EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000020931 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-85a20.4
Alias: -
Full Name: si:dkey-85a20.4
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 4226 bases
Position: chrCCOE01001542.1:1359032-1363257
Accession: ZDB-GENE-090313-347
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000027012	SpoU_methylase	PF00588.19	8.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000027720	-	543	-	ENSACIP00000027012	181 (aa)	-	-

Gene Model

Click here to download ENSACIG00000020931's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000020931's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000020931	si:dkey-85a20.4	100	95.055	ENSAOCG00000009950	si:dkey-85a20.4	99	95.055	Amphiprion_ocellaris
ENSACIG00000020931	si:dkey-85a20.4	100	95.028	ENSAPEG00000012906	si:dkey-85a20.4	99	95.028	Amphiprion_percula
ENSACIG00000020931	si:dkey-85a20.4	100	97.238	ENSACLG00000002018	si:dkey-85a20.4	100	97.238	Astatotilapia_calliptera
ENSACIG00000020931	si:dkey-85a20.4	100	83.425	ENSAMXG00000018028	si:dkey-85a20.4	94	83.425	Astyanax_mexicanus
ENSACIG00000020931	si:dkey-85a20.4	86	53.503	ENSCING00000006232	-	61	53.503	Ciona_intestinalis
ENSACIG00000020931	si:dkey-85a20.4	86	89.032	ENSCVAG00000011124	-	100	89.032	Cyprinodon_variegatus
ENSACIG00000020931	si:dkey-85a20.4	100	78.689	ENSDARG00000092550	si:dkey-85a20.4	95	78.689	Danio_rerio
ENSACIG00000020931	si:dkey-85a20.4	99	87.222	ENSHCOG00000013439	si:dkey-85a20.4	99	87.222	Hippocampus_comes
ENSACIG00000020931	si:dkey-85a20.4	88	93.750	ENSLBEG00000008830	-	100	93.750	Labrus_bergylta
ENSACIG00000020931	si:dkey-85a20.4	100	68.852	MGP_CAROLIEiJ_G0031729	Tarbp1	55	68.852	Mus_caroli
ENSACIG00000020931	si:dkey-85a20.4	100	96.685	ENSNBRG00000014368	si:dkey-85a20.4	100	96.685	Neolamprologus_brichardi
ENSACIG00000020931	si:dkey-85a20.4	100	92.265	ENSOMEG00000001519	-	99	92.265	Oryzias_melastigma
ENSACIG00000020931	si:dkey-85a20.4	100	87.845	ENSPMGG00000019801	si:dkey-85a20.4	99	87.845	Periophthalmus_magnuspinnatus
ENSACIG00000020931	si:dkey-85a20.4	76	80.576	ENSPNAG00000019497	si:dkey-85a20.4	99	80.576	Pygocentrus_nattereri
ENSACIG00000020931	si:dkey-85a20.4	87	88.679	ENSTRUG00000021368	si:dkey-85a20.4	99	88.679	Takifugu_rubripes