374	-	91	48.315	Gopherus_agassizii
ENSACIG00000019772	-	99	33.023	ENSGAGG00000013639	-	92	32.836	Gopherus_agassizii
ENSACIG00000019772	-	60	58.025	ENSGGOG00000026704	-	76	58.025	Gorilla_gorilla
ENSACIG00000019772	-	97	47.692	ENSGGOG00000003872	-	92	46.360	Gorilla_gorilla
ENSACIG00000019772	-	99	85.115	ENSHBUG00000013987	smn1	93	85.115	Haplochromis_burtoni
ENSACIG00000019772	-	97	45.420	ENSHGLG00000001905	-	90	45.818	Heterocephalus_glaber_female
ENSACIG00000019772	-	97	47.148	ENSHGLG00000001018	-	88	47.566	Heterocephalus_glaber_female
ENSACIG00000019772	-	97	47.148	ENSHGLG00100011252	-	88	47.566	Heterocephalus_glaber_male
ENSACIG00000019772	-	97	45.420	ENSHGLG00100018676	-	94	45.818	Heterocephalus_glaber_male
ENSACIG00000019772	-	99	69.962	ENSHCOG00000017136	smn1	88	69.582	Hippocampus_comes
ENSACIG00000019772	-	99	60.902	ENSIPUG00000012580	smn1	83	61.509	Ictalurus_punctatus
ENSACIG00000019772	-	97	50.000	ENSSTOG00000012288	-	93	51.527	Ictidomys_tridecemlineatus
ENSACIG00000019772	-	54	46.897	ENSJJAG00000014853	-	85	45.029	Jaculus_jaculus
ENSACIG00000019772	-	99	73.585	ENSKMAG00000007239	smn1	93	74.717	Kryptolebias_marmoratus
ENSACIG00000019772	-	99	77.652	ENSLBEG00000022550	smn1	93	77.652	Labrus_bergylta
ENSACIG00000019772	-	99	33.571	ENSLACG00000009808	-	88	32.014	Latimeria_chalumnae
ENSACIG00000019772	-	99	51.264	ENSLOCG00000011339	smn1	93	55.805	Lepisosteus_oculatus
ENSACIG00000019772	-	97	47.925	ENSLAFG00000003425	-	99	36.782	Loxodonta_africana
ENSACIG00000019772	-	97	51.154	ENSMFAG00000031523	SMN1	91	52.060	Macaca_fascicularis
ENSACIG00000019772	-	97	47.308	ENSMFAG00000008812	-	88	46.691	Macaca_fascicularis
ENSACIG00000019772	-	97	51.154	ENSMMUG00000020214	SMN1	91	52.060	Macaca_mulatta
ENSACIG00000019772	-	97	46.538	ENSMMUG00000030594	-	88	44.604	Macaca_mulatta
ENSACIG00000019772	-	78	38.095	ENSMNEG00000036423	-	66	41.111	Macaca_nemestrina
ENSACIG00000019772	-	97	51.154	ENSMNEG00000035094	-	91	52.060	Macaca_nemestrina
ENSACIG00000019772	-	97	51.154	ENSMLEG00000041902	-	92	52.434	Mandrillus_leucophaeus
ENSACIG00000019772	-	99	79.167	ENSMAMG00000011034	smn1	93	79.167	Mastacembelus_armatus
ENSACIG00000019772	-	99	85.496	ENSMZEG00005013634	smn1	93	85.496	Maylandia_zebra
ENSACIG00000019772	-	70	49.189	ENSMGAG00000008889	-	88	48.936	Meleagris_gallopavo
ENSACIG00000019772	-	97	50.189	ENSMAUG00000010262	Smn1	89	51.550	Mesocricetus_auratus
ENSACIG00000019772	-	59	57.595	ENSMICG00000034708	-	71	57.595	Microcebus_murinus
ENSACIG00000019772	-	97	50.379	ENSMOCG00000017833	Smn1	89	50.000	Microtus_ochrogaster
ENSACIG00000019772	-	99	70.301	ENSMMOG00000005504	smn1	94	69.030	Mola_mola
ENSACIG00000019772	-	97	51.527	ENSMODG00000001436	-	88	51.341	Monodelphis_domestica
ENSACIG00000019772	-	99	78.409	ENSMALG00000008025	smn1	93	78.409	Monopterus_albus
ENSACIG00000019772	-	97	50.000	MGP_CAROLIEiJ_G0018836	Smn1	89	51.938	Mus_caroli
ENSACIG00000019772	-	97	49.624	ENSMUSG00000021645	Smn1	89	51.550	Mus_musculus
ENSACIG00000019772	-	97	51.938	MGP_PahariEiJ_G0015911	Smn1	89	51.163	Mus_pahari
ENSACIG00000019772	-	97	50.752	MGP_SPRETEiJ_G0019718	Smn1	89	51.163	Mus_spretus
ENSACIG00000019772	-	97	50.000	ENSMPUG00000014470	-	91	52.075	Mustela_putorius_furo
ENSACIG00000019772	-	97	48.302	ENSMLUG00000010603	-	85	49.057	Myotis_lucifugus
ENSACIG00000019772	-	97	49.248	ENSNGAG00000019833	Smn1	89	50.000	Nannospalax_galili
ENSACIG00000019772	-	99	86.641	ENSNBRG00000023000	smn1	93	86.641	Neolamprologus_brichardi
ENSACIG00000019772	-	97	50.385	ENSNLEG00000004454	-	91	52.060	Nomascus_leucogenys
ENSACIG00000019772	-	71	46.500	ENSMEUG00000011393	-	87	46.766	Notamacropus_eugenii
ENSACIG00000019772	-	94	48.606	ENSOPRG00000002015	-	99	49.225	Ochotona_princeps
ENSACIG00000019772	-	97	49.425	ENSODEG00000015976	-	91	49.814	Octodon_degus
ENSACIG00000019772	-	99	86.260	ENSONIG00000011799	smn1	93	86.260	Oreochromis_niloticus
ENSACIG00000019772	-	97	45.556	ENSOANG00000001626	-	91	46.183	Ornithorhynchus_anatinus
ENSACIG00000019772	-	97	49.615	ENSOCUG00000017097	-	88	46.442	Oryctolagus_cuniculus
ENSACIG00000019772	-	97	39.925	ENSOCUG00000025183	-	88	41.852	Oryctolagus_cuniculus
ENSACIG00000019772	-	97	50.189	ENSOCUG00000026649	-	88	45.255	Oryctolagus_cuniculus
ENSACIG00000019772	-	99	74.144	ENSORLG00000010552	smn1	93	74.144	Oryzias_latipes
ENSACIG00000019772	-	99	67.803	ENSORLG00020007936	smn1	92	67.424	Oryzias_latipes_hni
ENSACIG00000019772	-	99	73.764	ENSORLG00015022425	smn1	93	73.764	Oryzias_latipes_hsok
ENSACIG00000019772	-	99	73.764	ENSOMEG00000007824	smn1	93	73.764	Oryzias_melastigma
ENSACIG00000019772	-	97	43.223	ENSOGAG00000031414	-	91	45.196	Otolemur_garnettii
ENSACIG00000019772	-	97	48.263	ENSOARG00000005425	-	94	47.547	Ovis_aries
ENSACIG00000019772	-	97	50.000	ENSPPAG00000036640	-	91	51.685	Pan_paniscus
ENSACIG00000019772	-	97	50.192	ENSPPRG00000005575	-	89	51.128	Panthera_pardus
ENSACIG00000019772	-	97	49.808	ENSPTIG00000007745	-	89	50.936	Panthera_tigris_altaica
ENSACIG00000019772	-	97	49.430	ENSPTRG00000016955	-	92	51.111	Pan_troglodytes
ENSACIG00000019772	-	97	47.510	ENSPANG00000000253	-	87	47.059	Papio_anubis
ENSACIG00000019772	-	97	51.154	ENSPANG00000013601	-	88	52.060	Papio_anubis
ENSACIG00000019772	-	99	55.805	ENSPKIG00000011096	smn1	93	56.061	Paramormyrops_kingsleyae
ENSACIG00000019772	-	94	46.538	ENSPSIG00000014787	-	79	45.769	Pelodiscus_sinensis
ENSACIG00000019772	-	99	70.943	ENSPMGG00000012285	smn1	96	70.943	Periophthalmus_magnuspinnatus
ENSACIG00000019772	-	95	35.115	ENSPMAG00000005004	smn1	87	34.944	Petromyzon_marinus
ENSACIG00000019772	-	97	51.724	ENSPCIG00000025764	-	89	51.724	Phascolarctos_cinereus
ENSACIG00000019772	-	99	76.426	ENSPFOG00000007786	smn1	93	76.426	Poecilia_formosa
ENSACIG00000019772	-	99	76.806	ENSPLAG00000012071	smn1	93	76.806	Poecilia_latipinna
ENSACIG00000019772	-	99	76.426	ENSPMEG00000017085	smn1	93	76.426	Poecilia_mexicana
ENSACIG00000019772	-	99	76.426	ENSPREG00000005824	smn1	93	76.426	Poecilia_reticulata
ENSACIG00000019772	-	94	48.617	ENSPPYG00000015533	-	91	50.385	Pongo_abelii
ENSACIG00000019772	-	54	46.897	ENSPPYG00000019189	-	99	37.200	Pongo_abelii
ENSACIG00000019772	-	94	47.244	ENSPCAG00000004187	-	94	47.710	Procavia_capensis
ENSACIG00000019772	-	67	50.829	ENSPCOG00000022307	-	65	56.250	Propithecus_coquereli
ENSACIG00000019772	-	97	50.192	ENSPVAG00000005977	-	88	50.000	Pteropus_vampyrus
ENSACIG00000019772	-	99	86.641	ENSPNYG00000014148	smn1	93	86.641	Pundamilia_nyererei
ENSACIG00000019772	-	99	60.985	ENSPNAG00000014007	smn1	81	64.015	Pygocentrus_nattereri
ENSACIG00000019772	-	97	50.566	ENSRNOG00000018067	Smn1	89	50.775	Rattus_norvegicus
ENSACIG00000019772	-	97	48.649	ENSRBIG00000036775	-	87	46.743	Rhinopithecus_bieti
ENSACIG00000019772	-	97	50.769	ENSRBIG00000037052	-	88	51.685	Rhinopithecus_bieti
ENSACIG00000019772	-	97	50.769	ENSRROG00000039399	-	91	51.685	Rhinopithecus_roxellana
ENSACIG00000019772	-	97	48.249	ENSRROG00000031088	-	90	45.385	Rhinopithecus_roxellana
ENSACIG00000019772	-	57	55.844	ENSSBOG00000020112	-	54	55.844	Saimiri_boliviensis_boliviensis
ENSACIG00000019772	-	97	50.385	ENSSBOG00000011665	-	88	50.000	Saimiri_boliviensis_boliviensis
ENSACIG00000019772	-	97	51.724	ENSSHAG00000001499	-	94	49.425	Sarcophilus_harrisii
ENSACIG00000019772	-	99	58.555	ENSSFOG00015015507	smn1	93	58.555	Scleropages_formosus
ENSACIG00000019772	-	99	74.809	ENSSMAG00000007922	smn1	93	74.809	Scophthalmus_maximus
ENSACIG00000019772	-	99	81.818	ENSSDUG00000018533	smn1	93	81.818	Seriola_dumerili
ENSACIG00000019772	-	99	82.197	ENSSLDG00000021135	smn1	93	82.197	Seriola_lalandi_dorsalis
ENSACIG00000019772	-	99	50.000	ENSSPUG00000000373	-	92	47.015	Sphenodon_punctatus
ENSACIG00000019772	-	99	78.707	ENSSPAG00000004345	smn1	93	78.707	Stegastes_partitus
ENSACIG00000019772	-	97	48.473	ENSSSCG00000016970	-	88	51.504	Sus_scrofa
ENSACIG00000019772	-	97	48.905	ENSTGUG00000001548	-	94	43.911	Taeniopygia_guttata
ENSACIG00000019772	-	99	65.779	ENSTRUG00000000736	smn	93	68.061	Takifugu_rubripes
ENSACIG00000019772	-	99	63.333	ENSTNIG00000009892	smn1	93	65.799	Tetraodon_nigroviridis
ENSACIG00000019772	-	58	59.236	ENSTBEG00000002399	-	86	54.749	Tupaia_belangeri
ENSACIG00000019772	-	58	59.615	ENSTTRG00000005080	-	87	48.889	Tursiops_truncatus
ENSACIG00000019772	-	58	60.897	ENSUAMG00000024947	-	57	60.897	Ursus_americanus
ENSACIG00000019772	-	97	51.321	ENSUMAG00000007842	-	66	52.453	Ursus_maritimus
ENSACIG00000019772	-	97	47.674	ENSVPAG00000009887	-	92	47.529	Vicugna_pacos
ENSACIG00000019772	-	97	50.385	ENSVVUG00000006934	-	89	50.566	Vulpes_vulpes
ENSACIG00000019772	-	93	33.077	ENSXETG00000004912	-	79	57.627	Xenopus_tropicalis
ENSACIG00000019772	-	97	48.339	ENSXETG00000018189	smn2	88	47.212	Xenopus_tropicalis
ENSACIG00000019772	-	99	75.665	ENSXMAG00000001521	smn1	93	75.665	Xiphophorus_maculatus