EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000021400 (Gene tree)
Gene ID: -
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 6977 bases
Position: chrCCOE01000670.1:375746-382722
Accession: 37237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000027638	RRM_1	PF00076.22	6.3e-16	1	1
ENSACIP00000027628	RRM_1	PF00076.22	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000028367	PABPN1L-202	540	-	ENSACIP00000027638	179 (aa)	-	-
ENSACIT00000028357	PABPN1L-201	705	-	ENSACIP00000027628	234 (aa)	-	-

Gene Model

Click here to download ENSACIG00000021400's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000021400's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000021400	PABPN1L	79	59.211	ENSACIG00000021744	pabpn1	90	58.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000021400	PABPN1L	85	55.280	ENSG00000205022	PABPN1L	55	56.494	Homo_sapiens
ENSACIG00000021400	PABPN1L	99	86.777	ENSAPOG00000000685	PABPN1L	79	87.603	Acanthochromis_polyacanthus
ENSACIG00000021400	PABPN1L	98	86.192	ENSAOCG00000019844	PABPN1L	91	88.703	Amphiprion_ocellaris
ENSACIG00000021400	PABPN1L	98	85.774	ENSAPEG00000019534	PABPN1L	91	88.285	Amphiprion_percula
ENSACIG00000021400	PABPN1L	99	85.892	ENSATEG00000011646	PABPN1L	96	87.552	Anabas_testudineus
ENSACIG00000021400	PABPN1L	65	58.197	ENSAPLG00000009174	PABPN1L	81	64.583	Anas_platyrhynchos
ENSACIG00000021400	PABPN1L	86	58.065	ENSACAG00000013250	PABPN1L	89	59.524	Anolis_carolinensis
ENSACIG00000021400	PABPN1L	93	55.429	ENSANAG00000038178	PABPN1L	53	58.442	Aotus_nancymaae
ENSACIG00000021400	PABPN1L	98	93.671	ENSACLG00000025147	PABPN1L	91	93.671	Astatotilapia_calliptera
ENSACIG00000021400	PABPN1L	63	80.357	ENSAMXG00000010873	PABPN1L	65	66.471	Astyanax_mexicanus
ENSACIG00000021400	PABPN1L	59	66.038	ENSBTAG00000006727	-	65	66.038	Bos_taurus
ENSACIG00000021400	PABPN1L	85	60.127	ENSCJAG00000045284	PABPN1L	55	60.265	Callithrix_jacchus
ENSACIG00000021400	PABPN1L	84	56.667	ENSCAPG00000007240	PABPN1L	53	56.667	Cavia_aperea
ENSACIG00000021400	PABPN1L	66	62.712	ENSCPOG00000025951	PABPN1L	55	55.333	Cavia_porcellus
ENSACIG00000021400	PABPN1L	96	56.725	ENSCCAG00000027631	PABPN1L	57	56.970	Cebus_capucinus
ENSACIG00000021400	PABPN1L	85	56.790	ENSCATG00000031060	PABPN1L	56	58.065	Cercocebus_atys
ENSACIG00000021400	PABPN1L	77	56.934	ENSCLAG00000000704	PABPN1L	50	57.037	Chinchilla_lanigera
ENSACIG00000021400	PABPN1L	85	57.143	ENSCSAG00000002881	PABPN1L	53	58.442	Chlorocebus_sabaeus
ENSACIG00000021400	PABPN1L	81	57.419	ENSCANG00000039336	PABPN1L	55	57.419	Colobus_angolensis_palliatus
ENSACIG00000021400	PABPN1L	88	54.217	ENSCGRG00001013211	Pabpn1l	54	56.579	Cricetulus_griseus_chok1gshd
ENSACIG00000021400	PABPN1L	88	54.217	ENSCGRG00000015868	Pabpn1l	54	56.579	Cricetulus_griseus_crigri
ENSACIG00000021400	PABPN1L	98	85.106	ENSCSEG00000001142	pabpn1l	90	85.106	Cynoglossus_semilaevis
ENSACIG00000021400	PABPN1L	98	86.192	ENSCVAG00000015547	PABPN1L	91	86.192	Cyprinodon_variegatus
ENSACIG00000021400	PABPN1L	88	54.375	ENSDNOG00000034677	PABPN1L	50	60.000	Dasypus_novemcinctus
ENSACIG00000021400	PABPN1L	92	54.878	ENSEASG00005000777	PABPN1L	58	54.878	Equus_asinus_asinus
ENSACIG00000021400	PABPN1L	92	54.878	ENSECAG00000000378	PABPN1L	58	54.878	Equus_caballus
ENSACIG00000021400	PABPN1L	79	56.338	ENSEEUG00000004747	PABPN1L	59	56.338	Erinaceus_europaeus
ENSACIG00000021400	PABPN1L	97	66.383	ENSELUG00000018385	PABPN1L	90	67.660	Esox_lucius
ENSACIG00000021400	PABPN1L	72	60.465	ENSFCAG00000010465	PABPN1L	53	57.616	Felis_catus
ENSACIG00000021400	PABPN1L	79	61.538	ENSFALG00000003319	PABPN1L	63	58.000	Ficedula_albicollis
ENSACIG00000021400	PABPN1L	98	84.454	ENSFHEG00000018295	PABPN1L	91	86.134	Fundulus_heteroclitus
ENSACIG00000021400	PABPN1L	98	74.793	ENSGMOG00000001475	PABPN1L	75	84.925	Gadus_morhua
ENSACIG00000021400	PABPN1L	80	60.417	ENSGALG00000006242	PABPN1L	70	63.710	Gallus_gallus
ENSACIG00000021400	PABPN1L	98	86.611	ENSGAFG00000012565	PABPN1L	91	86.611	Gambusia_affinis
ENSACIG00000021400	PABPN1L	98	81.893	ENSGACG00000015428	PABPN1L	91	81.070	Gasterosteus_aculeatus
ENSACIG00000021400	PABPN1L	77	65.693	ENSGAGG00000010613	PABPN1L	51	61.224	Gopherus_agassizii
ENSACIG00000021400	PABPN1L	93	55.952	ENSGGOG00000012670	PABPN1L	57	57.143	Gorilla_gorilla
ENSACIG00000021400	PABPN1L	98	94.118	ENSHBUG00000002388	PABPN1L	91	94.118	Haplochromis_burtoni
ENSACIG00000021400	PABPN1L	78	56.164	ENSHGLG00000014207	PABPN1L	51	57.664	Heterocephalus_glaber_female
ENSACIG00000021400	PABPN1L	78	56.164	ENSHGLG00100005230	PABPN1L	51	57.664	Heterocephalus_glaber_male
ENSACIG00000021400	PABPN1L	98	81.557	ENSHCOG00000004151	PABPN1L	90	82.787	Hippocampus_comes
ENSACIG00000021400	PABPN1L	75	73.333	ENSIPUG00000023583	PABPN1L	88	67.429	Ictalurus_punctatus
ENSACIG00000021400	PABPN1L	87	55.000	ENSJJAG00000006433	Pabpn1l	57	55.000	Jaculus_jaculus
ENSACIG00000021400	PABPN1L	88	89.873	ENSKMAG00000001112	PABPN1L	87	93.401	Kryptolebias_marmoratus
ENSACIG00000021400	PABPN1L	98	79.253	ENSLBEG00000011647	PABPN1L	88	85.062	Labrus_bergylta
ENSACIG00000021400	PABPN1L	78	58.273	ENSLAFG00000025902	-	56	58.993	Loxodonta_africana
ENSACIG00000021400	PABPN1L	85	56.790	ENSMFAG00000002924	PABPN1L	56	58.065	Macaca_fascicularis
ENSACIG00000021400	PABPN1L	85	56.790	ENSMMUG00000012438	PABPN1L	56	58.065	Macaca_mulatta
ENSACIG00000021400	PABPN1L	85	56.790	ENSMNEG00000044808	PABPN1L	56	58.065	Macaca_nemestrina
ENSACIG00000021400	PABPN1L	85	56.173	ENSMLEG00000032667	PABPN1L	56	57.143	Mandrillus_leucophaeus
ENSACIG00000021400	PABPN1L	98	93.671	ENSMZEG00005002186	PABPN1L	91	93.671	Maylandia_zebra
ENSACIG00000021400	PABPN1L	83	53.691	ENSMAUG00000014032	Pabpn1l	55	53.691	Mesocricetus_auratus
ENSACIG00000021400	PABPN1L	92	54.878	ENSMICG00000028179	PABPN1L	56	54.878	Microcebus_murinus
ENSACIG00000021400	PABPN1L	86	49.375	ENSMOCG00000007955	Pabpn1l	57	50.980	Microtus_ochrogaster
ENSACIG00000021400	PABPN1L	88	89.806	ENSMMOG00000017714	PABPN1L	87	92.000	Mola_mola
ENSACIG00000021400	PABPN1L	98	85.714	ENSMALG00000016926	PABPN1L	91	85.294	Monopterus_albus
ENSACIG00000021400	PABPN1L	82	50.898	MGP_CAROLIEiJ_G0031670	Pabpn1l	52	53.521	Mus_caroli
ENSACIG00000021400	PABPN1L	85	54.375	ENSMUSG00000069867	Pabpn1l	53	53.741	Mus_musculus
ENSACIG00000021400	PABPN1L	82	52.096	MGP_PahariEiJ_G0023268	Pabpn1l	58	50.633	Mus_pahari
ENSACIG00000021400	PABPN1L	85	53.750	MGP_SPRETEiJ_G0032788	Pabpn1l	53	53.741	Mus_spretus
ENSACIG00000021400	PABPN1L	87	53.503	ENSNGAG00000023992	Pabpn1l	56	53.503	Nannospalax_galili
ENSACIG00000021400	PABPN1L	97	94.093	ENSNBRG00000017078	PABPN1L	100	94.093	Neolamprologus_brichardi
ENSACIG00000021400	PABPN1L	81	57.962	ENSOPRG00000005597	PABPN1L	56	57.962	Ochotona_princeps
ENSACIG00000021400	PABPN1L	88	56.688	ENSOANG00000013901	PABPN1L	56	60.135	Ornithorhynchus_anatinus
ENSACIG00000021400	PABPN1L	98	84.681	ENSORLG00000026560	PABPN1L	91	84.681	Oryzias_latipes
ENSACIG00000021400	PABPN1L	98	84.681	ENSORLG00020015068	PABPN1L	91	84.681	Oryzias_latipes_hni
ENSACIG00000021400	PABPN1L	98	84.681	ENSORLG00015000397	PABPN1L	91	84.681	Oryzias_latipes_hsok
ENSACIG00000021400	PABPN1L	98	81.780	ENSOMEG00000017896	PABPN1L	65	81.356	Oryzias_melastigma
ENSACIG00000021400	PABPN1L	94	55.882	ENSOGAG00000000433	PABPN1L	50	60.993	Otolemur_garnettii
ENSACIG00000021400	PABPN1L	72	58.519	ENSOARG00000013682	PABPN1L	51	54.140	Ovis_aries
ENSACIG00000021400	PABPN1L	85	55.901	ENSPPAG00000028866	PABPN1L	51	58.741	Pan_paniscus
ENSACIG00000021400	PABPN1L	72	59.690	ENSPPRG00000015106	PABPN1L	55	55.195	Panthera_pardus
ENSACIG00000021400	PABPN1L	85	55.901	ENSPTRG00000031120	PABPN1L	51	58.741	Pan_troglodytes
ENSACIG00000021400	PABPN1L	86	56.707	ENSPANG00000026039	PABPN1L	56	57.419	Papio_anubis
ENSACIG00000021400	PABPN1L	82	66.000	ENSPSIG00000003404	PABPN1L	83	59.748	Pelodiscus_sinensis
ENSACIG00000021400	PABPN1L	84	88.776	ENSPMGG00000013927	PABPN1L	90	87.437	Periophthalmus_magnuspinnatus
ENSACIG00000021400	PABPN1L	94	54.706	ENSPEMG00000016624	Pabpn1l	57	56.688	Peromyscus_maniculatus_bairdii
ENSACIG00000021400	PABPN1L	79	60.140	ENSPCIG00000007038	-	97	60.140	Phascolarctos_cinereus
ENSACIG00000021400	PABPN1L	98	86.611	ENSPFOG00000007001	PABPN1L	91	86.611	Poecilia_formosa
ENSACIG00000021400	PABPN1L	98	86.611	ENSPLAG00000018431	PABPN1L	91	86.611	Poecilia_latipinna
ENSACIG00000021400	PABPN1L	98	86.611	ENSPMEG00000009108	PABPN1L	91	86.611	Poecilia_mexicana
ENSACIG00000021400	PABPN1L	74	85.955	ENSPMEG00000000169	-	91	83.696	Poecilia_mexicana
ENSACIG00000021400	PABPN1L	89	91.195	ENSPREG00000022533	PABPN1L	85	92.386	Poecilia_reticulata
ENSACIG00000021400	PABPN1L	93	55.882	ENSPPYG00000007655	PABPN1L	56	57.055	Pongo_abelii
ENSACIG00000021400	PABPN1L	84	56.863	ENSPCOG00000024077	PABPN1L	53	56.863	Propithecus_coquereli
ENSACIG00000021400	PABPN1L	93	57.143	ENSPVAG00000002716	PABPN1L	55	58.125	Pteropus_vampyrus
ENSACIG00000021400	PABPN1L	98	93.671	ENSPNYG00000004803	PABPN1L	91	93.671	Pundamilia_nyererei
ENSACIG00000021400	PABPN1L	77	58.621	ENSRNOG00000029558	Pabpn1l	54	58.621	Rattus_norvegicus
ENSACIG00000021400	PABPN1L	94	55.882	ENSRBIG00000030740	PABPN1L	57	56.522	Rhinopithecus_bieti
ENSACIG00000021400	PABPN1L	97	55.172	ENSRROG00000035483	-	58	56.442	Rhinopithecus_roxellana
ENSACIG00000021400	PABPN1L	94	55.882	ENSRROG00000032240	-	57	56.522	Rhinopithecus_roxellana
ENSACIG00000021400	PABPN1L	94	55.357	ENSSBOG00000018410	PABPN1L	57	56.098	Saimiri_boliviensis_boliviensis
ENSACIG00000021400	PABPN1L	98	81.818	ENSSMAG00000021348	PABPN1L	91	83.471	Scophthalmus_maximus
ENSACIG00000021400	PABPN1L	98	87.029	ENSSDUG00000006986	PABPN1L	91	89.121	Seriola_dumerili
ENSACIG00000021400	PABPN1L	98	87.029	ENSSLDG00000021845	PABPN1L	91	89.121	Seriola_lalandi_dorsalis
ENSACIG00000021400	PABPN1L	63	57.759	ENSSARG00000005178	-	50	57.759	Sorex_araneus
ENSACIG00000021400	PABPN1L	96	57.310	ENSSPUG00000007031	PABPN1L	60	63.043	Sphenodon_punctatus
ENSACIG00000021400	PABPN1L	98	86.611	ENSSPAG00000017978	PABPN1L	91	88.703	Stegastes_partitus
ENSACIG00000021400	PABPN1L	72	60.769	ENSSSCG00000036367	PABPN1L	54	55.333	Sus_scrofa
ENSACIG00000021400	PABPN1L	97	83.815	ENSTRUG00000024725	PABPN1L	90	75.630	Takifugu_rubripes
ENSACIG00000021400	PABPN1L	82	91.146	ENSTNIG00000009416	PABPN1L	100	91.146	Tetraodon_nigroviridis
ENSACIG00000021400	PABPN1L	75	58.955	ENSTTRG00000004691	PABPN1L	51	57.042	Tursiops_truncatus
ENSACIG00000021400	PABPN1L	73	55.245	ENSXETG00000011258	pabpn1l	64	57.554	Xenopus_tropicalis
ENSACIG00000021400	PABPN1L	84	92.667	ENSXCOG00000003254	PABPN1L	85	91.878	Xiphophorus_couchianus
ENSACIG00000021400	PABPN1L	87	90.640	ENSXMAG00000029090	PABPN1L	91	90.640	Xiphophorus_maculatus