EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000020616 (Gene tree)
Gene ID: -
Gene Symbol: rab12
Alias: zgc:111945
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 7914 bases
Position: chrCCOE01000784.1:640693-648606
Accession: ZDB-GENE-050522-555
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000026622	MMR_HSR1	PF01926.23	6.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000027317	-	735	-	ENSACIP00000026622	244 (aa)	-	-

Gene Model

Click here to download ENSACIG00000020616's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000020616's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000020616	rab12	82	32.353	ENSACIG00000006558	-	83	35.714
ENSACIG00000020616	rab12	61	42.484	ENSACIG00000019631	rab11bb	80	42.484
ENSACIG00000020616	rab12	73	32.418	ENSACIG00000004859	rab34b	75	31.720
ENSACIG00000020616	rab12	67	49.390	ENSACIG00000008102	rab18b	79	49.390
ENSACIG00000020616	rab12	83	38.028	ENSACIG00000003092	rab11a	95	38.028
ENSACIG00000020616	rab12	72	39.683	ENSACIG00000021855	rab33ba	78	39.683
ENSACIG00000020616	rab12	68	37.278	ENSACIG00000022381	-	81	37.278
ENSACIG00000020616	rab12	65	35.220	ENSACIG00000014012	rab22a	81	35.220
ENSACIG00000020616	rab12	76	37.895	ENSACIG00000013630	RAB7A	81	37.278
ENSACIG00000020616	rab12	81	36.548	ENSACIG00000007154	rab6ba	83	37.288
ENSACIG00000020616	rab12	70	44.444	ENSACIG00000010619	rab15	80	44.444
ENSACIG00000020616	rab12	67	35.714	ENSACIG00000018043	rab9a	83	35.714
ENSACIG00000020616	rab12	67	31.902	ENSACIG00000000670	rabl2	71	31.288
ENSACIG00000020616	rab12	70	50.581	ENSACIG00000008584	rab13	82	50.581
ENSACIG00000020616	rab12	67	40.854	ENSACIG00000009617	rab18a	77	40.244
ENSACIG00000020616	rab12	83	37.619	ENSACIG00000017403	rab11al	76	41.818
ENSACIG00000020616	rab12	83	37.736	ENSACIG00000024376	-	75	42.424
ENSACIG00000020616	rab12	65	43.038	ENSACIG00000024374	rab11ba	65	43.038
ENSACIG00000020616	rab12	70	45.930	ENSACIG00000009006	zgc:171927	80	45.930
ENSACIG00000020616	rab12	64	34.756	ENSACIG00000000642	rab36	60	34.756
ENSACIG00000020616	rab12	66	41.718	ENSACIG00000023222	-	70	41.718
ENSACIG00000020616	rab12	70	42.442	ENSACIG00000003102	rab42a	78	42.442
ENSACIG00000020616	rab12	70	50.000	ENSACIG00000019049	rab1ab	85	57.143
ENSACIG00000020616	rab12	68	42.515	ENSACIG00000000154	RAB39B	78	42.515
ENSACIG00000020616	rab12	64	39.752	ENSACIG00000016958	si:dkey-34d22.5	72	39.752
ENSACIG00000020616	rab12	71	47.701	ENSACIG00000014625	-	85	47.701
ENSACIG00000020616	rab12	82	31.373	ENSACIG00000007739	rab9b	82	35.119
ENSACIG00000020616	rab12	66	48.750	ENSACIG00000003157	-	84	48.750
ENSACIG00000020616	rab12	70	38.286	ENSACIG00000021459	zgc:101559	76	38.286
ENSACIG00000020616	rab12	65	31.875	ENSACIG00000017824	rras	87	31.792
ENSACIG00000020616	rab12	60	41.447	ENSACIG00000013119	-	75	38.816
ENSACIG00000020616	rab12	82	34.328	ENSACIG00000019251	rab5aa	82	36.313
ENSACIG00000020616	rab12	83	38.835	ENSACIG00000019803	rab25a	84	38.043
ENSACIG00000020616	rab12	64	40.506	ENSACIG00000006949	RAB17	69	40.506
ENSACIG00000020616	rab12	58	36.301	ENSACIG00000020496	rab23	79	33.333
ENSACIG00000020616	rab12	82	35.149	ENSACIG00000014605	rab6a	76	40.000
ENSACIG00000020616	rab12	65	38.994	ENSACIG00000010914	RAB41	73	39.744
ENSACIG00000020616	rab12	77	36.170	ENSACIG00000010896	rab5c	84	35.829
ENSACIG00000020616	rab12	91	34.513	ENSACIG00000022520	rab33a	72	40.491
ENSACIG00000020616	rab12	68	36.471	ENSACIG00000011024	si:dkey-13a21.4	82	36.471
ENSACIG00000020616	rab12	73	41.341	ENSACIG00000009306	RAB15	84	41.341
ENSACIG00000020616	rab12	78	36.735	ENSACIG00000022208	-	81	38.462
ENSACIG00000020616	rab12	64	40.000	ENSACIG00000014094	rab6bb	82	37.500
ENSACIG00000020616	rab12	68	42.857	ENSACIG00000023837	-	78	42.857
ENSACIG00000020616	rab12	83	39.130	ENSACIG00000017414	rab25b	81	41.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000020616	rab12	100	80.162	ENSG00000206418	RAB12	91	87.892	Homo_sapiens
ENSACIG00000020616	rab12	89	78.082	ENSAMEG00000007452	RAB12	94	81.735	Ailuropoda_melanoleuca
ENSACIG00000020616	rab12	100	98.361	ENSAOCG00000002130	rab12	100	98.361	Amphiprion_ocellaris
ENSACIG00000020616	rab12	100	98.361	ENSAPEG00000013255	rab12	100	98.361	Amphiprion_percula
ENSACIG00000020616	rab12	100	97.541	ENSATEG00000019683	rab12	100	97.541	Anabas_testudineus
ENSACIG00000020616	rab12	89	85.388	ENSACAG00000003360	RAB12	86	88.341	Anolis_carolinensis
ENSACIG00000020616	rab12	100	98.770	ENSACLG00000007696	rab12	100	98.770	Astatotilapia_calliptera
ENSACIG00000020616	rab12	100	88.618	ENSAMXG00000004882	rab12	100	89.837	Astyanax_mexicanus
ENSACIG00000020616	rab12	93	84.211	ENSBTAG00000010356	RAB12	91	88.341	Bos_taurus
ENSACIG00000020616	rab12	93	84.211	ENSCJAG00000015468	RAB12	72	83.806	Callithrix_jacchus
ENSACIG00000020616	rab12	93	83.772	ENSCAFG00020023721	RAB12	84	83.401	Canis_lupus_dingo
ENSACIG00000020616	rab12	93	84.211	ENSCHIG00000016103	RAB12	91	88.341	Capra_hircus
ENSACIG00000020616	rab12	85	85.238	ENSCPOG00000022689	RAB12	100	89.524	Cavia_porcellus
ENSACIG00000020616	rab12	100	80.567	ENSCCAG00000022862	RAB12	91	87.892	Cebus_capucinus
ENSACIG00000020616	rab12	91	84.375	ENSCATG00000037784	RAB12	93	87.892	Cercocebus_atys
ENSACIG00000020616	rab12	84	88.780	ENSCSAG00000017569	RAB12	72	83.871	Chlorocebus_sabaeus
ENSACIG00000020616	rab12	93	82.456	ENSCPBG00000028375	RAB12	91	87.444	Chrysemys_picta_bellii
ENSACIG00000020616	rab12	89	84.475	ENSCANG00000031453	RAB12	99	88.128	Colobus_angolensis_palliatus
ENSACIG00000020616	rab12	93	83.333	ENSCGRG00001006958	Rab12	83	82.996	Cricetulus_griseus_chok1gshd
ENSACIG00000020616	rab12	100	97.951	ENSCSEG00000016933	rab12	100	97.951	Cynoglossus_semilaevis
ENSACIG00000020616	rab12	100	96.748	ENSCVAG00000003539	rab12	100	96.748	Cyprinodon_variegatus
ENSACIG00000020616	rab12	100	87.295	ENSDARG00000089428	rab12	94	93.182	Danio_rerio
ENSACIG00000020616	rab12	84	88.293	ENSDNOG00000046064	RAB12	51	87.444	Dasypus_novemcinctus
ENSACIG00000020616	rab12	92	83.260	ENSDORG00000008920	Rab12	98	87.892	Dipodomys_ordii
ENSACIG00000020616	rab12	77	65.079	ENSEBUG00000006581	rab12	89	66.484	Eptatretus_burgeri
ENSACIG00000020616	rab12	93	83.333	ENSEASG00005002926	RAB12	83	83.806	Equus_asinus_asinus
ENSACIG00000020616	rab12	93	83.333	ENSECAG00000007384	RAB12	71	83.806	Equus_caballus
ENSACIG00000020616	rab12	100	91.393	ENSELUG00000007123	rab12	100	89.344	Esox_lucius
ENSACIG00000020616	rab12	93	83.772	ENSFCAG00000027710	RAB12	72	83.401	Felis_catus
ENSACIG00000020616	rab12	100	96.735	ENSFHEG00000004319	rab12	100	96.735	Fundulus_heteroclitus
ENSACIG00000020616	rab12	86	90.952	ENSGMOG00000012335	rab12	87	89.524	Gadus_morhua
ENSACIG00000020616	rab12	92	83.772	ENSGALG00000033608	RAB12	89	87.892	Gallus_gallus
ENSACIG00000020616	rab12	90	92.694	ENSGACG00000016639	rab12	100	90.868	Gasterosteus_aculeatus
ENSACIG00000020616	rab12	93	82.018	ENSGAGG00000007278	RAB12	91	87.444	Gopherus_agassizii
ENSACIG00000020616	rab12	100	98.770	ENSHBUG00000008497	rab12	100	98.770	Haplochromis_burtoni
ENSACIG00000020616	rab12	96	80.169	ENSHGLG00000006189	RAB12	86	88.235	Heterocephalus_glaber_female
ENSACIG00000020616	rab12	100	91.803	ENSHCOG00000012376	rab12	100	90.984	Hippocampus_comes
ENSACIG00000020616	rab12	100	87.295	ENSIPUG00000017401	rab12	100	87.295	Ictalurus_punctatus
ENSACIG00000020616	rab12	92	81.858	ENSSTOG00000025122	RAB12	96	87.671	Ictidomys_tridecemlineatus
ENSACIG00000020616	rab12	91	84.375	ENSJJAG00000019064	Rab12	98	87.892	Jaculus_jaculus
ENSACIG00000020616	rab12	100	92.213	ENSKMAG00000020056	rab12	100	90.164	Kryptolebias_marmoratus
ENSACIG00000020616	rab12	100	97.131	ENSLBEG00000013756	rab12	100	97.131	Labrus_bergylta
ENSACIG00000020616	rab12	90	86.996	ENSLACG00000010461	RAB12	90	86.996	Latimeria_chalumnae
ENSACIG00000020616	rab12	93	87.336	ENSLOCG00000002680	rab12	100	87.097	Lepisosteus_oculatus
ENSACIG00000020616	rab12	100	80.081	ENSMFAG00000043551	RAB12	100	83.333	Macaca_fascicularis
ENSACIG00000020616	rab12	84	88.780	ENSMNEG00000040853	RAB12	88	87.892	Macaca_nemestrina
ENSACIG00000020616	rab12	100	97.541	ENSMAMG00000006862	rab12	100	97.541	Mastacembelus_armatus
ENSACIG00000020616	rab12	100	98.770	ENSMZEG00005024316	rab12	100	98.770	Maylandia_zebra
ENSACIG00000020616	rab12	83	84.804	ENSMGAG00000009197	RAB12	100	88.725	Meleagris_gallopavo
ENSACIG00000020616	rab12	93	83.333	ENSMAUG00000008371	Rab12	83	82.996	Mesocricetus_auratus
ENSACIG00000020616	rab12	91	83.929	ENSMICG00000030661	RAB12	93	87.444	Microcebus_murinus
ENSACIG00000020616	rab12	89	84.018	ENSMOCG00000000452	Rab12	100	87.671	Microtus_ochrogaster
ENSACIG00000020616	rab12	85	88.517	ENSMODG00000021452	RAB12	66	88.341	Monodelphis_domestica
ENSACIG00000020616	rab12	100	94.672	ENSMALG00000015762	rab12	100	93.033	Monopterus_albus
ENSACIG00000020616	rab12	93	84.211	MGP_CAROLIEiJ_G0021839	Rab12	84	83.806	Mus_caroli
ENSACIG00000020616	rab12	93	84.211	ENSMUSG00000023460	Rab12	92	88.789	Mus_musculus
ENSACIG00000020616	rab12	93	84.211	MGP_PahariEiJ_G0020826	Rab12	92	88.789	Mus_pahari
ENSACIG00000020616	rab12	93	84.211	MGP_SPRETEiJ_G0022750	Rab12	83	83.806	Mus_spretus
ENSACIG00000020616	rab12	100	79.757	ENSMLUG00000002883	RAB12	92	87.892	Myotis_lucifugus
ENSACIG00000020616	rab12	94	81.545	ENSNGAG00000024103	-	95	87.444	Nannospalax_galili
ENSACIG00000020616	rab12	91	76.786	ENSNGAG00000019722	-	91	76.682	Nannospalax_galili
ENSACIG00000020616	rab12	100	98.770	ENSNBRG00000014428	rab12	100	98.770	Neolamprologus_brichardi
ENSACIG00000020616	rab12	100	80.162	ENSNLEG00000006939	RAB12	91	87.892	Nomascus_leucogenys
ENSACIG00000020616	rab12	97	82.008	ENSMEUG00000000493	RAB12	91	88.341	Notamacropus_eugenii
ENSACIG00000020616	rab12	89	85.388	ENSODEG00000006414	RAB12	100	89.041	Octodon_degus
ENSACIG00000020616	rab12	100	98.361	ENSONIG00000018469	rab12	100	98.361	Oreochromis_niloticus
ENSACIG00000020616	rab12	100	96.721	ENSORLG00000003902	rab12	100	96.721	Oryzias_latipes
ENSACIG00000020616	rab12	100	96.311	ENSORLG00020005131	rab12	100	96.311	Oryzias_latipes_hni
ENSACIG00000020616	rab12	100	96.311	ENSORLG00015007869	rab12	100	96.311	Oryzias_latipes_hsok
ENSACIG00000020616	rab12	100	97.541	ENSOMEG00000008191	rab12	100	97.541	Oryzias_melastigma
ENSACIG00000020616	rab12	85	84.762	ENSOGAG00000028002	RAB12	99	88.571	Otolemur_garnettii
ENSACIG00000020616	rab12	78	89.529	ENSOARG00000000728	RAB12	88	87.442	Ovis_aries
ENSACIG00000020616	rab12	84	84.541	ENSPPAG00000009152	RAB12	97	88.835	Pan_paniscus
ENSACIG00000020616	rab12	100	80.162	ENSPPRG00000024521	RAB12	91	87.892	Panthera_pardus
ENSACIG00000020616	rab12	100	80.162	ENSPTRG00000009853	RAB12	91	87.892	Pan_troglodytes
ENSACIG00000020616	rab12	100	81.377	ENSPANG00000009320	RAB12	100	84.615	Papio_anubis
ENSACIG00000020616	rab12	100	88.571	ENSPKIG00000008579	rab12	100	88.571	Paramormyrops_kingsleyae
ENSACIG00000020616	rab12	100	88.934	ENSPMGG00000001890	rab12	100	90.164	Periophthalmus_magnuspinnatus
ENSACIG00000020616	rab12	93	83.772	ENSPEMG00000021032	Rab12	77	87.892	Peromyscus_maniculatus_bairdii
ENSACIG00000020616	rab12	90	85.909	ENSPCIG00000010453	RAB12	56	88.341	Phascolarctos_cinereus
ENSACIG00000020616	rab12	100	95.902	ENSPFOG00000001579	rab12	100	95.902	Poecilia_formosa
ENSACIG00000020616	rab12	100	95.902	ENSPLAG00000013594	rab12	100	95.902	Poecilia_latipinna
ENSACIG00000020616	rab12	100	95.902	ENSPMEG00000010417	rab12	100	95.902	Poecilia_mexicana
ENSACIG00000020616	rab12	100	96.311	ENSPREG00000017487	rab12	100	96.311	Poecilia_reticulata
ENSACIG00000020616	rab12	93	83.772	ENSPPYG00000009015	-	72	83.401	Pongo_abelii
ENSACIG00000020616	rab12	100	79.757	ENSPCAG00000015007	RAB12	91	87.892	Procavia_capensis
ENSACIG00000020616	rab12	100	80.162	ENSPCOG00000019816	RAB12	91	87.892	Propithecus_coquereli
ENSACIG00000020616	rab12	100	79.757	ENSPVAG00000002757	RAB12	91	87.444	Pteropus_vampyrus
ENSACIG00000020616	rab12	100	98.770	ENSPNYG00000023905	rab12	100	98.770	Pundamilia_nyererei
ENSACIG00000020616	rab12	100	98.770	ENSPNYG00000005654	rab12	100	98.770	Pundamilia_nyererei
ENSACIG00000020616	rab12	100	88.618	ENSPNAG00000015031	rab12	100	89.837	Pygocentrus_nattereri
ENSACIG00000020616	rab12	93	82.096	ENSRNOG00000019295	Rab12	83	86.829	Rattus_norvegicus
ENSACIG00000020616	rab12	91	84.375	ENSRBIG00000028760	RAB12	96	87.892	Rhinopithecus_bieti
ENSACIG00000020616	rab12	91	84.375	ENSRROG00000019249	RAB12	93	87.892	Rhinopithecus_roxellana
ENSACIG00000020616	rab12	94	79.654	ENSSBOG00000021125	RAB12	80	88.517	Saimiri_boliviensis_boliviensis
ENSACIG00000020616	rab12	93	83.843	ENSSHAG00000001489	RAB12	90	88.670	Sarcophilus_harrisii
ENSACIG00000020616	rab12	100	96.311	ENSSMAG00000012678	rab12	100	96.311	Scophthalmus_maximus
ENSACIG00000020616	rab12	100	98.361	ENSSDUG00000008505	rab12	100	98.361	Seriola_dumerili
ENSACIG00000020616	rab12	100	98.361	ENSSLDG00000022239	rab12	100	98.361	Seriola_lalandi_dorsalis
ENSACIG00000020616	rab12	90	85.202	ENSSPUG00000003222	RAB12	91	88.789	Sphenodon_punctatus
ENSACIG00000020616	rab12	100	98.361	ENSSPAG00000010822	rab12	100	98.361	Stegastes_partitus
ENSACIG00000020616	rab12	93	84.211	ENSSSCG00000038026	RAB12	91	88.789	Sus_scrofa
ENSACIG00000020616	rab12	85	88.517	ENSTGUG00000009889	RAB12	89	88.341	Taeniopygia_guttata
ENSACIG00000020616	rab12	100	93.443	ENSTRUG00000024455	rab12	100	91.803	Takifugu_rubripes
ENSACIG00000020616	rab12	100	94.262	ENSTNIG00000014859	rab12	100	92.213	Tetraodon_nigroviridis
ENSACIG00000020616	rab12	89	84.475	ENSTTRG00000008711	RAB12	99	88.128	Tursiops_truncatus
ENSACIG00000020616	rab12	100	80.162	ENSUAMG00000018092	RAB12	91	87.892	Ursus_americanus
ENSACIG00000020616	rab12	90	83.710	ENSVVUG00000011748	RAB12	99	87.330	Vulpes_vulpes
ENSACIG00000020616	rab12	93	83.406	ENSXETG00000004289	rab12	79	83.468	Xenopus_tropicalis
ENSACIG00000020616	rab12	100	95.902	ENSXCOG00000019310	rab12	100	95.902	Xiphophorus_couchianus
ENSACIG00000020616	rab12	100	96.311	ENSXMAG00000023617	rab12	100	96.311	Xiphophorus_maculatus