EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000021459 (Gene tree)
Gene ID: -
Gene Symbol: zgc:101559
Alias: -
Full Name: zgc:101559
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 2474 bases
Position: chrCCOE01000607.1:1799166-1801639
Accession: ZDB-GENE-041114-122
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000027707	MMR_HSR1	PF01926.23	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000028437	-	687	-	ENSACIP00000027707	228 (aa)	-	-

Gene Model

Click here to download ENSACIG00000021459's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000021459's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000021459	zgc:101559	64	30.612	ENSACIG00000009071	rheb	77	30.612
ENSACIG00000021459	zgc:101559	64	43.243	ENSACIG00000003102	rab42a	67	43.243
ENSACIG00000021459	zgc:101559	65	39.216	ENSACIG00000007739	rab9b	74	39.216
ENSACIG00000021459	zgc:101559	71	31.138	ENSACIG00000009139	dnajc27	61	31.138
ENSACIG00000021459	zgc:101559	66	35.714	ENSACIG00000006558	-	76	35.714
ENSACIG00000021459	zgc:101559	64	44.218	ENSACIG00000009306	RAB15	69	44.218
ENSACIG00000021459	zgc:101559	80	40.110	ENSACIG00000024374	rab11ba	72	40.110
ENSACIG00000021459	zgc:101559	76	41.040	ENSACIG00000024376	-	78	41.040
ENSACIG00000021459	zgc:101559	65	42.282	ENSACIG00000010914	RAB41	70	42.282
ENSACIG00000021459	zgc:101559	68	40.625	ENSACIG00000019631	rab11bb	83	40.625
ENSACIG00000021459	zgc:101559	71	45.342	ENSACIG00000003157	-	84	45.342
ENSACIG00000021459	zgc:101559	75	39.181	ENSACIG00000010896	rab5c	77	39.181
ENSACIG00000021459	zgc:101559	79	39.227	ENSACIG00000017403	rab11al	81	39.227
ENSACIG00000021459	zgc:101559	60	35.294	ENSACIG00000020496	rab23	71	35.811
ENSACIG00000021459	zgc:101559	72	39.412	ENSACIG00000022208	-	79	39.412
ENSACIG00000021459	zgc:101559	69	38.854	ENSACIG00000014094	rab6bb	76	38.854
ENSACIG00000021459	zgc:101559	83	38.095	ENSACIG00000017414	rab25b	88	38.095
ENSACIG00000021459	zgc:101559	79	65.241	ENSACIG00000021855	rab33ba	78	65.241
ENSACIG00000021459	zgc:101559	74	40.936	ENSACIG00000014012	rab22a	84	40.936
ENSACIG00000021459	zgc:101559	65	42.953	ENSACIG00000014605	rab6a	71	42.953
ENSACIG00000021459	zgc:101559	53	30.328	ENSACIG00000009110	arl4aa	60	30.328
ENSACIG00000021459	zgc:101559	57	40.299	ENSACIG00000004859	rab34b	55	40.299
ENSACIG00000021459	zgc:101559	89	32.843	ENSACIG00000000642	rab36	76	32.843
ENSACIG00000021459	zgc:101559	65	40.268	ENSACIG00000007154	rab6ba	69	40.268
ENSACIG00000021459	zgc:101559	75	40.351	ENSACIG00000019251	rab5aa	78	40.351
ENSACIG00000021459	zgc:101559	80	46.448	ENSACIG00000019049	rab1ab	88	50.000
ENSACIG00000021459	zgc:101559	72	35.758	ENSACIG00000000699	hrasb	90	36.158
ENSACIG00000021459	zgc:101559	86	36.735	ENSACIG00000008102	rab18b	93	36.735
ENSACIG00000021459	zgc:101559	81	37.696	ENSACIG00000022381	-	89	37.696
ENSACIG00000021459	zgc:101559	76	37.356	ENSACIG00000023222	-	73	37.356
ENSACIG00000021459	zgc:101559	68	33.962	ENSACIG00000023481	rasl11b	72	32.787
ENSACIG00000021459	zgc:101559	81	37.173	ENSACIG00000013630	RAB7A	89	37.173
ENSACIG00000021459	zgc:101559	64	41.333	ENSACIG00000016958	si:dkey-34d22.5	67	41.333
ENSACIG00000021459	zgc:101559	85	50.235	ENSACIG00000013119	-	80	59.627
ENSACIG00000021459	zgc:101559	93	59.813	ENSACIG00000022520	rab33a	92	59.813
ENSACIG00000021459	zgc:101559	74	47.024	ENSACIG00000014625	-	80	47.024
ENSACIG00000021459	zgc:101559	75	38.506	ENSACIG00000011024	si:dkey-13a21.4	83	38.506
ENSACIG00000021459	zgc:101559	83	37.566	ENSACIG00000019803	rab25a	85	37.566
ENSACIG00000021459	zgc:101559	73	35.057	ENSACIG00000018406	rasl11a	69	35.057
ENSACIG00000021459	zgc:101559	72	43.293	ENSACIG00000008584	rab13	76	43.293
ENSACIG00000021459	zgc:101559	61	42.143	ENSACIG00000008620	rab34a	62	42.143
ENSACIG00000021459	zgc:101559	80	39.344	ENSACIG00000003092	rab11a	84	39.344
ENSACIG00000021459	zgc:101559	61	35.507	ENSACIG00000015128	si:ch73-116o1.2	66	35.507
ENSACIG00000021459	zgc:101559	68	44.516	ENSACIG00000023837	-	72	44.516
ENSACIG00000021459	zgc:101559	76	38.286	ENSACIG00000020616	rab12	70	38.286
ENSACIG00000021459	zgc:101559	51	33.051	ENSACIG00000013359	arl4d	58	33.051
ENSACIG00000021459	zgc:101559	51	35.043	ENSACIG00000000670	rabl2	51	35.043
ENSACIG00000021459	zgc:101559	64	43.537	ENSACIG00000010619	rab15	68	43.537
ENSACIG00000021459	zgc:101559	68	45.283	ENSACIG00000000154	RAB39B	74	45.283
ENSACIG00000021459	zgc:101559	74	34.320	ENSACIG00000000100	kras	57	34.807
ENSACIG00000021459	zgc:101559	72	30.909	ENSACIG00000006949	RAB17	70	30.909
ENSACIG00000021459	zgc:101559	64	33.333	ENSACIG00000009617	rab18a	67	33.333
ENSACIG00000021459	zgc:101559	79	46.409	ENSACIG00000009006	zgc:171927	79	46.409
ENSACIG00000021459	zgc:101559	68	35.669	ENSACIG00000018043	rab9a	77	35.669

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000021459	zgc:101559	93	90.995	ENSAPOG00000007503	zgc:101559	90	90.995	Acanthochromis_polyacanthus
ENSACIG00000021459	zgc:101559	93	91.943	ENSAOCG00000024675	zgc:101559	90	91.943	Amphiprion_ocellaris
ENSACIG00000021459	zgc:101559	93	91.943	ENSAPEG00000005176	zgc:101559	90	91.943	Amphiprion_percula
ENSACIG00000021459	zgc:101559	92	89.048	ENSATEG00000007761	zgc:101559	90	89.048	Anabas_testudineus
ENSACIG00000021459	zgc:101559	92	95.238	ENSACLG00000027006	zgc:101559	89	95.238	Astatotilapia_calliptera
ENSACIG00000021459	zgc:101559	97	74.779	ENSAMXG00000040460	zgc:101559	90	74.779	Astyanax_mexicanus
ENSACIG00000021459	zgc:101559	93	84.906	ENSCSEG00000006243	zgc:101559	91	84.906	Cynoglossus_semilaevis
ENSACIG00000021459	zgc:101559	89	91.133	ENSCVAG00000019227	zgc:101559	87	91.133	Cyprinodon_variegatus
ENSACIG00000021459	zgc:101559	89	81.373	ENSDARG00000003257	zgc:101559	87	81.373	Danio_rerio
ENSACIG00000021459	zgc:101559	89	90.148	ENSFHEG00000011483	zgc:101559	87	90.148	Fundulus_heteroclitus
ENSACIG00000021459	zgc:101559	89	85.714	ENSGMOG00000011665	zgc:101559	95	85.714	Gadus_morhua
ENSACIG00000021459	zgc:101559	92	84.762	ENSGAFG00000021202	zgc:101559	90	84.762	Gambusia_affinis
ENSACIG00000021459	zgc:101559	95	82.028	ENSGACG00000001725	zgc:101559	93	82.028	Gasterosteus_aculeatus
ENSACIG00000021459	zgc:101559	92	95.238	ENSHBUG00000007827	zgc:101559	90	95.238	Haplochromis_burtoni
ENSACIG00000021459	zgc:101559	89	80.976	ENSHCOG00000009133	zgc:101559	87	82.609	Hippocampus_comes
ENSACIG00000021459	zgc:101559	81	83.152	ENSIPUG00000022394	zgc:101559	80	83.152	Ictalurus_punctatus
ENSACIG00000021459	zgc:101559	92	86.256	ENSKMAG00000002862	zgc:101559	90	86.256	Kryptolebias_marmoratus
ENSACIG00000021459	zgc:101559	92	90.952	ENSLBEG00000025798	zgc:101559	90	90.952	Labrus_bergylta
ENSACIG00000021459	zgc:101559	81	71.892	ENSLACG00000011557	zgc:101559	80	71.892	Latimeria_chalumnae
ENSACIG00000021459	zgc:101559	90	76.214	ENSLOCG00000005904	zgc:101559	88	76.214	Lepisosteus_oculatus
ENSACIG00000021459	zgc:101559	93	91.469	ENSMAMG00000017431	zgc:101559	90	91.469	Mastacembelus_armatus
ENSACIG00000021459	zgc:101559	92	95.238	ENSMZEG00005021778	zgc:101559	90	95.238	Maylandia_zebra
ENSACIG00000021459	zgc:101559	89	86.700	ENSMMOG00000019779	zgc:101559	87	86.700	Mola_mola
ENSACIG00000021459	zgc:101559	89	89.655	ENSMALG00000003712	zgc:101559	87	89.655	Monopterus_albus
ENSACIG00000021459	zgc:101559	92	95.238	ENSNBRG00000002684	zgc:101559	90	95.238	Neolamprologus_brichardi
ENSACIG00000021459	zgc:101559	92	95.238	ENSONIG00000006715	-	90	95.238	Oreochromis_niloticus
ENSACIG00000021459	zgc:101559	89	87.192	ENSORLG00000030642	zgc:101559	87	87.192	Oryzias_latipes
ENSACIG00000021459	zgc:101559	89	86.207	ENSORLG00020012685	zgc:101559	87	86.207	Oryzias_latipes_hni
ENSACIG00000021459	zgc:101559	92	85.238	ENSORLG00015016047	zgc:101559	90	85.238	Oryzias_latipes_hsok
ENSACIG00000021459	zgc:101559	92	87.143	ENSOMEG00000013128	zgc:101559	90	87.143	Oryzias_melastigma
ENSACIG00000021459	zgc:101559	90	76.699	ENSPKIG00000013397	zgc:101559	86	76.699	Paramormyrops_kingsleyae
ENSACIG00000021459	zgc:101559	92	87.143	ENSPFOG00000009101	-	90	87.143	Poecilia_formosa
ENSACIG00000021459	zgc:101559	92	87.143	ENSPLAG00000020627	zgc:101559	90	87.143	Poecilia_latipinna
ENSACIG00000021459	zgc:101559	89	90.148	ENSPMEG00000010152	zgc:101559	87	90.148	Poecilia_mexicana
ENSACIG00000021459	zgc:101559	92	87.143	ENSPREG00000007017	zgc:101559	90	87.143	Poecilia_reticulata
ENSACIG00000021459	zgc:101559	92	95.238	ENSPNYG00000012922	zgc:101559	90	95.238	Pundamilia_nyererei
ENSACIG00000021459	zgc:101559	89	81.863	ENSPNAG00000017856	zgc:101559	87	81.863	Pygocentrus_nattereri
ENSACIG00000021459	zgc:101559	90	75.728	ENSSFOG00015006175	zgc:101559	88	75.728	Scleropages_formosus
ENSACIG00000021459	zgc:101559	89	87.255	ENSSMAG00000002229	zgc:101559	86	87.255	Scophthalmus_maximus
ENSACIG00000021459	zgc:101559	89	94.118	ENSSDUG00000008151	zgc:101559	87	94.118	Seriola_dumerili
ENSACIG00000021459	zgc:101559	89	94.118	ENSSLDG00000019214	zgc:101559	87	94.118	Seriola_lalandi_dorsalis
ENSACIG00000021459	zgc:101559	93	92.417	ENSSPAG00000006404	zgc:101559	90	92.417	Stegastes_partitus
ENSACIG00000021459	zgc:101559	91	84.541	ENSTRUG00000009903	zgc:101559	88	84.541	Takifugu_rubripes
ENSACIG00000021459	zgc:101559	89	84.158	ENSTNIG00000015000	zgc:101559	86	84.158	Tetraodon_nigroviridis
ENSACIG00000021459	zgc:101559	92	86.667	ENSXCOG00000018683	zgc:101559	90	86.667	Xiphophorus_couchianus
ENSACIG00000021459	zgc:101559	92	87.143	ENSXMAG00000011171	zgc:101559	90	87.143	Xiphophorus_maculatus