EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000021013 (Gene tree)
Gene ID: -
Gene Symbol: pum1
Alias: fb96a03|si:ch211-285e16.1|wu:fb96a03|wu:fb96a08|zgc:63671
Full Name: pumilio RNA-binding family member 1
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 19830 bases
Position: chrCCOE01001626.1:880592-900421
Accession: ZDB-GENE-030131-2074
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000027154	PUF	PF00806.19	1.9e-69	1	8
ENSACIP00000027154	PUF	PF00806.19	1.9e-69	2	8
ENSACIP00000027154	PUF	PF00806.19	1.9e-69	3	8
ENSACIP00000027154	PUF	PF00806.19	1.9e-69	4	8
ENSACIP00000027154	PUF	PF00806.19	1.9e-69	5	8
ENSACIP00000027154	PUF	PF00806.19	1.9e-69	6	8
ENSACIP00000027154	PUF	PF00806.19	1.9e-69	7	8
ENSACIP00000027154	PUF	PF00806.19	1.9e-69	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000027863	-	3462	-	ENSACIP00000027154	1153 (aa)	-	-

Gene Model

Click here to download ENSACIG00000021013's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000021013's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000021013	pum1	87	74.706	ENSACIG00000010646	pum2	99	76.506

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000021013	pum1	93	90.602	ENSG00000134644	PUM1	100	81.312	Homo_sapiens
ENSACIG00000021013	pum1	100	98.710	ENSAPOG00000021632	pum1	100	99.036	Acanthochromis_polyacanthus
ENSACIG00000021013	pum1	100	76.446	ENSAMEG00000017656	PUM1	97	74.606	Ailuropoda_melanoleuca
ENSACIG00000021013	pum1	100	98.710	ENSAOCG00000003944	pum1	100	98.710	Amphiprion_ocellaris
ENSACIG00000021013	pum1	100	98.710	ENSAPEG00000014550	pum1	100	98.710	Amphiprion_percula
ENSACIG00000021013	pum1	100	98.108	ENSATEG00000016004	pum1	100	98.108	Anabas_testudineus
ENSACIG00000021013	pum1	100	77.254	ENSAPLG00000009351	PUM1	100	75.166	Anas_platyrhynchos
ENSACIG00000021013	pum1	100	76.534	ENSACAG00000000682	PUM1	98	76.036	Anolis_carolinensis
ENSACIG00000021013	pum1	93	90.361	ENSANAG00000027865	PUM1	100	81.188	Aotus_nancymaae
ENSACIG00000021013	pum1	92	98.779	ENSACLG00000019354	pum1	100	98.779	Astatotilapia_calliptera
ENSACIG00000021013	pum1	100	82.453	ENSAMXG00000020607	pum1	96	82.112	Astyanax_mexicanus
ENSACIG00000021013	pum1	100	76.846	ENSBTAG00000018979	PUM1	100	81.459	Bos_taurus
ENSACIG00000021013	pum1	100	76.675	ENSCJAG00000006035	PUM1	100	81.312	Callithrix_jacchus
ENSACIG00000021013	pum1	100	75.727	ENSCAFG00000011205	PUM1	100	72.849	Canis_familiaris
ENSACIG00000021013	pum1	87	90.602	ENSCAFG00020024616	PUM1	98	81.436	Canis_lupus_dingo
ENSACIG00000021013	pum1	100	76.846	ENSCHIG00000012952	PUM1	100	76.409	Capra_hircus
ENSACIG00000021013	pum1	100	76.427	ENSTSYG00000008868	PUM1	100	81.928	Carlito_syrichta
ENSACIG00000021013	pum1	100	76.261	ENSCPOG00000031613	PUM1	100	81.064	Cavia_porcellus
ENSACIG00000021013	pum1	93	91.084	ENSCATG00000017991	PUM1	93	91.566	Cercocebus_atys
ENSACIG00000021013	pum1	100	76.261	ENSCLAG00000007662	PUM1	100	81.064	Chinchilla_lanigera
ENSACIG00000021013	pum1	100	75.492	ENSCSAG00000001028	PUM1	100	73.663	Chlorocebus_sabaeus
ENSACIG00000021013	pum1	93	66.150	ENSCHOG00000010245	PUM1	93	65.459	Choloepus_hoffmanni
ENSACIG00000021013	pum1	93	91.566	ENSCPBG00000009288	PUM1	100	81.683	Chrysemys_picta_bellii
ENSACIG00000021013	pum1	93	90.602	ENSCANG00000042606	PUM1	100	81.312	Colobus_angolensis_palliatus
ENSACIG00000021013	pum1	100	75.642	ENSCGRG00001024949	Pum1	100	82.942	Cricetulus_griseus_chok1gshd
ENSACIG00000021013	pum1	100	75.642	ENSCGRG00000014197	Pum1	100	82.942	Cricetulus_griseus_crigri
ENSACIG00000021013	pum1	92	96.620	ENSCSEG00000015981	pum1	100	96.620	Cynoglossus_semilaevis
ENSACIG00000021013	pum1	100	97.077	ENSCVAG00000007043	pum1	100	97.077	Cyprinodon_variegatus
ENSACIG00000021013	pum1	100	84.340	ENSDARG00000099256	pum1	100	81.772	Danio_rerio
ENSACIG00000021013	pum1	100	76.758	ENSDNOG00000010939	PUM1	100	74.751	Dasypus_novemcinctus
ENSACIG00000021013	pum1	90	73.391	ENSETEG00000004355	PUM1	87	71.511	Echinops_telfairi
ENSACIG00000021013	pum1	100	76.573	ENSEASG00005010813	PUM1	100	74.647	Equus_asinus_asinus
ENSACIG00000021013	pum1	100	76.427	ENSECAG00000021369	PUM1	100	74.502	Equus_caballus
ENSACIG00000021013	pum1	76	90.222	ENSEEUG00000003871	PUM1	74	90.667	Erinaceus_europaeus
ENSACIG00000021013	pum1	100	89.060	ENSELUG00000002409	pum1	100	90.238	Esox_lucius
ENSACIG00000021013	pum1	93	91.084	ENSFCAG00000010374	PUM1	100	81.436	Felis_catus
ENSACIG00000021013	pum1	100	76.524	ENSFALG00000001214	PUM1	97	74.442	Ficedula_albicollis
ENSACIG00000021013	pum1	100	76.179	ENSFDAG00000011319	PUM1	100	80.941	Fukomys_damarensis
ENSACIG00000021013	pum1	96	90.342	ENSGALG00000042598	PUM1	99	90.342	Gallus_gallus
ENSACIG00000021013	pum1	100	97.420	ENSGAFG00000015617	pum1	100	97.420	Gambusia_affinis
ENSACIG00000021013	pum1	99	96.121	ENSGACG00000005717	pum1	100	96.121	Gasterosteus_aculeatus
ENSACIG00000021013	pum1	96	90.543	ENSGAGG00000001290	PUM1	99	90.543	Gopherus_agassizii
ENSACIG00000021013	pum1	93	90.602	ENSGGOG00000011983	PUM1	100	81.312	Gorilla_gorilla
ENSACIG00000021013	pum1	100	98.366	ENSHBUG00000018718	pum1	100	98.366	Haplochromis_burtoni
ENSACIG00000021013	pum1	100	76.179	ENSHGLG00000013819	Pum1	100	80.941	Heterocephalus_glaber_female
ENSACIG00000021013	pum1	100	76.179	ENSHGLG00100008621	Pum1	100	80.941	Heterocephalus_glaber_male
ENSACIG00000021013	pum1	92	90.499	ENSHCOG00000005149	pum1	100	89.464	Hippocampus_comes
ENSACIG00000021013	pum1	100	81.626	ENSIPUG00000020421	pum1	100	81.118	Ictalurus_punctatus
ENSACIG00000021013	pum1	100	76.573	ENSSTOG00000010757	PUM1	100	81.312	Ictidomys_tridecemlineatus
ENSACIG00000021013	pum1	100	76.573	ENSJJAG00000000530	Pum1	100	81.436	Jaculus_jaculus
ENSACIG00000021013	pum1	100	97.764	ENSKMAG00000003481	pum1	100	97.764	Kryptolebias_marmoratus
ENSACIG00000021013	pum1	100	96.733	ENSLBEG00000002527	pum1	100	96.733	Labrus_bergylta
ENSACIG00000021013	pum1	100	75.537	ENSLACG00000017188	PUM1	99	72.531	Latimeria_chalumnae
ENSACIG00000021013	pum1	100	81.833	ENSLOCG00000005210	pum1	99	80.667	Lepisosteus_oculatus
ENSACIG00000021013	pum1	100	76.325	ENSLAFG00000003178	PUM1	100	74.544	Loxodonta_africana
ENSACIG00000021013	pum1	93	91.084	ENSMFAG00000010291	PUM1	100	81.312	Macaca_fascicularis
ENSACIG00000021013	pum1	93	90.602	ENSMMUG00000013520	PUM1	100	81.312	Macaca_mulatta
ENSACIG00000021013	pum1	93	90.602	ENSMNEG00000034639	PUM1	100	81.312	Macaca_nemestrina
ENSACIG00000021013	pum1	93	90.602	ENSMLEG00000038743	PUM1	100	81.312	Mandrillus_leucophaeus
ENSACIG00000021013	pum1	100	97.850	ENSMAMG00000011606	pum1	100	97.850	Mastacembelus_armatus
ENSACIG00000021013	pum1	100	98.366	ENSMZEG00005005834	pum1	100	98.366	Maylandia_zebra
ENSACIG00000021013	pum1	100	77.152	ENSMGAG00000000724	PUM1	100	76.931	Meleagris_gallopavo
ENSACIG00000021013	pum1	100	76.388	ENSMAUG00000022090	Pum1	100	83.292	Mesocricetus_auratus
ENSACIG00000021013	pum1	93	90.602	ENSMICG00000007713	-	100	81.188	Microcebus_murinus
ENSACIG00000021013	pum1	94	89.904	ENSMICG00000012213	-	100	88.434	Microcebus_murinus
ENSACIG00000021013	pum1	100	75.828	ENSMOCG00000015463	Pum1	100	83.066	Microtus_ochrogaster
ENSACIG00000021013	pum1	86	98.313	ENSMMOG00000019817	pum1	100	71.944	Mola_mola
ENSACIG00000021013	pum1	100	76.364	ENSMODG00000017067	PUM1	100	74.440	Monodelphis_domestica
ENSACIG00000021013	pum1	100	75.497	MGP_CAROLIEiJ_G0026549	Pum1	100	80.941	Mus_caroli
ENSACIG00000021013	pum1	100	75.497	ENSMUSG00000028580	Pum1	100	80.817	Mus_musculus
ENSACIG00000021013	pum1	100	75.414	MGP_PahariEiJ_G0028881	Pum1	100	80.817	Mus_pahari
ENSACIG00000021013	pum1	100	75.993	MGP_SPRETEiJ_G0027529	Pum1	100	80.817	Mus_spretus
ENSACIG00000021013	pum1	100	76.656	ENSMPUG00000015454	PUM1	100	74.647	Mustela_putorius_furo
ENSACIG00000021013	pum1	100	76.427	ENSMLUG00000006490	PUM1	100	74.419	Myotis_lucifugus
ENSACIG00000021013	pum1	100	76.680	ENSNGAG00000002378	Pum1	100	81.312	Nannospalax_galili
ENSACIG00000021013	pum1	79	98.875	ENSNBRG00000010689	pum1	100	98.875	Neolamprologus_brichardi
ENSACIG00000021013	pum1	93	87.470	ENSNLEG00000001151	PUM1	100	79.703	Nomascus_leucogenys
ENSACIG00000021013	pum1	73	78.793	ENSMEUG00000000976	-	67	80.608	Notamacropus_eugenii
ENSACIG00000021013	pum1	81	90.654	ENSOPRG00000001776	PUM1	75	90.654	Ochotona_princeps
ENSACIG00000021013	pum1	100	76.325	ENSODEG00000003465	PUM1	100	81.064	Octodon_degus
ENSACIG00000021013	pum1	100	98.882	ENSONIG00000002290	pum1	100	98.882	Oreochromis_niloticus
ENSACIG00000021013	pum1	86	63.939	ENSOANG00000004902	-	100	61.235	Ornithorhynchus_anatinus
ENSACIG00000021013	pum1	99	76.471	ENSOCUG00000008641	PUM1	99	74.542	Oryctolagus_cuniculus
ENSACIG00000021013	pum1	100	97.172	ENSORLG00000011482	pum1	100	97.172	Oryzias_latipes
ENSACIG00000021013	pum1	100	97.172	ENSORLG00020019461	pum1	100	97.172	Oryzias_latipes_hni
ENSACIG00000021013	pum1	100	97.172	ENSORLG00015011375	pum1	100	97.172	Oryzias_latipes_hsok
ENSACIG00000021013	pum1	100	73.719	ENSOGAG00000011063	PUM1	100	71.606	Otolemur_garnettii
ENSACIG00000021013	pum1	100	76.119	ENSOARG00000001899	PUM1	100	74.003	Ovis_aries
ENSACIG00000021013	pum1	93	90.602	ENSPPAG00000044003	PUM1	100	81.312	Pan_paniscus
ENSACIG00000021013	pum1	100	76.656	ENSPPRG00000001370	PUM1	100	81.436	Panthera_pardus
ENSACIG00000021013	pum1	100	76.490	ENSPTIG00000010798	PUM1	100	81.683	Panthera_tigris_altaica
ENSACIG00000021013	pum1	93	90.602	ENSPTRG00000000453	PUM1	100	81.312	Pan_troglodytes
ENSACIG00000021013	pum1	93	91.084	ENSPANG00000016338	PUM1	100	81.312	Papio_anubis
ENSACIG00000021013	pum1	95	92.530	ENSPKIG00000010578	pum1	100	75.917	Paramormyrops_kingsleyae
ENSACIG00000021013	pum1	100	77.318	ENSPSIG00000014118	PUM1	100	75.145	Pelodiscus_sinensis
ENSACIG00000021013	pum1	79	95.209	ENSPMGG00000005836	pum1	100	95.209	Periophthalmus_magnuspinnatus
ENSACIG00000021013	pum1	100	76.388	ENSPEMG00000010009	Pum1	100	83.292	Peromyscus_maniculatus_bairdii
ENSACIG00000021013	pum1	93	91.566	ENSPCIG00000014151	PUM1	100	81.211	Phascolarctos_cinereus
ENSACIG00000021013	pum1	96	97.307	ENSPFOG00000007289	pum1	100	97.307	Poecilia_formosa
ENSACIG00000021013	pum1	100	94.398	ENSPLAG00000007256	pum1	100	97.778	Poecilia_latipinna
ENSACIG00000021013	pum1	93	97.292	ENSPMEG00000019543	pum1	99	97.292	Poecilia_mexicana
ENSACIG00000021013	pum1	100	97.334	ENSPREG00000005195	pum1	100	97.334	Poecilia_reticulata
ENSACIG00000021013	pum1	100	75.081	ENSPPYG00000001621	PUM1	100	73.268	Pongo_abelii
ENSACIG00000021013	pum1	76	92.901	ENSPCAG00000001979	PUM1	73	92.901	Procavia_capensis
ENSACIG00000021013	pum1	93	90.602	ENSPCOG00000004398	PUM1	100	81.188	Propithecus_coquereli
ENSACIG00000021013	pum1	100	74.731	ENSPVAG00000005207	PUM1	97	72.879	Pteropus_vampyrus
ENSACIG00000021013	pum1	100	98.452	ENSPNYG00000009518	pum1	100	98.452	Pundamilia_nyererei
ENSACIG00000021013	pum1	100	82.624	ENSPNAG00000026728	pum1	100	82.526	Pygocentrus_nattereri
ENSACIG00000021013	pum1	100	75.579	ENSRNOG00000011709	Pum1	100	74.314	Rattus_norvegicus
ENSACIG00000021013	pum1	93	91.084	ENSRBIG00000042521	PUM1	100	81.312	Rhinopithecus_bieti
ENSACIG00000021013	pum1	93	90.602	ENSRROG00000020156	PUM1	100	81.312	Rhinopithecus_roxellana
ENSACIG00000021013	pum1	93	90.602	ENSSBOG00000032037	PUM1	100	81.312	Saimiri_boliviensis_boliviensis
ENSACIG00000021013	pum1	100	76.553	ENSSHAG00000010918	PUM1	100	74.523	Sarcophilus_harrisii
ENSACIG00000021013	pum1	100	96.561	ENSSMAG00000010918	pum1	100	96.561	Scophthalmus_maximus
ENSACIG00000021013	pum1	100	98.280	ENSSDUG00000009021	pum1	100	98.280	Seriola_dumerili
ENSACIG00000021013	pum1	94	98.730	ENSSLDG00000009667	pum1	100	98.730	Seriola_lalandi_dorsalis
ENSACIG00000021013	pum1	93	80.111	ENSSARG00000003055	PUM1	88	79.627	Sorex_araneus
ENSACIG00000021013	pum1	100	77.261	ENSSPUG00000006267	PUM1	100	75.062	Sphenodon_punctatus
ENSACIG00000021013	pum1	100	98.796	ENSSPAG00000016636	pum1	100	98.796	Stegastes_partitus
ENSACIG00000021013	pum1	100	88.934	ENSSSCG00000003591	PUM1	95	89.336	Sus_scrofa
ENSACIG00000021013	pum1	100	96.733	ENSTRUG00000013121	pum1	100	98.000	Takifugu_rubripes
ENSACIG00000021013	pum1	100	95.983	ENSTNIG00000016983	pum1	99	95.983	Tetraodon_nigroviridis
ENSACIG00000021013	pum1	87	89.024	ENSTBEG00000013810	PUM1	89	89.024	Tupaia_belangeri
ENSACIG00000021013	pum1	94	79.436	ENSTTRG00000007436	PUM1	88	77.028	Tursiops_truncatus
ENSACIG00000021013	pum1	99	74.819	ENSUAMG00000018262	-	100	72.793	Ursus_americanus
ENSACIG00000021013	pum1	93	91.084	ENSUMAG00000009211	PUM1	57	91.566	Ursus_maritimus
ENSACIG00000021013	pum1	92	83.827	ENSVPAG00000005902	PUM1	92	81.807	Vicugna_pacos
ENSACIG00000021013	pum1	93	91.084	ENSVVUG00000014631	PUM1	100	76.330	Vulpes_vulpes
ENSACIG00000021013	pum1	100	73.488	ENSXETG00000012904	pum1	99	71.950	Xenopus_tropicalis
ENSACIG00000021013	pum1	100	97.248	ENSXMAG00000002945	pum1	100	97.884	Xiphophorus_maculatus