EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000020351 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 1886 bases
Position: chrCCOE01001577.1:636070-637955
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000026277	RRM_1	PF00076.22	3.8e-16	1	1
ENSACIP00000026277	FYTT	PF07078.11	0.00039	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000026968	-	795	-	ENSACIP00000026277	264 (aa)	-	-

Gene Model

Click here to download ENSACIG00000020351's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000020351's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000020351	-	99	51.237	ENSACIG00000006351	alyref	98	51.389

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000020351	-	100	62.637	ENSAPOG00000000183	-	100	65.934	Acanthochromis_polyacanthus
ENSACIG00000020351	-	100	62.637	ENSAOCG00000019305	-	100	65.568	Amphiprion_ocellaris
ENSACIG00000020351	-	100	52.113	ENSAOCG00000014012	alyref	100	51.408	Amphiprion_ocellaris
ENSACIG00000020351	-	100	65.201	ENSAPEG00000013527	-	100	65.201	Amphiprion_percula
ENSACIG00000020351	-	100	52.113	ENSAPEG00000014603	alyref	100	51.408	Amphiprion_percula
ENSACIG00000020351	-	100	66.058	ENSATEG00000000382	-	100	64.964	Anabas_testudineus
ENSACIG00000020351	-	100	50.350	ENSATEG00000004307	alyref	100	52.069	Anabas_testudineus
ENSACIG00000020351	-	55	55.556	ENSAPLG00000014745	-	100	53.691	Anas_platyrhynchos
ENSACIG00000020351	-	100	77.860	ENSACLG00000010184	-	100	77.122	Astatotilapia_calliptera
ENSACIG00000020351	-	100	51.408	ENSACLG00000008432	alyref	100	51.761	Astatotilapia_calliptera
ENSACIG00000020351	-	100	52.069	ENSAMXG00000007359	alyref	100	50.345	Astyanax_mexicanus
ENSACIG00000020351	-	99	41.727	ENSCING00000013568	-	99	38.732	Ciona_intestinalis
ENSACIG00000020351	-	99	43.066	ENSCSAVG00000003324	-	99	40.590	Ciona_savignyi
ENSACIG00000020351	-	100	51.408	ENSCSEG00000017800	alyref	100	52.448	Cynoglossus_semilaevis
ENSACIG00000020351	-	100	57.509	ENSCVAG00000007789	-	100	56.410	Cyprinodon_variegatus
ENSACIG00000020351	-	100	52.817	ENSCVAG00000014869	alyref	100	54.007	Cyprinodon_variegatus
ENSACIG00000020351	-	100	53.220	ENSDARG00000077732	alyref	100	51.361	Danio_rerio
ENSACIG00000020351	-	99	38.225	FBgn0010774	Ref1	74	36.364	Drosophila_melanogaster
ENSACIG00000020351	-	99	43.972	ENSEBUG00000008253	alyref	95	38.966	Eptatretus_burgeri
ENSACIG00000020351	-	100	40.152	ENSEBUG00000006305	alyref	100	39.706	Eptatretus_burgeri
ENSACIG00000020351	-	100	52.431	ENSELUG00000017178	alyref	100	51.379	Esox_lucius
ENSACIG00000020351	-	100	54.513	ENSELUG00000008849	-	100	54.152	Esox_lucius
ENSACIG00000020351	-	61	60.123	ENSFALG00000011923	-	96	57.831	Ficedula_albicollis
ENSACIG00000020351	-	100	58.242	ENSFHEG00000004698	-	100	57.875	Fundulus_heteroclitus
ENSACIG00000020351	-	100	53.147	ENSFHEG00000019426	alyref	100	48.822	Fundulus_heteroclitus
ENSACIG00000020351	-	100	51.056	ENSGMOG00000009882	alyref	100	49.117	Gadus_morhua
ENSACIG00000020351	-	75	61.307	ENSGMOG00000013122	-	99	58.794	Gadus_morhua
ENSACIG00000020351	-	100	50.685	ENSGAFG00000006014	alyref	100	48.161	Gambusia_affinis
ENSACIG00000020351	-	100	55.678	ENSGAFG00000007573	-	100	53.480	Gambusia_affinis
ENSACIG00000020351	-	100	75.735	ENSHBUG00000001454	-	100	78.309	Haplochromis_burtoni
ENSACIG00000020351	-	100	51.408	ENSHBUG00000020196	alyref	100	51.761	Haplochromis_burtoni
ENSACIG00000020351	-	100	54.152	ENSHCOG00000012825	-	95	53.184	Hippocampus_comes
ENSACIG00000020351	-	100	52.234	ENSIPUG00000009469	alyref	100	50.345	Ictalurus_punctatus
ENSACIG00000020351	-	83	47.945	ENSSTOG00000016570	-	99	47.926	Ictidomys_tridecemlineatus
ENSACIG00000020351	-	99	60.595	ENSKMAG00000006462	-	98	60.223	Kryptolebias_marmoratus
ENSACIG00000020351	-	100	51.042	ENSKMAG00000008912	alyref	100	52.098	Kryptolebias_marmoratus
ENSACIG00000020351	-	100	50.000	ENSLBEG00000023118	alyref	90	52.045	Labrus_bergylta
ENSACIG00000020351	-	99	59.259	ENSLBEG00000012930	-	99	60.223	Labrus_bergylta
ENSACIG00000020351	-	100	60.142	ENSLBEG00000005387	-	100	61.071	Labrus_bergylta
ENSACIG00000020351	-	83	52.863	ENSLOCG00000013879	alyref	65	60.241	Lepisosteus_oculatus
ENSACIG00000020351	-	100	51.237	ENSMAMG00000003034	alyref	100	50.000	Mastacembelus_armatus
ENSACIG00000020351	-	100	60.806	ENSMAMG00000005464	-	100	62.637	Mastacembelus_armatus
ENSACIG00000020351	-	100	77.122	ENSMZEG00005012096	-	100	76.384	Maylandia_zebra
ENSACIG00000020351	-	100	51.408	ENSMZEG00005008639	alyref	100	51.761	Maylandia_zebra
ENSACIG00000020351	-	99	52.768	ENSMMOG00000007032	-	98	48.507	Mola_mola
ENSACIG00000020351	-	100	49.147	ENSMMOG00000012458	alyref	97	49.648	Mola_mola
ENSACIG00000020351	-	99	66.171	ENSMALG00000006054	-	98	65.428	Monopterus_albus
ENSACIG00000020351	-	100	45.172	ENSMLUG00000006521	-	100	43.253	Myotis_lucifugus
ENSACIG00000020351	-	98	44.043	ENSMLUG00000009247	-	98	43.116	Myotis_lucifugus
ENSACIG00000020351	-	100	46.316	ENSMLUG00000004098	-	100	42.958	Myotis_lucifugus
ENSACIG00000020351	-	98	41.980	ENSMLUG00000030671	-	99	40.411	Myotis_lucifugus
ENSACIG00000020351	-	76	48.058	ENSMLUG00000028605	-	98	42.069	Myotis_lucifugus
ENSACIG00000020351	-	98	43.403	ENSMLUG00000022178	-	98	42.403	Myotis_lucifugus
ENSACIG00000020351	-	100	42.193	ENSMLUG00000014372	-	100	42.857	Myotis_lucifugus
ENSACIG00000020351	-	98	42.414	ENSMLUG00000022467	-	98	42.807	Myotis_lucifugus
ENSACIG00000020351	-	100	50.379	ENSNGAG00000022014	-	100	50.549	Nannospalax_galili
ENSACIG00000020351	-	100	78.439	ENSNBRG00000017460	-	100	77.695	Neolamprologus_brichardi
ENSACIG00000020351	-	100	51.748	ENSNBRG00000001747	alyref	100	51.748	Neolamprologus_brichardi
ENSACIG00000020351	-	100	52.098	ENSONIG00000019434	alyref	100	51.748	Oreochromis_niloticus
ENSACIG00000020351	-	100	77.574	ENSONIG00000003296	-	100	77.574	Oreochromis_niloticus
ENSACIG00000020351	-	99	51.911	ENSORLG00000001620	-	88	52.229	Oryzias_latipes
ENSACIG00000020351	-	100	47.735	ENSORLG00020011942	alyref	100	47.020	Oryzias_latipes_hni
ENSACIG00000020351	-	99	60.886	ENSORLG00020015673	-	98	59.410	Oryzias_latipes_hni
ENSACIG00000020351	-	99	63.100	ENSORLG00015015143	-	98	63.469	Oryzias_latipes_hsok
ENSACIG00000020351	-	100	48.070	ENSORLG00015022664	alyref	100	47.333	Oryzias_latipes_hsok
ENSACIG00000020351	-	99	62.454	ENSOMEG00000007158	-	97	60.595	Oryzias_melastigma
ENSACIG00000020351	-	100	49.129	ENSOMEG00000019176	alyref	100	50.877	Oryzias_melastigma
ENSACIG00000020351	-	88	52.381	ENSPPAG00000036403	-	67	53.769	Pan_paniscus
ENSACIG00000020351	-	100	51.916	ENSPKIG00000007070	alyref	100	51.379	Paramormyrops_kingsleyae
ENSACIG00000020351	-	99	53.091	ENSPKIG00000006233	-	81	51.636	Paramormyrops_kingsleyae
ENSACIG00000020351	-	64	60.355	ENSPMGG00000012994	-	93	59.172	Periophthalmus_magnuspinnatus
ENSACIG00000020351	-	99	51.418	ENSPMGG00000016600	alyref	91	50.877	Periophthalmus_magnuspinnatus
ENSACIG00000020351	-	100	51.136	ENSPEMG00000016628	-	100	50.000	Peromyscus_maniculatus_bairdii
ENSACIG00000020351	-	100	51.203	ENSPFOG00000022825	alyref	99	48.000	Poecilia_formosa
ENSACIG00000020351	-	100	57.875	ENSPFOG00000017094	-	100	57.143	Poecilia_formosa
ENSACIG00000020351	-	100	52.069	ENSPLAG00000006948	alyref	100	48.829	Poecilia_latipinna
ENSACIG00000020351	-	100	57.875	ENSPLAG00000014380	-	100	57.143	Poecilia_latipinna
ENSACIG00000020351	-	100	57.875	ENSPMEG00000023039	-	100	57.143	Poecilia_mexicana
ENSACIG00000020351	-	100	51.203	ENSPMEG00000003547	alyref	100	48.000	Poecilia_mexicana
ENSACIG00000020351	-	100	52.414	ENSPREG00000015795	alyref	100	48.161	Poecilia_reticulata
ENSACIG00000020351	-	100	58.456	ENSPREG00000003649	-	100	57.299	Poecilia_reticulata
ENSACIG00000020351	-	100	51.408	ENSPNYG00000017498	alyref	100	51.761	Pundamilia_nyererei
ENSACIG00000020351	-	99	75.564	ENSPNYG00000002879	-	98	74.906	Pundamilia_nyererei
ENSACIG00000020351	-	100	49.129	ENSPNAG00000002531	alyref	100	48.084	Pygocentrus_nattereri
ENSACIG00000020351	-	79	56.459	ENSSBOG00000030924	-	86	53.589	Saimiri_boliviensis_boliviensis
ENSACIG00000020351	-	99	44.326	ENSSHAG00000012866	-	99	38.542	Sarcophilus_harrisii
ENSACIG00000020351	-	99	45.038	ENSSHAG00000000609	-	99	42.366	Sarcophilus_harrisii
ENSACIG00000020351	-	83	54.626	ENSSFOG00015003923	alyref	72	54.222	Scleropages_formosus
ENSACIG00000020351	-	81	52.968	ENSSFOG00015003678	alyref	88	51.163	Scleropages_formosus
ENSACIG00000020351	-	100	52.778	ENSSMAG00000009283	alyref	100	52.265	Scophthalmus_maximus
ENSACIG00000020351	-	100	61.993	ENSSMAG00000011169	-	100	63.736	Scophthalmus_maximus
ENSACIG00000020351	-	100	52.113	ENSSDUG00000016158	alyref	100	52.113	Seriola_dumerili
ENSACIG00000020351	-	100	49.648	ENSSLDG00000017803	alyref	100	50.000	Seriola_lalandi_dorsalis
ENSACIG00000020351	-	99	66.296	ENSSPAG00000017028	-	96	67.778	Stegastes_partitus
ENSACIG00000020351	-	100	59.779	ENSTRUG00000003051	-	100	59.041	Takifugu_rubripes
ENSACIG00000020351	-	100	58.088	ENSTNIG00000014136	-	100	51.103	Tetraodon_nigroviridis
ENSACIG00000020351	-	100	53.704	ENSTNIG00000011595	alyref	100	51.673	Tetraodon_nigroviridis
ENSACIG00000020351	-	78	57.282	ENSVVUG00000000272	-	83	54.854	Vulpes_vulpes
ENSACIG00000020351	-	100	49.658	ENSXCOG00000018047	alyref	99	46.488	Xiphophorus_couchianus
ENSACIG00000020351	-	100	49.658	ENSXMAG00000012218	alyref	99	47.157	Xiphophorus_maculatus
ENSACIG00000020351	-	100	56.777	ENSXMAG00000018086	-	100	56.777	Xiphophorus_maculatus