EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000021378 (Gene tree)
Gene ID: -
Gene Symbol: gfi1aa
Alias: gfi1.1|gfi1a|zgc:113277
Full Name: growth factor independent 1A transcription repressor a
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 2538 bases
Position: chrCCOE01000292.1:1505337-1507874
Accession: ZDB-GENE-050522-534
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000027587	zf-C2H2	PF00096.26	1.3e-23	1	5
ENSACIP00000027587	zf-C2H2	PF00096.26	1.3e-23	2	5
ENSACIP00000027587	zf-C2H2	PF00096.26	1.3e-23	3	5
ENSACIP00000027587	zf-C2H2	PF00096.26	1.3e-23	4	5
ENSACIP00000027587	zf-C2H2	PF00096.26	1.3e-23	5	5
ENSACIP00000027587	zf-met	PF12874.7	2.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000028316	-	1176	-	ENSACIP00000027587	391 (aa)	-	-

Gene Model

Click here to download ENSACIG00000021378's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000021378's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000021378	gfi1aa	52	44.828	ENSACIG00000010966	-	53	44.828
ENSACIG00000021378	gfi1aa	57	40.361	ENSACIG00000018404	-	77	40.361
ENSACIG00000021378	gfi1aa	56	44.643	ENSACIG00000022293	-	91	44.643
ENSACIG00000021378	gfi1aa	53	47.059	ENSACIG00000017050	-	96	46.429
ENSACIG00000021378	gfi1aa	66	40.000	ENSACIG00000023049	znf646	96	37.748
ENSACIG00000021378	gfi1aa	50	43.000	ENSACIG00000022738	-	99	43.000
ENSACIG00000021378	gfi1aa	68	46.358	ENSACIG00000017647	-	92	45.625
ENSACIG00000021378	gfi1aa	60	42.771	ENSACIG00000007882	-	73	42.771
ENSACIG00000021378	gfi1aa	95	43.293	ENSACIG00000013470	-	64	43.293
ENSACIG00000021378	gfi1aa	56	45.399	ENSACIG00000022658	-	94	45.399
ENSACIG00000021378	gfi1aa	56	33.871	ENSACIG00000001767	zbtb41	64	33.871
ENSACIG00000021378	gfi1aa	95	44.970	ENSACIG00000023212	-	77	44.970
ENSACIG00000021378	gfi1aa	51	41.912	ENSACIG00000012263	znf319b	88	41.912
ENSACIG00000021378	gfi1aa	50	43.452	ENSACIG00000004041	-	90	44.286
ENSACIG00000021378	gfi1aa	52	43.976	ENSACIG00000013604	-	99	43.976
ENSACIG00000021378	gfi1aa	50	42.029	ENSACIG00000017166	-	72	41.304
ENSACIG00000021378	gfi1aa	53	43.966	ENSACIG00000009780	-	70	43.966
ENSACIG00000021378	gfi1aa	52	42.135	ENSACIG00000003515	-	93	42.135
ENSACIG00000021378	gfi1aa	53	49.640	ENSACIG00000016944	-	84	49.640
ENSACIG00000021378	gfi1aa	50	40.580	ENSACIG00000013163	-	77	40.580
ENSACIG00000021378	gfi1aa	53	46.250	ENSACIG00000004666	-	98	44.681
ENSACIG00000021378	gfi1aa	50	44.375	ENSACIG00000003754	-	93	43.373
ENSACIG00000021378	gfi1aa	100	63.384	ENSACIG00000016354	gfi1ab	100	63.131
ENSACIG00000021378	gfi1aa	51	45.679	ENSACIG00000014123	znf236	59	45.679
ENSACIG00000021378	gfi1aa	54	45.238	ENSACIG00000019791	-	88	44.681
ENSACIG00000021378	gfi1aa	50	49.412	ENSACIG00000010647	-	95	49.412

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000021378	gfi1aa	100	88.722	ENSAPOG00000005043	gfi1aa	100	88.722	Acanthochromis_polyacanthus
ENSACIG00000021378	gfi1aa	100	87.469	ENSAOCG00000022957	gfi1aa	100	87.469	Amphiprion_ocellaris
ENSACIG00000021378	gfi1aa	100	87.719	ENSAPEG00000014539	gfi1aa	100	87.719	Amphiprion_percula
ENSACIG00000021378	gfi1aa	100	83.000	ENSATEG00000019026	gfi1aa	98	87.900	Anabas_testudineus
ENSACIG00000021378	gfi1aa	100	91.709	ENSACLG00000008641	gfi1aa	100	91.709	Astatotilapia_calliptera
ENSACIG00000021378	gfi1aa	100	64.304	ENSDARG00000020746	gfi1aa	100	64.304	Danio_rerio
ENSACIG00000021378	gfi1aa	100	91.049	ENSHBUG00000007389	gfi1aa	100	91.049	Haplochromis_burtoni
ENSACIG00000021378	gfi1aa	100	76.203	ENSKMAG00000002148	gfi1aa	100	76.456	Kryptolebias_marmoratus
ENSACIG00000021378	gfi1aa	100	78.894	ENSLBEG00000006603	gfi1aa	100	78.894	Labrus_bergylta
ENSACIG00000021378	gfi1aa	100	80.702	ENSMAMG00000004896	gfi1aa	100	79.198	Mastacembelus_armatus
ENSACIG00000021378	gfi1aa	100	91.709	ENSMZEG00005004578	gfi1aa	100	91.709	Maylandia_zebra
ENSACIG00000021378	gfi1aa	84	77.551	ENSMMOG00000006167	gfi1aa	99	77.551	Mola_mola
ENSACIG00000021378	gfi1aa	100	91.709	ENSNBRG00000002673	gfi1aa	100	91.709	Neolamprologus_brichardi
ENSACIG00000021378	gfi1aa	100	90.680	ENSPNYG00000002189	gfi1aa	100	90.680	Pundamilia_nyererei
ENSACIG00000021378	gfi1aa	100	79.012	ENSSMAG00000006797	gfi1aa	100	79.506	Scophthalmus_maximus
ENSACIG00000021378	gfi1aa	100	84.328	ENSSDUG00000011654	gfi1aa	100	84.328	Seriola_dumerili
ENSACIG00000021378	gfi1aa	100	84.051	ENSSLDG00000016512	gfi1aa	100	84.051	Seriola_lalandi_dorsalis
ENSACIG00000021378	gfi1aa	98	85.337	ENSSPAG00000000927	gfi1aa	94	85.337	Stegastes_partitus
ENSACIG00000021378	gfi1aa	100	77.307	ENSTRUG00000004744	gfi1aa	100	77.307	Takifugu_rubripes