EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSACIG00000021498 (Gene tree)
Gene ID
-
Gene Symbol
RBMS1 (1 of many)
Alias
C2orf12|DKFZp564H0764|HCC-4|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1
Full Name
RNA binding motif single stranded interacting protein 1
Gene Type
protein_coding
Species
Amphilophus_citrinellus
Status
putative
Strand
Plus strand
Length
14973 bases
Position
chrCCOE01001704.1:604420-619392
Accession
9907
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACIP00000027759RRM_1PF00076.224.6e-3112
ENSACIP00000027759RRM_1PF00076.224.6e-3122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACIT00000028489RBMS1 (1 of many)-2011188-ENSACIP00000027759395 (aa)--
Gene Model
Click here to download ENSACIG00000021498's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000021498's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSACIG00000021498RBMS15435.000ENSACIG00000010855ELAVL27032.906
ENSACIG00000021498RBMS19358.886ENSACIG00000021113RBMS39659.946
ENSACIG00000021498RBMS18762.209ENSACIG00000000113rbms1a8962.209
ENSACIG00000021498RBMS17773.786ENSACIG00000006987-8174.587
ENSACIG00000021498RBMS16632.500ENSACIG00000007698celf3b6935.294
ENSACIG00000021498RBMS18869.516ENSACIG00000021779rbms2a9969.597
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACIG00000021498RBMS19776.607ENSG00000153250RBMS18491.589Homo_sapiens
ENSACIG00000021498RBMS19167.222ENSAPOG00000013761rbms1a8968.023Acanthochromis_polyacanthus
ENSACIG00000021498RBMS19790.698ENSAPOG00000024437-9889.147Acanthochromis_polyacanthus
ENSACIG00000021498RBMS19476.316ENSAMEG00000012661RBMS19876.316Ailuropoda_melanoleuca
ENSACIG00000021498RBMS19167.222ENSAOCG00000010066rbms1a8968.023Amphiprion_ocellaris
ENSACIG00000021498RBMS19791.451ENSAOCG00000014482-9891.451Amphiprion_ocellaris
ENSACIG00000021498RBMS19791.192ENSAPEG00000018371-9891.192Amphiprion_percula
ENSACIG00000021498RBMS19167.222ENSAPEG00000023563rbms1a8968.023Amphiprion_percula
ENSACIG00000021498RBMS19165.833ENSATEG00000015450rbms1a8966.570Anabas_testudineus
ENSACIG00000021498RBMS19588.800ENSATEG00000018573RBMS19588.267Anabas_testudineus
ENSACIG00000021498RBMS19479.521ENSAPLG00000007282RBMS19877.635Anas_platyrhynchos
ENSACIG00000021498RBMS19778.093ENSACAG00000011984RBMS18076.289Anolis_carolinensis
ENSACIG00000021498RBMS18177.329ENSANAG00000024424RBMS110077.329Aotus_nancymaae
ENSACIG00000021498RBMS18767.151ENSACLG00000021512rbms1a9067.151Astatotilapia_calliptera
ENSACIG00000021498RBMS19792.932ENSACLG00000013048RBMS19792.932Astatotilapia_calliptera
ENSACIG00000021498RBMS19779.328ENSAMXG00000009969RBMS19481.089Astyanax_mexicanus
ENSACIG00000021498RBMS18873.563ENSAMXG00000002146rbms1a8873.563Astyanax_mexicanus
ENSACIG00000021498RBMS19478.191ENSBTAG00000005180RBMS19378.191Bos_taurus
ENSACIG00000021498RBMS19371.622ENSCJAG00000022465-9970.619Callithrix_jacchus
ENSACIG00000021498RBMS19575.132ENSCJAG00000012871-9975.132Callithrix_jacchus
ENSACIG00000021498RBMS19776.607ENSCJAG00000014861-9776.093Callithrix_jacchus
ENSACIG00000021498RBMS19477.926ENSCAFG00000009922RBMS19377.926Canis_familiaris
ENSACIG00000021498RBMS19477.394ENSCAFG00020006120RBMS19377.394Canis_lupus_dingo
ENSACIG00000021498RBMS19776.093ENSCHIG00000023380RBMS19676.093Capra_hircus
ENSACIG00000021498RBMS19776.607ENSTSYG00000005584RBMS19676.607Carlito_syrichta
ENSACIG00000021498RBMS19775.835ENSCPOG00000012310RBMS19974.235Cavia_porcellus
ENSACIG00000021498RBMS19776.607ENSCCAG00000033841RBMS19976.607Cebus_capucinus
ENSACIG00000021498RBMS19975.126ENSCATG00000043032RBMS19878.191Cercocebus_atys
ENSACIG00000021498RBMS19775.578ENSCLAG00000003031RBMS19477.660Chinchilla_lanigera
ENSACIG00000021498RBMS19776.607ENSCSAG00000015687RBMS19676.607Chlorocebus_sabaeus
ENSACIG00000021498RBMS15178.512ENSCHOG00000001579RBMS15690.123Choloepus_hoffmanni
ENSACIG00000021498RBMS19779.275ENSCPBG00000026455RBMS19679.275Chrysemys_picta_bellii
ENSACIG00000021498RBMS19776.607ENSCANG00000042152RBMS19778.191Colobus_angolensis_palliatus
ENSACIG00000021498RBMS19775.578ENSCGRG00001022833Rbms19675.578Cricetulus_griseus_chok1gshd
ENSACIG00000021498RBMS19775.578ENSCGRG00000008824Rbms19973.980Cricetulus_griseus_crigri
ENSACIG00000021498RBMS19586.207ENSCSEG00000010652RBMS19486.819Cynoglossus_semilaevis
ENSACIG00000021498RBMS19165.833ENSCSEG00000000889rbms1a9066.570Cynoglossus_semilaevis
ENSACIG00000021498RBMS19783.679ENSCVAG00000002027RBMS19686.533Cyprinodon_variegatus
ENSACIG00000021498RBMS19165.833ENSCVAG00000014698rbms1a8966.279Cyprinodon_variegatus
ENSACIG00000021498RBMS18873.066ENSDARG00000074023rbms1a8773.066Danio_rerio
ENSACIG00000021498RBMS18874.728ENSDNOG00000040691RBMS19574.526Dasypus_novemcinctus
ENSACIG00000021498RBMS19875.959ENSDORG00000007103Rbms19875.959Dipodomys_ordii
ENSACIG00000021498RBMS19468.883ENSETEG00000012135RBMS19968.883Echinops_telfairi
ENSACIG00000021498RBMS19477.926ENSEASG00005023132RBMS19875.443Equus_asinus_asinus
ENSACIG00000021498RBMS19776.350ENSECAG00000019894RBMS19676.350Equus_caballus
ENSACIG00000021498RBMS17679.070ENSEEUG00000005628RBMS17579.070Erinaceus_europaeus
ENSACIG00000021498RBMS19466.933ENSELUG00000018923rbms1a9568.376Esox_lucius
ENSACIG00000021498RBMS19873.454ENSELUG00000019328RBMS19773.454Esox_lucius
ENSACIG00000021498RBMS19775.835ENSFCAG00000012524RBMS19675.835Felis_catus
ENSACIG00000021498RBMS18879.545ENSFALG00000004440RBMS19579.320Ficedula_albicollis
ENSACIG00000021498RBMS19775.835ENSFDAG00000015692RBMS19974.235Fukomys_damarensis
ENSACIG00000021498RBMS19166.667ENSFHEG00000005662rbms1a7982.803Fundulus_heteroclitus
ENSACIG00000021498RBMS19585.333ENSFHEG00000000720RBMS19585.600Fundulus_heteroclitus
ENSACIG00000021498RBMS18766.197ENSGMOG00000000525rbms1a9966.197Gadus_morhua
ENSACIG00000021498RBMS19479.521ENSGALG00000011132RBMS19579.887Gallus_gallus
ENSACIG00000021498RBMS19166.667ENSGAFG00000011633rbms1a9567.442Gambusia_affinis
ENSACIG00000021498RBMS19683.763ENSGAFG00000007708RBMS19885.825Gambusia_affinis
ENSACIG00000021498RBMS19785.117ENSGACG00000005671RBMS18988.825Gasterosteus_aculeatus
ENSACIG00000021498RBMS19163.032ENSGACG00000015174rbms1a9167.692Gasterosteus_aculeatus
ENSACIG00000021498RBMS19779.275ENSGAGG00000007866RBMS19679.275Gopherus_agassizii
ENSACIG00000021498RBMS19774.870ENSGGOG00000043756-9873.924Gorilla_gorilla
ENSACIG00000021498RBMS19478.191ENSGGOG00000001264RBMS19778.191Gorilla_gorilla
ENSACIG00000021498RBMS18767.151ENSHBUG00000004802rbms1a9067.151Haplochromis_burtoni
ENSACIG00000021498RBMS19293.113ENSHBUG00000004516RBMS19693.113Haplochromis_burtoni
ENSACIG00000021498RBMS19775.578ENSHGLG00000010387RBMS19874.169Heterocephalus_glaber_female
ENSACIG00000021498RBMS19775.578ENSHGLG00100014105RBMS19874.169Heterocephalus_glaber_male
ENSACIG00000021498RBMS19584.615ENSHCOG00000016668RBMS19584.615Hippocampus_comes
ENSACIG00000021498RBMS19167.222ENSHCOG00000020097rbms1a8968.023Hippocampus_comes
ENSACIG00000021498RBMS19682.322ENSIPUG00000014677RBMS19682.322Ictalurus_punctatus
ENSACIG00000021498RBMS18874.713ENSIPUG00000010131RBMS18874.713Ictalurus_punctatus
ENSACIG00000021498RBMS19776.093ENSSTOG00000012501RBMS19974.490Ictidomys_tridecemlineatus
ENSACIG00000021498RBMS19775.578ENSJJAG00000016543Rbms19675.578Jaculus_jaculus
ENSACIG00000021498RBMS19887.113ENSKMAG00000013911RBMS19887.113Kryptolebias_marmoratus
ENSACIG00000021498RBMS19165.000ENSKMAG00000011839-8965.698Kryptolebias_marmoratus
ENSACIG00000021498RBMS19166.667ENSLBEG00000025962rbms1a8967.442Labrus_bergylta
ENSACIG00000021498RBMS19789.119ENSLBEG00000005787RBMS19889.119Labrus_bergylta
ENSACIG00000021498RBMS19774.690ENSLACG00000004324RBMS19973.945Latimeria_chalumnae
ENSACIG00000021498RBMS19684.127ENSLOCG00000008622rbms1a9684.127Lepisosteus_oculatus
ENSACIG00000021498RBMS19477.128ENSLAFG00000017217RBMS19877.128Loxodonta_africana
ENSACIG00000021498RBMS19975.126ENSMFAG00000000274RBMS19878.191Macaca_fascicularis
ENSACIG00000021498RBMS19776.607ENSMMUG00000016825RBMS19878.191Macaca_mulatta
ENSACIG00000021498RBMS19776.607ENSMNEG00000039425RBMS19878.191Macaca_nemestrina
ENSACIG00000021498RBMS19974.874ENSMLEG00000031517RBMS19877.926Mandrillus_leucophaeus
ENSACIG00000021498RBMS19165.000ENSMAMG00000005018rbms1a8965.698Mastacembelus_armatus
ENSACIG00000021498RBMS18889.685ENSMAMG00000003159-9289.685Mastacembelus_armatus
ENSACIG00000021498RBMS18493.333ENSMZEG00005007313RBMS19293.333Maylandia_zebra
ENSACIG00000021498RBMS18767.151ENSMZEG00005005661rbms1a9067.151Maylandia_zebra
ENSACIG00000021498RBMS18880.114ENSMGAG00000011054RBMS110079.331Meleagris_gallopavo
ENSACIG00000021498RBMS19775.578ENSMAUG00000008550Rbms19675.578Mesocricetus_auratus
ENSACIG00000021498RBMS19775.835ENSMICG00000008325RBMS19877.394Microcebus_murinus
ENSACIG00000021498RBMS19775.064ENSMOCG00000022617Rbms19675.064Microtus_ochrogaster
ENSACIG00000021498RBMS19490.836ENSMMOG00000003707RBMS19490.836Mola_mola
ENSACIG00000021498RBMS19163.611ENSMMOG00000018249rbms1a8964.244Mola_mola
ENSACIG00000021498RBMS19479.255ENSMODG00000005250RBMS19677.378Monodelphis_domestica
ENSACIG00000021498RBMS18589.552ENSMALG00000015715-9089.112Monopterus_albus
ENSACIG00000021498RBMS19165.556ENSMALG00000014235rbms1a8966.279Monopterus_albus
ENSACIG00000021498RBMS19675.584MGP_CAROLIEiJ_G0023586Rbms19575.584Mus_caroli
ENSACIG00000021498RBMS19675.844ENSMUSG00000026970Rbms19575.844Mus_musculus
ENSACIG00000021498RBMS19675.325MGP_PahariEiJ_G0025037Rbms19575.325Mus_pahari
ENSACIG00000021498RBMS19675.844MGP_SPRETEiJ_G0024508Rbms19575.844Mus_spretus
ENSACIG00000021498RBMS19773.086ENSMPUG00000000539RBMS19673.086Mustela_putorius_furo
ENSACIG00000021498RBMS19971.498ENSMLUG00000008762RBMS19971.498Myotis_lucifugus
ENSACIG00000021498RBMS19775.321ENSNGAG00000013636Rbms19675.321Nannospalax_galili
ENSACIG00000021498RBMS18889.112ENSNBRG00000015151RBMS19489.112Neolamprologus_brichardi
ENSACIG00000021498RBMS17669.103ENSNBRG00000020217rbms1a8569.103Neolamprologus_brichardi
ENSACIG00000021498RBMS19776.607ENSNLEG00000001667RBMS19678.191Nomascus_leucogenys
ENSACIG00000021498RBMS18167.702ENSMEUG00000000746RBMS110067.702Notamacropus_eugenii
ENSACIG00000021498RBMS19769.923ENSOPRG00000012431RBMS19669.923Ochotona_princeps
ENSACIG00000021498RBMS19775.578ENSODEG00000013934RBMS19675.578Octodon_degus
ENSACIG00000021498RBMS18767.151ENSONIG00000003329rbms1a8867.151Oreochromis_niloticus
ENSACIG00000021498RBMS19795.026ENSONIG00000008934RBMS19795.026Oreochromis_niloticus
ENSACIG00000021498RBMS19480.053ENSOANG00000006166RBMS19580.053Ornithorhynchus_anatinus
ENSACIG00000021498RBMS15453.909ENSOANG00000004477-9954.508Ornithorhynchus_anatinus
ENSACIG00000021498RBMS19477.660ENSOCUG00000017365RBMS19275.573Oryctolagus_cuniculus
ENSACIG00000021498RBMS19164.820ENSORLG00000003917rbms1a9065.507Oryzias_latipes
ENSACIG00000021498RBMS19878.974ENSORLG00000016818RBMS18984.571Oryzias_latipes
ENSACIG00000021498RBMS19164.167ENSORLG00020018663rbms1a9064.826Oryzias_latipes_hni
ENSACIG00000021498RBMS19878.718ENSORLG00020022335RBMS18984.286Oryzias_latipes_hni
ENSACIG00000021498RBMS19164.444ENSORLG00015016556rbms1a9065.116Oryzias_latipes_hsok
ENSACIG00000021498RBMS19878.626ENSORLG00015018208RBMS18984.857Oryzias_latipes_hsok
ENSACIG00000021498RBMS19878.228ENSOMEG00000002394RBMS19484.350Oryzias_melastigma
ENSACIG00000021498RBMS18877.119ENSOGAG00000002900RBMS19576.901Otolemur_garnettii
ENSACIG00000021498RBMS19776.093ENSOARG00000006870RBMS19676.093Ovis_aries
ENSACIG00000021498RBMS19475.000ENSPPAG00000036520-9975.000Pan_paniscus
ENSACIG00000021498RBMS19478.191ENSPPAG00000040083RBMS19878.191Pan_paniscus
ENSACIG00000021498RBMS19775.835ENSPPRG00000005040RBMS19675.835Panthera_pardus
ENSACIG00000021498RBMS19477.394ENSPTIG00000021240RBMS19576.487Panthera_tigris_altaica
ENSACIG00000021498RBMS19776.607ENSPTRG00000052304RBMS19878.191Pan_troglodytes
ENSACIG00000021498RBMS19773.711ENSPTRG00000039358-9775.266Pan_troglodytes
ENSACIG00000021498RBMS19776.350ENSPANG00000001383RBMS19878.191Papio_anubis
ENSACIG00000021498RBMS19775.654ENSPKIG00000012818rbms1a9775.654Paramormyrops_kingsleyae
ENSACIG00000021498RBMS19479.679ENSPKIG00000001498rbms1a9478.610Paramormyrops_kingsleyae
ENSACIG00000021498RBMS19678.796ENSPSIG00000010240RBMS19678.149Pelodiscus_sinensis
ENSACIG00000021498RBMS18763.663ENSPMGG00000004341rbms1a9063.663Periophthalmus_magnuspinnatus
ENSACIG00000021498RBMS18584.821ENSPMGG00000006310RBMS19679.656Periophthalmus_magnuspinnatus
ENSACIG00000021498RBMS19775.321ENSPEMG00000009449Rbms19577.394Peromyscus_maniculatus_bairdii
ENSACIG00000021498RBMS19976.119ENSPCIG00000018405RBMS19976.119Phascolarctos_cinereus
ENSACIG00000021498RBMS19166.667ENSPFOG00000016116rbms1a8967.442Poecilia_formosa
ENSACIG00000021498RBMS19786.269ENSPFOG00000017483RBMS19886.269Poecilia_formosa
ENSACIG00000021498RBMS19784.456ENSPLAG00000000920RBMS19886.528Poecilia_latipinna
ENSACIG00000021498RBMS19166.667ENSPLAG00000013864rbms1a8967.442Poecilia_latipinna
ENSACIG00000021498RBMS19166.667ENSPMEG00000016185rbms1a8967.442Poecilia_mexicana
ENSACIG00000021498RBMS19786.269ENSPMEG00000015838RBMS19886.269Poecilia_mexicana
ENSACIG00000021498RBMS19786.528ENSPREG00000008146RBMS19886.528Poecilia_reticulata
ENSACIG00000021498RBMS19166.667ENSPREG00000020161rbms1a8967.442Poecilia_reticulata
ENSACIG00000021498RBMS19773.333ENSPPYG00000012879-9673.333Pongo_abelii
ENSACIG00000021498RBMS19771.722ENSPCAG00000009673RBMS19671.722Procavia_capensis
ENSACIG00000021498RBMS19775.835ENSPCOG00000027294RBMS19675.835Propithecus_coquereli
ENSACIG00000021498RBMS19467.287ENSPVAG00000010429RBMS19666.067Pteropus_vampyrus
ENSACIG00000021498RBMS19793.455ENSPNYG00000002643RBMS19793.455Pundamilia_nyererei
ENSACIG00000021498RBMS19482.842ENSPNAG00000023479RBMS18883.095Pygocentrus_nattereri
ENSACIG00000021498RBMS18874.138ENSPNAG00000010225rbms1a8874.138Pygocentrus_nattereri
ENSACIG00000021498RBMS19675.844ENSRNOG00000008482Rbms19575.844Rattus_norvegicus
ENSACIG00000021498RBMS19776.350ENSRBIG00000044262RBMS19877.719Rhinopithecus_bieti
ENSACIG00000021498RBMS19776.350ENSRROG00000043108RBMS19878.191Rhinopithecus_roxellana
ENSACIG00000021498RBMS19476.440ENSSBOG00000034705RBMS19876.440Saimiri_boliviensis_boliviensis
ENSACIG00000021498RBMS19478.989ENSSHAG00000012271RBMS110074.203Sarcophilus_harrisii
ENSACIG00000021498RBMS18876.724ENSSFOG00015014493rbms1a9576.791Scleropages_formosus
ENSACIG00000021498RBMS19581.167ENSSFOG00015022929rbms19581.167Scleropages_formosus
ENSACIG00000021498RBMS18766.860ENSSMAG00000012722rbms1a9566.860Scophthalmus_maximus
ENSACIG00000021498RBMS19984.750ENSSMAG00000012152RBMS19489.112Scophthalmus_maximus
ENSACIG00000021498RBMS19790.933ENSSDUG00000018803RBMS19890.933Seriola_dumerili
ENSACIG00000021498RBMS19166.944ENSSDUG00000020602rbms1a9567.733Seriola_dumerili
ENSACIG00000021498RBMS19166.944ENSSLDG00000009495rbms1a8967.733Seriola_lalandi_dorsalis
ENSACIG00000021498RBMS19791.192ENSSLDG00000016556RBMS19891.192Seriola_lalandi_dorsalis
ENSACIG00000021498RBMS19754.639ENSSARG00000011085RBMS19654.639Sorex_araneus
ENSACIG00000021498RBMS18880.114ENSSPUG00000017163RBMS19479.887Sphenodon_punctatus
ENSACIG00000021498RBMS19166.944ENSSPAG00000005371rbms1a8967.733Stegastes_partitus
ENSACIG00000021498RBMS19791.969ENSSPAG00000000059RBMS19891.969Stegastes_partitus
ENSACIG00000021498RBMS18877.557ENSSSCG00000015888RBMS19377.807Sus_scrofa
ENSACIG00000021498RBMS19479.521ENSTGUG00000006606RBMS19677.635Taeniopygia_guttata
ENSACIG00000021498RBMS18986.286ENSTRUG00000005466-10080.353Takifugu_rubripes
ENSACIG00000021498RBMS18666.667ENSTRUG00000017155rbms1a8966.570Takifugu_rubripes
ENSACIG00000021498RBMS19063.483ENSTNIG00000009477rbms1a10063.385Tetraodon_nigroviridis
ENSACIG00000021498RBMS19484.140ENSTNIG00000016496RBMS19786.782Tetraodon_nigroviridis
ENSACIG00000021498RBMS19469.947ENSTBEG00000016156RBMS19969.947Tupaia_belangeri
ENSACIG00000021498RBMS19477.660ENSTTRG00000011058RBMS19977.660Tursiops_truncatus
ENSACIG00000021498RBMS19775.773ENSUAMG00000022331RBMS19675.773Ursus_americanus
ENSACIG00000021498RBMS19477.128ENSUMAG00000008605RBMS19777.128Ursus_maritimus
ENSACIG00000021498RBMS18880.627ENSVPAG00000002716RBMS19380.627Vicugna_pacos
ENSACIG00000021498RBMS19474.235ENSVVUG00000018682RBMS19577.054Vulpes_vulpes
ENSACIG00000021498RBMS19672.063ENSXETG00000016204rbms110071.540Xenopus_tropicalis
ENSACIG00000021498RBMS19163.333ENSXCOG00000001659rbms1a8963.953Xiphophorus_couchianus
ENSACIG00000021498RBMS18886.819ENSXCOG00000000211RBMS19586.819Xiphophorus_couchianus
ENSACIG00000021498RBMS19166.667ENSXMAG00000001802rbms1a8967.442Xiphophorus_maculatus
ENSACIG00000021498RBMS19785.492ENSXMAG00000011405RBMS19885.492Xiphophorus_maculatus

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