EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000020701 (Gene tree)
Gene ID: -
Gene Symbol: RNPS1
Alias: -
Full Name: RNA binding protein with serine rich domain 1
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 3399 bases
Position: chrCCOE01000244.1:1839307-1842705
Accession: 10080
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000026739	RRM_1	PF00076.22	5.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000027436	RNPS1-201	780	-	ENSACIP00000026739	259 (aa)	-	-

Gene Model

Click here to download ENSACIG00000020701's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000020701's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000020701	RNPS1	87	96.903	ENSACLG00000021537	-	86	96.903	Astatotilapia_calliptera
ENSACIG00000020701	RNPS1	95	68.000	ENSCATG00000042361	-	53	80.734	Cercocebus_atys
ENSACIG00000020701	RNPS1	99	97.287	ENSHBUG00000017337	-	93	97.287	Haplochromis_burtoni
ENSACIG00000020701	RNPS1	51	75.940	ENSJJAG00000000532	-	53	79.817	Jaculus_jaculus
ENSACIG00000020701	RNPS1	81	95.735	ENSLBEG00000015904	-	100	95.735	Labrus_bergylta
ENSACIG00000020701	RNPS1	82	93.868	ENSMAMG00000021148	-	75	93.868	Mastacembelus_armatus
ENSACIG00000020701	RNPS1	99	97.287	ENSMZEG00005006256	-	93	97.287	Maylandia_zebra
ENSACIG00000020701	RNPS1	89	81.034	ENSMMOG00000004680	-	75	81.043	Mola_mola
ENSACIG00000020701	RNPS1	87	96.903	ENSNBRG00000014540	-	84	96.903	Neolamprologus_brichardi
ENSACIG00000020701	RNPS1	99	96.899	ENSONIG00000019627	-	93	96.899	Oreochromis_niloticus
ENSACIG00000020701	RNPS1	58	70.861	ENSPTIG00000015643	RNPS1	57	84.404	Panthera_tigris_altaica
ENSACIG00000020701	RNPS1	58	72.185	ENSPCIG00000016114	-	53	82.569	Phascolarctos_cinereus