EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000020679 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-217k17.7
Alias: im:7155625
Full Name: si:ch211-217k17.7
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 1647 bases
Position: chrCCOE01000627.1:4152650-4154296
Accession: ZDB-GENE-061009-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000026707	Cgr1	PF03879.14	2.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000027404	-	1020	-	ENSACIP00000026707	339 (aa)	-	-

Gene Model

Click here to download ENSACIG00000020679's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000020679's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000020679	si:ch211-217k17.7	88	68.197	ENSAPOG00000010968	si:ch211-217k17.7	100	69.180	Acanthochromis_polyacanthus
ENSACIG00000020679	si:ch211-217k17.7	57	47.264	ENSAMEG00000007330	CCDC86	54	49.239	Ailuropoda_melanoleuca
ENSACIG00000020679	si:ch211-217k17.7	88	66.447	ENSAOCG00000006303	si:ch211-217k17.7	100	68.421	Amphiprion_ocellaris
ENSACIG00000020679	si:ch211-217k17.7	88	65.132	ENSAPEG00000015364	si:ch211-217k17.7	100	67.105	Amphiprion_percula
ENSACIG00000020679	si:ch211-217k17.7	88	60.197	ENSATEG00000016386	si:ch211-217k17.7	100	62.500	Anabas_testudineus
ENSACIG00000020679	si:ch211-217k17.7	57	49.254	ENSBTAG00000014215	CCDC86	55	50.746	Bos_taurus
ENSACIG00000020679	si:ch211-217k17.7	55	47.475	ENSCPOG00000027361	CCDC86	58	48.485	Cavia_porcellus
ENSACIG00000020679	si:ch211-217k17.7	56	46.535	ENSCGRG00001006868	Ccdc86	58	47.525	Cricetulus_griseus_chok1gshd
ENSACIG00000020679	si:ch211-217k17.7	56	46.535	ENSCGRG00000012233	Ccdc86	58	47.525	Cricetulus_griseus_crigri
ENSACIG00000020679	si:ch211-217k17.7	88	55.229	ENSCSEG00000002637	si:ch211-217k17.7	100	57.190	Cynoglossus_semilaevis
ENSACIG00000020679	si:ch211-217k17.7	88	61.184	ENSCVAG00000003135	si:ch211-217k17.7	100	61.184	Cyprinodon_variegatus
ENSACIG00000020679	si:ch211-217k17.7	78	47.940	ENSDARG00000059908	si:ch211-217k17.7	90	47.940	Danio_rerio
ENSACIG00000020679	si:ch211-217k17.7	57	46.667	ENSDORG00000006899	Ccdc86	61	47.619	Dipodomys_ordii
ENSACIG00000020679	si:ch211-217k17.7	63	43.668	ENSEEUG00000011844	CCDC86	59	45.089	Erinaceus_europaeus
ENSACIG00000020679	si:ch211-217k17.7	74	54.104	ENSELUG00000022687	si:ch211-217k17.7	87	53.430	Esox_lucius
ENSACIG00000020679	si:ch211-217k17.7	77	46.691	ENSGMOG00000016242	-	89	45.522	Gadus_morhua
ENSACIG00000020679	si:ch211-217k17.7	88	60.197	ENSGAFG00000005681	si:ch211-217k17.7	100	62.500	Gambusia_affinis
ENSACIG00000020679	si:ch211-217k17.7	73	57.937	ENSGACG00000017630	si:ch211-217k17.7	99	57.937	Gasterosteus_aculeatus
ENSACIG00000020679	si:ch211-217k17.7	88	76.066	ENSHBUG00000010352	si:ch211-217k17.7	100	77.049	Haplochromis_burtoni
ENSACIG00000020679	si:ch211-217k17.7	88	59.804	ENSKMAG00000000919	si:ch211-217k17.7	99	60.703	Kryptolebias_marmoratus
ENSACIG00000020679	si:ch211-217k17.7	85	50.515	ENSLBEG00000020547	-	93	52.921	Labrus_bergylta
ENSACIG00000020679	si:ch211-217k17.7	50	42.077	ENSLACG00000001391	-	73	45.902	Latimeria_chalumnae
ENSACIG00000020679	si:ch211-217k17.7	87	63.192	ENSMAMG00000016395	si:ch211-217k17.7	99	63.518	Mastacembelus_armatus
ENSACIG00000020679	si:ch211-217k17.7	88	75.738	ENSMZEG00005019822	si:ch211-217k17.7	100	76.721	Maylandia_zebra
ENSACIG00000020679	si:ch211-217k17.7	56	48.276	ENSMOCG00000009306	Ccdc86	56	48.276	Microtus_ochrogaster
ENSACIG00000020679	si:ch211-217k17.7	88	59.868	ENSMMOG00000006446	si:ch211-217k17.7	100	59.868	Mola_mola
ENSACIG00000020679	si:ch211-217k17.7	57	47.596	MGP_CAROLIEiJ_G0022707	-	58	48.558	Mus_caroli
ENSACIG00000020679	si:ch211-217k17.7	63	44.828	MGP_SPRETEiJ_G0023621	Ccdc86	58	45.690	Mus_spretus
ENSACIG00000020679	si:ch211-217k17.7	60	50.000	ENSNGAG00000013322	Ccdc86	53	50.971	Nannospalax_galili
ENSACIG00000020679	si:ch211-217k17.7	88	68.212	ENSNBRG00000013330	-	86	89.320	Neolamprologus_brichardi
ENSACIG00000020679	si:ch211-217k17.7	88	75.000	ENSONIG00000017568	si:ch211-217k17.7	100	75.658	Oreochromis_niloticus
ENSACIG00000020679	si:ch211-217k17.7	81	56.184	ENSORLG00000006331	-	96	56.890	Oryzias_latipes
ENSACIG00000020679	si:ch211-217k17.7	81	56.738	ENSORLG00020021345	si:ch211-217k17.7	96	57.447	Oryzias_latipes_hni
ENSACIG00000020679	si:ch211-217k17.7	81	55.755	ENSORLG00015021538	si:ch211-217k17.7	96	56.383	Oryzias_latipes_hsok
ENSACIG00000020679	si:ch211-217k17.7	75	53.030	ENSOMEG00000007064	si:ch211-217k17.7	91	53.030	Oryzias_melastigma
ENSACIG00000020679	si:ch211-217k17.7	81	41.447	ENSPKIG00000016503	si:ch211-217k17.7	90	44.079	Paramormyrops_kingsleyae
ENSACIG00000020679	si:ch211-217k17.7	68	61.638	ENSPMGG00000023665	si:ch211-217k17.7	92	60.075	Periophthalmus_magnuspinnatus
ENSACIG00000020679	si:ch211-217k17.7	57	46.860	ENSPEMG00000015052	Ccdc86	58	47.826	Peromyscus_maniculatus_bairdii
ENSACIG00000020679	si:ch211-217k17.7	86	58.472	ENSPFOG00000011617	si:ch211-217k17.7	99	60.797	Poecilia_formosa
ENSACIG00000020679	si:ch211-217k17.7	86	58.140	ENSPLAG00000016122	si:ch211-217k17.7	99	60.465	Poecilia_latipinna
ENSACIG00000020679	si:ch211-217k17.7	88	58.442	ENSPMEG00000018535	si:ch211-217k17.7	100	60.714	Poecilia_mexicana
ENSACIG00000020679	si:ch211-217k17.7	88	60.714	ENSPREG00000005478	si:ch211-217k17.7	100	60.714	Poecilia_reticulata
ENSACIG00000020679	si:ch211-217k17.7	57	48.276	ENSRNOG00000020925	Ccdc86	57	49.749	Rattus_norvegicus
ENSACIG00000020679	si:ch211-217k17.7	61	46.818	ENSSBOG00000029431	CCDC86	58	47.727	Saimiri_boliviensis_boliviensis
ENSACIG00000020679	si:ch211-217k17.7	77	62.595	ENSSMAG00000007686	si:ch211-217k17.7	100	59.547	Scophthalmus_maximus
ENSACIG00000020679	si:ch211-217k17.7	88	57.705	ENSSDUG00000002689	si:ch211-217k17.7	100	58.361	Seriola_dumerili
ENSACIG00000020679	si:ch211-217k17.7	79	66.058	ENSSLDG00000016681	si:ch211-217k17.7	100	62.460	Seriola_lalandi_dorsalis
ENSACIG00000020679	si:ch211-217k17.7	88	65.132	ENSSPAG00000000367	si:ch211-217k17.7	100	67.434	Stegastes_partitus
ENSACIG00000020679	si:ch211-217k17.7	77	58.427	ENSTRUG00000024101	si:ch211-217k17.7	92	58.582	Takifugu_rubripes
ENSACIG00000020679	si:ch211-217k17.7	57	47.264	ENSUAMG00000023428	CCDC86	54	49.239	Ursus_americanus
ENSACIG00000020679	si:ch211-217k17.7	57	47.761	ENSUMAG00000011594	CCDC86	54	49.746	Ursus_maritimus
ENSACIG00000020679	si:ch211-217k17.7	88	62.914	ENSXCOG00000011207	si:ch211-217k17.7	100	62.914	Xiphophorus_couchianus
ENSACIG00000020679	si:ch211-217k17.7	88	59.868	ENSXMAG00000005529	si:ch211-217k17.7	100	62.171	Xiphophorus_maculatus