EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000019922 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-212k18.5
Alias: fb25b09|wu:fb25b09
Full Name: si:ch211-212k18.5
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 5222 bases
Position: chrCCOE01000491.1:844927-850148
Accession: ZDB-GENE-030131-379
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000025706	zf-C2H2	PF00096.26	9.5e-14	1	1
ENSACIP00000025706	zf-met	PF12874.7	3.1e-11	1	2
ENSACIP00000025706	zf-met	PF12874.7	3.1e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000026379	-	2928	-	ENSACIP00000025706	976 (aa)	-	-

Gene Model

Click here to download ENSACIG00000019922's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000019922's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000019922	si:ch211-212k18.5	98	43.318	ENSAPOG00000015347	sall2	62	45.169	Acanthochromis_polyacanthus
ENSACIG00000019922	si:ch211-212k18.5	99	85.481	ENSAPOG00000013387	si:ch211-212k18.5	80	84.270	Acanthochromis_polyacanthus
ENSACIG00000019922	si:ch211-212k18.5	87	47.508	ENSAOCG00000016559	sall2	53	48.433	Amphiprion_ocellaris
ENSACIG00000019922	si:ch211-212k18.5	99	82.822	ENSAOCG00000010737	si:ch211-212k18.5	79	83.044	Amphiprion_ocellaris
ENSACIG00000019922	si:ch211-212k18.5	67	48.964	ENSAPEG00000020215	sall2	82	49.089	Amphiprion_percula
ENSACIG00000019922	si:ch211-212k18.5	99	82.720	ENSAPEG00000006751	si:ch211-212k18.5	79	82.942	Amphiprion_percula
ENSACIG00000019922	si:ch211-212k18.5	89	84.422	ENSATEG00000001254	si:ch211-212k18.5	95	84.307	Anabas_testudineus
ENSACIG00000019922	si:ch211-212k18.5	53	50.736	ENSATEG00000007303	sall2	59	47.895	Anabas_testudineus
ENSACIG00000019922	si:ch211-212k18.5	68	48.528	ENSACLG00000019867	sall2	64	43.713	Astatotilapia_calliptera
ENSACIG00000019922	si:ch211-212k18.5	99	90.422	ENSACLG00000009709	si:ch211-212k18.5	80	90.432	Astatotilapia_calliptera
ENSACIG00000019922	si:ch211-212k18.5	67	50.142	ENSAMXG00000020956	sall2	58	49.209	Astyanax_mexicanus
ENSACIG00000019922	si:ch211-212k18.5	87	66.589	ENSAMXG00000010979	si:ch211-212k18.5	81	60.423	Astyanax_mexicanus
ENSACIG00000019922	si:ch211-212k18.5	99	79.044	ENSCSEG00000004426	si:ch211-212k18.5	80	79.044	Cynoglossus_semilaevis
ENSACIG00000019922	si:ch211-212k18.5	99	80.742	ENSCVAG00000007475	si:ch211-212k18.5	80	79.918	Cyprinodon_variegatus
ENSACIG00000019922	si:ch211-212k18.5	67	47.389	ENSCVAG00000006032	sall2	59	46.113	Cyprinodon_variegatus
ENSACIG00000019922	si:ch211-212k18.5	98	62.129	ENSDARG00000103316	si:ch211-212k18.5	78	61.048	Danio_rerio
ENSACIG00000019922	si:ch211-212k18.5	83	45.528	ENSDARG00000075116	sall2	59	48.459	Danio_rerio
ENSACIG00000019922	si:ch211-212k18.5	95	65.890	ENSELUG00000024534	si:ch211-212k18.5	81	61.765	Esox_lucius
ENSACIG00000019922	si:ch211-212k18.5	67	50.339	ENSELUG00000004389	sall2	66	48.421	Esox_lucius
ENSACIG00000019922	si:ch211-212k18.5	99	81.546	ENSFHEG00000017264	si:ch211-212k18.5	80	80.742	Fundulus_heteroclitus
ENSACIG00000019922	si:ch211-212k18.5	68	46.753	ENSFHEG00000017550	sall2	59	46.579	Fundulus_heteroclitus
ENSACIG00000019922	si:ch211-212k18.5	99	80.805	ENSGAFG00000003746	si:ch211-212k18.5	80	80.103	Gambusia_affinis
ENSACIG00000019922	si:ch211-212k18.5	68	47.355	ENSGAFG00000015194	sall2	59	46.990	Gambusia_affinis
ENSACIG00000019922	si:ch211-212k18.5	88	44.776	ENSHBUG00000002882	sall2	58	43.713	Haplochromis_burtoni
ENSACIG00000019922	si:ch211-212k18.5	99	90.525	ENSHBUG00000019672	si:ch211-212k18.5	85	90.535	Haplochromis_burtoni
ENSACIG00000019922	si:ch211-212k18.5	98	68.103	ENSHCOG00000002842	si:ch211-212k18.5	82	66.564	Hippocampus_comes
ENSACIG00000019922	si:ch211-212k18.5	95	61.229	ENSIPUG00000002559	sall2	75	60.233	Ictalurus_punctatus
ENSACIG00000019922	si:ch211-212k18.5	99	80.366	ENSKMAG00000019657	si:ch211-212k18.5	80	78.942	Kryptolebias_marmoratus
ENSACIG00000019922	si:ch211-212k18.5	67	47.090	ENSKMAG00000020172	sall2	58	46.896	Kryptolebias_marmoratus
ENSACIG00000019922	si:ch211-212k18.5	99	80.923	ENSLBEG00000020887	si:ch211-212k18.5	79	79.098	Labrus_bergylta
ENSACIG00000019922	si:ch211-212k18.5	87	87.281	ENSMAMG00000015887	si:ch211-212k18.5	99	85.748	Mastacembelus_armatus
ENSACIG00000019922	si:ch211-212k18.5	99	90.422	ENSMZEG00005021214	si:ch211-212k18.5	80	90.432	Maylandia_zebra
ENSACIG00000019922	si:ch211-212k18.5	88	44.810	ENSMZEG00005012103	sall2	58	43.713	Maylandia_zebra
ENSACIG00000019922	si:ch211-212k18.5	100	76.494	ENSMMOG00000012726	si:ch211-212k18.5	94	75.710	Mola_mola
ENSACIG00000019922	si:ch211-212k18.5	97	82.359	ENSMALG00000000979	si:ch211-212k18.5	81	81.524	Monopterus_albus
ENSACIG00000019922	si:ch211-212k18.5	88	46.037	ENSNBRG00000017645	sall2	62	46.722	Neolamprologus_brichardi
ENSACIG00000019922	si:ch211-212k18.5	99	85.773	ENSNBRG00000023948	si:ch211-212k18.5	82	85.170	Neolamprologus_brichardi
ENSACIG00000019922	si:ch211-212k18.5	96	79.958	ENSORLG00000030429	si:ch211-212k18.5	78	79.215	Oryzias_latipes
ENSACIG00000019922	si:ch211-212k18.5	68	47.438	ENSORLG00000026871	sall2	59	46.113	Oryzias_latipes
ENSACIG00000019922	si:ch211-212k18.5	96	80.276	ENSORLG00020008145	si:ch211-212k18.5	78	79.533	Oryzias_latipes_hni
ENSACIG00000019922	si:ch211-212k18.5	68	47.526	ENSORLG00020007873	sall2	59	47.120	Oryzias_latipes_hni
ENSACIG00000019922	si:ch211-212k18.5	96	79.427	ENSORLG00015004982	si:ch211-212k18.5	78	79.109	Oryzias_latipes_hsok
ENSACIG00000019922	si:ch211-212k18.5	68	47.837	ENSORLG00015002422	sall2	59	47.167	Oryzias_latipes_hsok
ENSACIG00000019922	si:ch211-212k18.5	68	47.706	ENSOMEG00000012904	sall2	59	46.377	Oryzias_melastigma
ENSACIG00000019922	si:ch211-212k18.5	96	78.959	ENSOMEG00000013949	si:ch211-212k18.5	78	79.215	Oryzias_melastigma
ENSACIG00000019922	si:ch211-212k18.5	89	51.380	ENSPKIG00000009207	sall2	67	50.638	Paramormyrops_kingsleyae
ENSACIG00000019922	si:ch211-212k18.5	99	73.782	ENSPMGG00000018714	si:ch211-212k18.5	87	72.435	Periophthalmus_magnuspinnatus
ENSACIG00000019922	si:ch211-212k18.5	68	47.285	ENSPFOG00000016504	sall2	61	46.875	Poecilia_formosa
ENSACIG00000019922	si:ch211-212k18.5	99	81.218	ENSPFOG00000023705	si:ch211-212k18.5	85	79.691	Poecilia_formosa
ENSACIG00000019922	si:ch211-212k18.5	99	81.321	ENSPLAG00000002577	si:ch211-212k18.5	80	80.309	Poecilia_latipinna
ENSACIG00000019922	si:ch211-212k18.5	68	45.443	ENSPLAG00000018320	sall2	59	46.762	Poecilia_latipinna
ENSACIG00000019922	si:ch211-212k18.5	99	81.218	ENSPMEG00000016395	si:ch211-212k18.5	85	79.485	Poecilia_mexicana
ENSACIG00000019922	si:ch211-212k18.5	68	45.977	ENSPMEG00000006335	sall2	59	47.190	Poecilia_mexicana
ENSACIG00000019922	si:ch211-212k18.5	67	46.124	ENSPREG00000021908	sall2	58	46.825	Poecilia_reticulata
ENSACIG00000019922	si:ch211-212k18.5	99	81.011	ENSPREG00000005292	si:ch211-212k18.5	80	80.000	Poecilia_reticulata
ENSACIG00000019922	si:ch211-212k18.5	99	86.186	ENSPNYG00000021576	si:ch211-212k18.5	80	86.200	Pundamilia_nyererei
ENSACIG00000019922	si:ch211-212k18.5	67	48.603	ENSPNAG00000021463	sall2	58	48.942	Pygocentrus_nattereri
ENSACIG00000019922	si:ch211-212k18.5	95	64.768	ENSPNAG00000006123	si:ch211-212k18.5	76	64.181	Pygocentrus_nattereri
ENSACIG00000019922	si:ch211-212k18.5	99	81.493	ENSSMAG00000006241	si:ch211-212k18.5	79	79.959	Scophthalmus_maximus
ENSACIG00000019922	si:ch211-212k18.5	89	45.266	ENSSMAG00000014157	sall2	54	45.776	Scophthalmus_maximus
ENSACIG00000019922	si:ch211-212k18.5	99	85.321	ENSSDUG00000006164	si:ch211-212k18.5	79	83.809	Seriola_dumerili
ENSACIG00000019922	si:ch211-212k18.5	99	87.666	ENSSLDG00000003393	si:ch211-212k18.5	80	86.151	Seriola_lalandi_dorsalis
ENSACIG00000019922	si:ch211-212k18.5	99	84.340	ENSSPAG00000013435	si:ch211-212k18.5	82	83.436	Stegastes_partitus
ENSACIG00000019922	si:ch211-212k18.5	67	48.958	ENSSPAG00000023009	sall2	60	45.161	Stegastes_partitus
ENSACIG00000019922	si:ch211-212k18.5	90	77.677	ENSTRUG00000025082	si:ch211-212k18.5	86	73.899	Takifugu_rubripes
ENSACIG00000019922	si:ch211-212k18.5	71	43.456	ENSTRUG00000024556	sall2	59	43.974	Takifugu_rubripes
ENSACIG00000019922	si:ch211-212k18.5	99	76.701	ENSXCOG00000000762	si:ch211-212k18.5	79	76.622	Xiphophorus_couchianus
ENSACIG00000019922	si:ch211-212k18.5	99	79.485	ENSXMAG00000001461	si:ch211-212k18.5	80	78.682	Xiphophorus_maculatus
ENSACIG00000019922	si:ch211-212k18.5	68	45.939	ENSXMAG00000000902	sall2	59	46.883	Xiphophorus_maculatus