EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000021249 (Gene tree)
Gene ID: -
Gene Symbol: shq1
Alias: zgc:158255
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 34175 bases
Position: chrCCOE01000390.1:1176883-1211057
Accession: ZDB-GENE-070112-1412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000027444	SHQ1	PF04925.15	9.6e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000028167	-	1803	-	ENSACIP00000027444	600 (aa)	-	-

Gene Model

Click here to download ENSACIG00000021249's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000021249's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000021249	shq1	67	62.621	ENSG00000144736	SHQ1	96	72.917	Homo_sapiens
ENSACIG00000021249	shq1	100	79.869	ENSAPOG00000000397	shq1	100	80.033	Acanthochromis_polyacanthus
ENSACIG00000021249	shq1	92	51.930	ENSAMEG00000015140	SHQ1	76	60.690	Ailuropoda_melanoleuca
ENSACIG00000021249	shq1	100	80.782	ENSAOCG00000023311	shq1	100	80.945	Amphiprion_ocellaris
ENSACIG00000021249	shq1	100	80.392	ENSAPEG00000021686	shq1	100	80.392	Amphiprion_percula
ENSACIG00000021249	shq1	99	76.519	ENSATEG00000008475	shq1	99	75.862	Anabas_testudineus
ENSACIG00000021249	shq1	73	60.314	ENSAPLG00000013926	SHQ1	86	60.641	Anas_platyrhynchos
ENSACIG00000021249	shq1	70	62.998	ENSACAG00000014809	SHQ1	66	61.400	Anolis_carolinensis
ENSACIG00000021249	shq1	78	43.348	ENSANAG00000030500	-	74	44.601	Aotus_nancymaae
ENSACIG00000021249	shq1	78	59.454	ENSANAG00000029241	SHQ1	75	61.663	Aotus_nancymaae
ENSACIG00000021249	shq1	100	84.603	ENSACLG00000023077	shq1	100	81.201	Astatotilapia_calliptera
ENSACIG00000021249	shq1	70	65.566	ENSAMXG00000043822	shq1	75	65.589	Astyanax_mexicanus
ENSACIG00000021249	shq1	92	54.007	ENSBTAG00000005436	SHQ1	76	61.348	Bos_taurus
ENSACIG00000021249	shq1	70	30.394	WBGene00021655	Y48A5A.1	92	30.244	Caenorhabditis_elegans
ENSACIG00000021249	shq1	67	61.893	ENSCJAG00000015131	SHQ1	75	61.663	Callithrix_jacchus
ENSACIG00000021249	shq1	74	59.081	ENSCAFG00000006434	SHQ1	75	61.149	Canis_familiaris
ENSACIG00000021249	shq1	74	59.300	ENSCAFG00020016743	SHQ1	75	61.379	Canis_lupus_dingo
ENSACIG00000021249	shq1	92	53.913	ENSCHIG00000012271	SHQ1	68	62.069	Capra_hircus
ENSACIG00000021249	shq1	67	58.151	ENSTSYG00000014439	SHQ1	75	58.102	Carlito_syrichta
ENSACIG00000021249	shq1	84	47.471	ENSCAPG00000009343	SHQ1	62	65.000	Cavia_aperea
ENSACIG00000021249	shq1	92	52.273	ENSCPOG00000011443	SHQ1	74	60.369	Cavia_porcellus
ENSACIG00000021249	shq1	77	43.923	ENSCCAG00000036087	-	74	46.528	Cebus_capucinus
ENSACIG00000021249	shq1	67	54.126	ENSCCAG00000027080	SHQ1	73	54.273	Cebus_capucinus
ENSACIG00000021249	shq1	67	62.864	ENSCATG00000041238	SHQ1	75	62.587	Cercocebus_atys
ENSACIG00000021249	shq1	71	60.690	ENSCLAG00000004206	SHQ1	75	60.690	Chinchilla_lanigera
ENSACIG00000021249	shq1	52	59.752	ENSCSAG00000011514	SHQ1	70	59.593	Chlorocebus_sabaeus
ENSACIG00000021249	shq1	56	51.754	ENSCHOG00000003273	-	99	51.754	Choloepus_hoffmanni
ENSACIG00000021249	shq1	73	60.403	ENSCPBG00000006441	SHQ1	71	61.327	Chrysemys_picta_bellii
ENSACIG00000021249	shq1	64	44.330	ENSCING00000008013	-	97	42.466	Ciona_intestinalis
ENSACIG00000021249	shq1	64	40.409	ENSCSAVG00000002332	-	99	39.443	Ciona_savignyi
ENSACIG00000021249	shq1	78	59.081	ENSCANG00000039295	SHQ1	76	62.125	Colobus_angolensis_palliatus
ENSACIG00000021249	shq1	72	60.271	ENSCGRG00001012583	Shq1	78	59.819	Cricetulus_griseus_chok1gshd
ENSACIG00000021249	shq1	72	60.271	ENSCGRG00000009849	Shq1	78	59.819	Cricetulus_griseus_crigri
ENSACIG00000021249	shq1	99	68.882	ENSCSEG00000007829	shq1	99	70.016	Cynoglossus_semilaevis
ENSACIG00000021249	shq1	99	72.241	ENSCVAG00000020049	shq1	99	72.454	Cyprinodon_variegatus
ENSACIG00000021249	shq1	98	53.987	ENSDARG00000058522	shq1	98	52.913	Danio_rerio
ENSACIG00000021249	shq1	92	52.414	ENSDNOG00000033937	SHQ1	76	61.468	Dasypus_novemcinctus
ENSACIG00000021249	shq1	67	53.865	ENSETEG00000005766	SHQ1	76	54.023	Echinops_telfairi
ENSACIG00000021249	shq1	61	47.709	ENSEBUG00000005445	shq1	73	50.313	Eptatretus_burgeri
ENSACIG00000021249	shq1	71	61.839	ENSEASG00005002237	SHQ1	75	61.839	Equus_asinus_asinus
ENSACIG00000021249	shq1	71	61.839	ENSECAG00000015673	SHQ1	74	61.839	Equus_caballus
ENSACIG00000021249	shq1	71	61.839	ENSEEUG00000010568	SHQ1	76	61.839	Erinaceus_europaeus
ENSACIG00000021249	shq1	98	61.139	ENSELUG00000003476	shq1	99	63.306	Esox_lucius
ENSACIG00000021249	shq1	78	58.071	ENSFCAG00000012781	SHQ1	77	60.633	Felis_catus
ENSACIG00000021249	shq1	68	64.183	ENSFALG00000013428	SHQ1	71	63.908	Ficedula_albicollis
ENSACIG00000021249	shq1	67	60.533	ENSFDAG00000005595	SHQ1	67	59.677	Fukomys_damarensis
ENSACIG00000021249	shq1	98	70.470	ENSFHEG00000017552	shq1	100	71.309	Fundulus_heteroclitus
ENSACIG00000021249	shq1	64	75.773	ENSGMOG00000007350	shq1	100	75.515	Gadus_morhua
ENSACIG00000021249	shq1	71	62.212	ENSGALG00000007798	SHQ1	71	62.212	Gallus_gallus
ENSACIG00000021249	shq1	64	80.412	ENSGACG00000011797	shq1	100	80.412	Gasterosteus_aculeatus
ENSACIG00000021249	shq1	67	62.136	ENSGGOG00000034818	SHQ1	75	61.894	Gorilla_gorilla
ENSACIG00000021249	shq1	100	84.603	ENSHBUG00000010857	shq1	100	84.934	Haplochromis_burtoni
ENSACIG00000021249	shq1	92	51.220	ENSHGLG00000003637	SHQ1	68	59.770	Heterocephalus_glaber_female
ENSACIG00000021249	shq1	92	51.049	ENSHGLG00100011957	SHQ1	68	59.770	Heterocephalus_glaber_male
ENSACIG00000021249	shq1	99	64.824	ENSHCOG00000010799	shq1	99	64.657	Hippocampus_comes
ENSACIG00000021249	shq1	72	66.667	ENSIPUG00000001247	shq1	92	55.575	Ictalurus_punctatus
ENSACIG00000021249	shq1	71	60.277	ENSSTOG00000010043	SHQ1	79	59.584	Ictidomys_tridecemlineatus
ENSACIG00000021249	shq1	71	60.920	ENSJJAG00000017611	Shq1	76	60.920	Jaculus_jaculus
ENSACIG00000021249	shq1	100	74.135	ENSKMAG00000004457	shq1	100	73.641	Kryptolebias_marmoratus
ENSACIG00000021249	shq1	71	64.908	ENSLACG00000014243	SHQ1	66	64.679	Latimeria_chalumnae
ENSACIG00000021249	shq1	98	56.508	ENSLOCG00000009970	shq1	99	56.270	Lepisosteus_oculatus
ENSACIG00000021249	shq1	67	62.621	ENSMFAG00000039148	SHQ1	75	62.356	Macaca_fascicularis
ENSACIG00000021249	shq1	67	42.718	ENSMFAG00000037396	-	73	42.757	Macaca_fascicularis
ENSACIG00000021249	shq1	71	43.418	ENSMMUG00000021761	-	73	42.757	Macaca_mulatta
ENSACIG00000021249	shq1	59	61.264	ENSMMUG00000009571	SHQ1	70	61.039	Macaca_mulatta
ENSACIG00000021249	shq1	67	62.621	ENSMNEG00000032667	SHQ1	75	62.356	Macaca_nemestrina
ENSACIG00000021249	shq1	67	62.379	ENSMLEG00000038493	SHQ1	75	62.125	Mandrillus_leucophaeus
ENSACIG00000021249	shq1	99	76.252	ENSMAMG00000023432	shq1	96	76.737	Mastacembelus_armatus
ENSACIG00000021249	shq1	100	84.437	ENSMZEG00005008649	shq1	100	84.768	Maylandia_zebra
ENSACIG00000021249	shq1	99	50.242	ENSMGAG00000009640	SHQ1	72	61.149	Meleagris_gallopavo
ENSACIG00000021249	shq1	71	61.379	ENSMAUG00000022030	Shq1	77	60.920	Mesocricetus_auratus
ENSACIG00000021249	shq1	77	57.113	ENSMICG00000009224	SHQ1	75	59.862	Microcebus_murinus
ENSACIG00000021249	shq1	88	54.762	ENSMOCG00000017836	Shq1	78	60.811	Microtus_ochrogaster
ENSACIG00000021249	shq1	98	71.739	ENSMMOG00000010569	shq1	99	71.119	Mola_mola
ENSACIG00000021249	shq1	78	56.108	ENSMODG00000003926	SHQ1	78	59.268	Monodelphis_domestica
ENSACIG00000021249	shq1	99	76.987	ENSMALG00000008870	shq1	99	77.318	Monopterus_albus
ENSACIG00000021249	shq1	73	59.955	MGP_CAROLIEiJ_G0028689	Shq1	76	60.690	Mus_caroli
ENSACIG00000021249	shq1	71	60.920	ENSMUSG00000035378	Shq1	76	60.920	Mus_musculus
ENSACIG00000021249	shq1	74	60.000	MGP_PahariEiJ_G0022440	Shq1	76	61.609	Mus_pahari
ENSACIG00000021249	shq1	77	58.824	MGP_SPRETEiJ_G0029717	Shq1	76	61.149	Mus_spretus
ENSACIG00000021249	shq1	92	53.136	ENSMPUG00000017006	SHQ1	74	61.149	Mustela_putorius_furo
ENSACIG00000021249	shq1	72	55.856	ENSMLUG00000013539	SHQ1	74	59.231	Myotis_lucifugus
ENSACIG00000021249	shq1	77	50.740	ENSNGAG00000023317	Shq1	76	53.488	Nannospalax_galili
ENSACIG00000021249	shq1	85	83.689	ENSNBRG00000024004	shq1	100	83.495	Neolamprologus_brichardi
ENSACIG00000021249	shq1	78	59.623	ENSNLEG00000002731	SHQ1	75	62.125	Nomascus_leucogenys
ENSACIG00000021249	shq1	77	39.662	ENSMEUG00000009350	-	80	41.109	Notamacropus_eugenii
ENSACIG00000021249	shq1	74	57.709	ENSODEG00000009192	SHQ1	80	59.217	Octodon_degus
ENSACIG00000021249	shq1	99	85.075	ENSONIG00000020264	shq1	100	85.572	Oreochromis_niloticus
ENSACIG00000021249	shq1	90	52.724	ENSOCUG00000016695	SHQ1	74	62.529	Oryctolagus_cuniculus
ENSACIG00000021249	shq1	99	65.829	ENSORLG00000023538	shq1	99	64.657	Oryzias_latipes
ENSACIG00000021249	shq1	99	66.778	ENSORLG00020003697	shq1	99	65.776	Oryzias_latipes_hni
ENSACIG00000021249	shq1	99	65.662	ENSORLG00015021040	shq1	99	64.489	Oryzias_latipes_hsok
ENSACIG00000021249	shq1	95	68.522	ENSOMEG00000001225	shq1	97	66.957	Oryzias_melastigma
ENSACIG00000021249	shq1	78	58.178	ENSOGAG00000003898	SHQ1	77	60.731	Otolemur_garnettii
ENSACIG00000021249	shq1	92	52.696	ENSOARG00000009547	SHQ1	75	61.136	Ovis_aries
ENSACIG00000021249	shq1	77	42.083	ENSPPAG00000043263	-	73	43.488	Pan_paniscus
ENSACIG00000021249	shq1	67	62.621	ENSPPAG00000027714	SHQ1	75	62.356	Pan_paniscus
ENSACIG00000021249	shq1	94	52.129	ENSPPRG00000004769	SHQ1	77	60.633	Panthera_pardus
ENSACIG00000021249	shq1	94	49.828	ENSPTIG00000011478	SHQ1	76	57.437	Panthera_tigris_altaica
ENSACIG00000021249	shq1	67	62.621	ENSPTRG00000015106	SHQ1	75	62.356	Pan_troglodytes
ENSACIG00000021249	shq1	77	40.842	ENSPTRG00000048303	-	73	42.424	Pan_troglodytes
ENSACIG00000021249	shq1	67	63.107	ENSPANG00000002881	SHQ1	75	62.818	Papio_anubis
ENSACIG00000021249	shq1	99	53.566	ENSPKIG00000021517	shq1	72	69.042	Paramormyrops_kingsleyae
ENSACIG00000021249	shq1	73	60.987	ENSPSIG00000005536	SHQ1	72	61.556	Pelodiscus_sinensis
ENSACIG00000021249	shq1	98	61.008	ENSPMGG00000008838	shq1	98	60.672	Periophthalmus_magnuspinnatus
ENSACIG00000021249	shq1	67	61.594	ENSPEMG00000000251	Shq1	76	61.149	Peromyscus_maniculatus_bairdii
ENSACIG00000021249	shq1	72	56.689	ENSPMAG00000005372	shq1	99	56.009	Petromyzon_marinus
ENSACIG00000021249	shq1	92	68.525	ENSPFOG00000003118	shq1	99	68.571	Poecilia_formosa
ENSACIG00000021249	shq1	77	66.167	ENSPMEG00000011076	shq1	98	66.995	Poecilia_mexicana
ENSACIG00000021249	shq1	83	66.270	ENSPREG00000000591	shq1	92	68.191	Poecilia_reticulata
ENSACIG00000021249	shq1	78	58.628	ENSPPYG00000013717	SHQ1	75	62.125	Pongo_abelii
ENSACIG00000021249	shq1	68	62.590	ENSPCAG00000009035	SHQ1	76	62.529	Procavia_capensis
ENSACIG00000021249	shq1	67	61.631	ENSPCOG00000008415	SHQ1	75	61.644	Propithecus_coquereli
ENSACIG00000021249	shq1	100	84.768	ENSPNYG00000003878	shq1	100	87.252	Pundamilia_nyererei
ENSACIG00000021249	shq1	98	57.921	ENSPNAG00000026840	shq1	99	56.844	Pygocentrus_nattereri
ENSACIG00000021249	shq1	71	61.149	ENSRNOG00000005433	Shq1	72	60.690	Rattus_norvegicus
ENSACIG00000021249	shq1	78	57.627	ENSRBIG00000026280	SHQ1	75	60.563	Rhinopithecus_bieti
ENSACIG00000021249	shq1	78	59.708	ENSRROG00000034126	SHQ1	76	62.818	Rhinopithecus_roxellana
ENSACIG00000021249	shq1	67	56.068	ENSSBOG00000021038	SHQ1	73	56.351	Saimiri_boliviensis_boliviensis
ENSACIG00000021249	shq1	87	51.792	ENSSHAG00000015077	SHQ1	78	60.046	Sarcophilus_harrisii
ENSACIG00000021249	shq1	99	59.396	ENSSFOG00015016241	shq1	78	72.664	Scleropages_formosus
ENSACIG00000021249	shq1	100	76.183	ENSSMAG00000016151	shq1	100	76.672	Scophthalmus_maximus
ENSACIG00000021249	shq1	100	78.049	ENSSDUG00000011986	shq1	100	78.211	Seriola_dumerili
ENSACIG00000021249	shq1	100	78.197	ENSSLDG00000013908	shq1	100	79.344	Seriola_lalandi_dorsalis
ENSACIG00000021249	shq1	84	47.945	ENSSARG00000007119	SHQ1	60	59.467	Sorex_araneus
ENSACIG00000021249	shq1	56	59.714	ENSSPUG00000011526	-	65	59.714	Sphenodon_punctatus
ENSACIG00000021249	shq1	92	52.860	ENSSSCG00000011518	SHQ1	75	61.149	Sus_scrofa
ENSACIG00000021249	shq1	67	63.636	ENSTGUG00000009933	SHQ1	76	62.955	Taeniopygia_guttata
ENSACIG00000021249	shq1	98	66.779	ENSTRUG00000009446	shq1	99	66.779	Takifugu_rubripes
ENSACIG00000021249	shq1	77	69.936	ENSTNIG00000007354	shq1	96	73.624	Tetraodon_nigroviridis
ENSACIG00000021249	shq1	71	60.920	ENSTTRG00000005320	SHQ1	75	60.920	Tursiops_truncatus
ENSACIG00000021249	shq1	74	59.551	ENSUMAG00000024031	SHQ1	74	61.033	Ursus_maritimus
ENSACIG00000021249	shq1	73	51.304	ENSVPAG00000004880	SHQ1	59	61.709	Vicugna_pacos
ENSACIG00000021249	shq1	94	51.525	ENSVVUG00000013906	SHQ1	75	60.920	Vulpes_vulpes
ENSACIG00000021249	shq1	71	60.417	ENSXETG00000032215	shq1	99	49.100	Xenopus_tropicalis