EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000021311 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 1134 bases
Position: chrCCOE01001585.1:264600-265733
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000027499	RRM_5	PF13893.6	5.4e-12	1	2
ENSACIP00000027499	RRM_5	PF13893.6	5.4e-12	2	2
ENSACIP00000027499	RRM_1	PF00076.22	4.5e-29	1	2
ENSACIP00000027499	RRM_1	PF00076.22	4.5e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000028224	-	1017	-	ENSACIP00000027499	338 (aa)	-	-

Gene Model

Click here to download ENSACIG00000021311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000021311's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000021311	-	97	67.656	ENSACIG00000021295	rbm4.3	96	66.172
ENSACIG00000021311	-	94	51.381	ENSACIG00000016482	rbm4.1	66	57.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000021311	-	97	67.257	ENSAPOG00000002991	rbm4.3	96	64.793	Acanthochromis_polyacanthus
ENSACIG00000021311	-	100	88.793	ENSAPOG00000002953	rbm4.3	100	88.793	Acanthochromis_polyacanthus
ENSACIG00000021311	-	100	87.608	ENSAOCG00000008015	rbm4.3	100	87.320	Amphiprion_ocellaris
ENSACIG00000021311	-	97	67.456	ENSAOCG00000007992	rbm4.3	96	65.385	Amphiprion_ocellaris
ENSACIG00000021311	-	97	67.456	ENSAPEG00000017288	rbm4.3	96	65.385	Amphiprion_percula
ENSACIG00000021311	-	100	88.473	ENSAPEG00000017324	rbm4.3	100	86.744	Amphiprion_percula
ENSACIG00000021311	-	97	69.970	ENSATEG00000019395	rbm4.3	96	67.868	Anabas_testudineus
ENSACIG00000021311	-	100	89.914	ENSATEG00000019375	rbm4.3	100	89.625	Anabas_testudineus
ENSACIG00000021311	-	100	98.521	ENSACLG00000010620	-	100	98.521	Astatotilapia_calliptera
ENSACIG00000021311	-	99	66.952	ENSACLG00000010642	rbm4.3	99	66.097	Astatotilapia_calliptera
ENSACIG00000021311	-	62	75.355	ENSAMXG00000040224	rbm4.3	82	73.039	Astyanax_mexicanus
ENSACIG00000021311	-	100	82.000	ENSCSEG00000013659	rbm4.3	100	80.571	Cynoglossus_semilaevis
ENSACIG00000021311	-	100	75.731	ENSCVAG00000008508	rbm4.3	100	79.240	Cyprinodon_variegatus
ENSACIG00000021311	-	99	63.037	ENSCVAG00000008502	rbm4.3	99	63.610	Cyprinodon_variegatus
ENSACIG00000021311	-	95	70.414	ENSDARG00000022129	rbm4.3	97	68.035	Danio_rerio
ENSACIG00000021311	-	99	71.429	ENSELUG00000022150	rbm4.3	97	69.501	Esox_lucius
ENSACIG00000021311	-	99	73.639	ENSELUG00000022155	rbm4.3	99	71.920	Esox_lucius
ENSACIG00000021311	-	100	67.514	ENSELUG00000022168	rbm4.3	100	68.839	Esox_lucius
ENSACIG00000021311	-	83	81.362	ENSFHEG00000023137	rbm4.3	84	82.222	Fundulus_heteroclitus
ENSACIG00000021311	-	66	68.304	ENSGMOG00000004032	rbm4.3	53	68.304	Gadus_morhua
ENSACIG00000021311	-	100	60.227	ENSGAFG00000001935	rbm4.3	100	58.974	Gambusia_affinis
ENSACIG00000021311	-	96	62.463	ENSGACG00000019980	rbm4.3	95	61.739	Gasterosteus_aculeatus
ENSACIG00000021311	-	99	67.236	ENSHBUG00000009051	rbm4.3	99	66.382	Haplochromis_burtoni
ENSACIG00000021311	-	100	98.521	ENSHBUG00000009020	-	100	98.521	Haplochromis_burtoni
ENSACIG00000021311	-	95	72.673	ENSHCOG00000010349	rbm4.3	100	72.159	Hippocampus_comes
ENSACIG00000021311	-	100	67.614	ENSIPUG00000022943	RBM4B	100	66.193	Ictalurus_punctatus
ENSACIG00000021311	-	97	60.534	ENSKMAG00000014541	rbm4.3	95	61.176	Kryptolebias_marmoratus
ENSACIG00000021311	-	100	78.299	ENSKMAG00000017468	rbm4.3	100	75.073	Kryptolebias_marmoratus
ENSACIG00000021311	-	100	85.632	ENSLBEG00000001071	-	100	86.782	Labrus_bergylta
ENSACIG00000021311	-	55	73.797	ENSLBEG00000001025	rbm4.3	85	71.579	Labrus_bergylta
ENSACIG00000021311	-	95	60.388	ENSLOCG00000002755	rbm4.3	100	60.317	Lepisosteus_oculatus
ENSACIG00000021311	-	100	89.049	ENSMAMG00000004715	-	84	88.761	Mastacembelus_armatus
ENSACIG00000021311	-	97	66.766	ENSMAMG00000004701	rbm4.3	96	64.985	Mastacembelus_armatus
ENSACIG00000021311	-	89	89.404	ENSMZEG00005028537	-	85	89.404	Maylandia_zebra
ENSACIG00000021311	-	100	94.379	ENSMZEG00005007417	-	100	94.379	Maylandia_zebra
ENSACIG00000021311	-	99	66.952	ENSMZEG00005028540	rbm4.3	99	66.097	Maylandia_zebra
ENSACIG00000021311	-	88	70.470	ENSMZEG00005007441	rbm4.3	72	70.480	Maylandia_zebra
ENSACIG00000021311	-	97	64.602	ENSMMOG00000012191	rbm4.3	96	64.307	Mola_mola
ENSACIG00000021311	-	93	68.690	ENSMALG00000015014	-	89	64.856	Monopterus_albus
ENSACIG00000021311	-	98	65.559	ENSMALG00000003032	rbm4.3	93	64.725	Monopterus_albus
ENSACIG00000021311	-	87	91.186	ENSMALG00000003001	rbm4.3	80	92.963	Monopterus_albus
ENSACIG00000021311	-	97	66.568	ENSNBRG00000012372	rbm4.3	96	64.497	Neolamprologus_brichardi
ENSACIG00000021311	-	97	66.569	ENSONIG00000018378	rbm4.3	96	64.809	Oreochromis_niloticus
ENSACIG00000021311	-	100	98.521	ENSONIG00000018380	-	100	98.521	Oreochromis_niloticus
ENSACIG00000021311	-	100	76.286	ENSORLG00000012473	rbm4.3	100	74.571	Oryzias_latipes
ENSACIG00000021311	-	100	79.429	ENSORLG00000011589	rbm4.3	100	77.143	Oryzias_latipes
ENSACIG00000021311	-	96	57.270	ENSORLG00000024749	rbm4.3	95	53.412	Oryzias_latipes
ENSACIG00000021311	-	99	58.333	ENSORLG00020012482	rbm4.3	99	54.598	Oryzias_latipes_hni
ENSACIG00000021311	-	100	76.286	ENSORLG00020012464	rbm4.3	100	74.571	Oryzias_latipes_hni
ENSACIG00000021311	-	100	79.143	ENSORLG00020012474	rbm4.3	100	77.143	Oryzias_latipes_hni
ENSACIG00000021311	-	97	57.771	ENSORLG00015013721	rbm4.3	99	54.155	Oryzias_latipes_hsok
ENSACIG00000021311	-	100	76.286	ENSORLG00015013686	rbm4.3	100	74.571	Oryzias_latipes_hsok
ENSACIG00000021311	-	100	77.714	ENSORLG00015013698	rbm4.3	100	77.429	Oryzias_latipes_hsok
ENSACIG00000021311	-	97	76.401	ENSOMEG00000005929	rbm4.3	100	75.783	Oryzias_melastigma
ENSACIG00000021311	-	100	71.549	ENSOMEG00000005918	rbm4.3	100	71.549	Oryzias_melastigma
ENSACIG00000021311	-	97	59.064	ENSOMEG00000005950	rbm4.3	96	58.284	Oryzias_melastigma
ENSACIG00000021311	-	93	71.609	ENSPKIG00000007001	rbm4.3	100	67.714	Paramormyrops_kingsleyae
ENSACIG00000021311	-	100	74.644	ENSPLAG00000006131	rbm4.3	100	74.644	Poecilia_latipinna
ENSACIG00000021311	-	99	62.500	ENSPLAG00000006077	rbm4.3	99	60.511	Poecilia_latipinna
ENSACIG00000021311	-	99	63.248	ENSPMEG00000024260	rbm4.3	99	61.538	Poecilia_mexicana
ENSACIG00000021311	-	100	78.070	ENSPMEG00000024263	rbm4.3	100	80.994	Poecilia_mexicana
ENSACIG00000021311	-	100	74.359	ENSPMEG00000024271	rbm4.3	100	74.359	Poecilia_mexicana
ENSACIG00000021311	-	100	70.977	ENSPREG00000002156	rbm4.3	100	72.414	Poecilia_reticulata
ENSACIG00000021311	-	99	62.535	ENSPREG00000002093	-	99	62.108	Poecilia_reticulata
ENSACIG00000021311	-	99	66.667	ENSPNYG00000018564	rbm4.3	99	66.097	Pundamilia_nyererei
ENSACIG00000021311	-	100	98.521	ENSPNYG00000018541	rbm4.3	100	98.521	Pundamilia_nyererei
ENSACIG00000021311	-	100	67.403	ENSPNAG00000013053	rbm4.3	100	66.852	Pygocentrus_nattereri
ENSACIG00000021311	-	100	64.917	ENSSFOG00015015563	rbm4.3	100	63.536	Scleropages_formosus
ENSACIG00000021311	-	97	65.179	ENSSMAG00000013653	rbm4.3	96	63.095	Scophthalmus_maximus
ENSACIG00000021311	-	100	85.591	ENSSMAG00000013644	rbm4.3	100	83.862	Scophthalmus_maximus
ENSACIG00000021311	-	100	89.049	ENSSDUG00000018435	rbm4.3	100	88.761	Seriola_dumerili
ENSACIG00000021311	-	97	67.257	ENSSDUG00000018422	rbm4.3	96	62.832	Seriola_dumerili
ENSACIG00000021311	-	97	66.568	ENSSLDG00000017182	rbm4.3	96	62.130	Seriola_lalandi_dorsalis
ENSACIG00000021311	-	100	89.049	ENSSLDG00000017204	rbm4.3	100	88.761	Seriola_lalandi_dorsalis
ENSACIG00000021311	-	100	87.608	ENSSPAG00000008062	rbm4.3	100	87.320	Stegastes_partitus
ENSACIG00000021311	-	96	65.282	ENSSPAG00000008041	rbm4.3	81	63.095	Stegastes_partitus
ENSACIG00000021311	-	100	83.381	ENSTRUG00000020901	rbm4.3	100	81.948	Takifugu_rubripes
ENSACIG00000021311	-	97	62.130	ENSTRUG00000023874	rbm4.3	96	64.602	Takifugu_rubripes
ENSACIG00000021311	-	100	82.421	ENSTNIG00000005668	rbm4.3	100	82.133	Tetraodon_nigroviridis
ENSACIG00000021311	-	100	79.240	ENSXCOG00000006001	rbm4.3	100	79.825	Xiphophorus_couchianus
ENSACIG00000021311	-	97	61.765	ENSXCOG00000005996	rbm4.3	97	62.059	Xiphophorus_couchianus
ENSACIG00000021311	-	100	79.240	ENSXMAG00000021997	rbm4.3	100	79.825	Xiphophorus_maculatus
ENSACIG00000021311	-	97	61.404	ENSXMAG00000025173	rbm4.3	99	60.857	Xiphophorus_maculatus
ENSACIG00000021311	-	100	74.644	ENSXMAG00000011698	rbm4.3	100	75.499	Xiphophorus_maculatus