EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000021512 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171482
Alias: -
Full Name: zgc:171482
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 14967 bases
Position: chrCCOE01000564.1:2184164-2199130
Accession: ZDB-GENE-080204-84
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000027755	zf-met	PF12874.7	6.5e-15	1	2
ENSACIP00000027755	zf-met	PF12874.7	6.5e-15	2	2
ENSACIP00000027755	zf-C2H2_jaz	PF12171.8	2.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000028485	-	405	-	ENSACIP00000027755	134 (aa)	-	-

Gene Model

Click here to download ENSACIG00000021512's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000021512's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000021512	zgc:171482	95	68.504	ENSACIG00000009080	zmat4a	72	68.504
ENSACIG00000021512	zgc:171482	82	50.000	ENSACIG00000024439	znf346	70	52.525

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000021512	zgc:171482	87	99.145	ENSAPOG00000019970	zgc:171482	79	99.145	Acanthochromis_polyacanthus
ENSACIG00000021512	zgc:171482	87	99.145	ENSAOCG00000000751	zgc:171482	86	99.145	Amphiprion_ocellaris
ENSACIG00000021512	zgc:171482	87	99.145	ENSAPEG00000014154	zgc:171482	84	99.145	Amphiprion_percula
ENSACIG00000021512	zgc:171482	86	98.261	ENSATEG00000001371	zgc:171482	79	95.082	Anabas_testudineus
ENSACIG00000021512	zgc:171482	87	98.291	ENSACLG00000010511	zgc:171482	81	98.291	Astatotilapia_calliptera
ENSACIG00000021512	zgc:171482	87	93.162	ENSAMXG00000002299	zgc:171482	89	93.162	Astyanax_mexicanus
ENSACIG00000021512	zgc:171482	90	93.333	ENSCSEG00000006509	zgc:171482	78	93.333	Cynoglossus_semilaevis
ENSACIG00000021512	zgc:171482	97	91.538	ENSCVAG00000013606	zgc:171482	80	91.538	Cyprinodon_variegatus
ENSACIG00000021512	zgc:171482	98	85.075	ENSDARG00000074415	zgc:171482	100	85.075	Danio_rerio
ENSACIG00000021512	zgc:171482	87	94.872	ENSELUG00000021817	zgc:171482	84	94.872	Esox_lucius
ENSACIG00000021512	zgc:171482	87	72.650	ENSELUG00000017517	-	60	84.444	Esox_lucius
ENSACIG00000021512	zgc:171482	90	96.667	ENSFHEG00000002233	zgc:171482	86	96.667	Fundulus_heteroclitus
ENSACIG00000021512	zgc:171482	87	95.726	ENSGMOG00000010508	zgc:171482	79	95.726	Gadus_morhua
ENSACIG00000021512	zgc:171482	90	98.333	ENSGAFG00000009398	zgc:171482	78	98.333	Gambusia_affinis
ENSACIG00000021512	zgc:171482	90	96.667	ENSGACG00000007680	zgc:171482	80	96.667	Gasterosteus_aculeatus
ENSACIG00000021512	zgc:171482	87	98.291	ENSHBUG00000023289	zgc:171482	88	98.291	Haplochromis_burtoni
ENSACIG00000021512	zgc:171482	90	90.909	ENSHCOG00000018086	zgc:171482	90	90.909	Hippocampus_comes
ENSACIG00000021512	zgc:171482	87	94.872	ENSIPUG00000000361	zgc:171482	85	94.872	Ictalurus_punctatus
ENSACIG00000021512	zgc:171482	87	98.291	ENSKMAG00000005077	zgc:171482	68	98.291	Kryptolebias_marmoratus
ENSACIG00000021512	zgc:171482	90	96.667	ENSLBEG00000023823	zgc:171482	86	96.667	Labrus_bergylta
ENSACIG00000021512	zgc:171482	87	93.162	ENSLOCG00000008863	zgc:171482	77	93.162	Lepisosteus_oculatus
ENSACIG00000021512	zgc:171482	98	90.076	ENSMAMG00000001031	zgc:171482	75	96.667	Mastacembelus_armatus
ENSACIG00000021512	zgc:171482	87	92.308	ENSMZEG00005027721	zgc:171482	79	92.308	Maylandia_zebra
ENSACIG00000021512	zgc:171482	90	97.500	ENSMMOG00000010523	zgc:171482	92	97.500	Mola_mola
ENSACIG00000021512	zgc:171482	91	95.902	ENSMALG00000017883	zgc:171482	80	95.902	Monopterus_albus
ENSACIG00000021512	zgc:171482	87	98.276	ENSNBRG00000021035	zgc:171482	87	98.276	Neolamprologus_brichardi
ENSACIG00000021512	zgc:171482	87	98.291	ENSONIG00000018365	zgc:171482	78	98.291	Oreochromis_niloticus
ENSACIG00000021512	zgc:171482	87	99.145	ENSORLG00000007607	zgc:171482	82	99.145	Oryzias_latipes
ENSACIG00000021512	zgc:171482	87	98.291	ENSORLG00020003563	zgc:171482	82	98.291	Oryzias_latipes_hni
ENSACIG00000021512	zgc:171482	87	99.145	ENSORLG00015008552	zgc:171482	82	99.145	Oryzias_latipes_hsok
ENSACIG00000021512	zgc:171482	86	100.000	ENSOMEG00000003526	zgc:171482	81	100.000	Oryzias_melastigma
ENSACIG00000021512	zgc:171482	82	90.909	ENSPKIG00000016244	zgc:171482	82	88.696	Paramormyrops_kingsleyae
ENSACIG00000021512	zgc:171482	87	95.690	ENSPKIG00000015911	-	81	95.690	Paramormyrops_kingsleyae
ENSACIG00000021512	zgc:171482	87	96.667	ENSPMGG00000020230	zgc:171482	82	96.667	Periophthalmus_magnuspinnatus
ENSACIG00000021512	zgc:171482	90	97.500	ENSPFOG00000001974	zgc:171482	78	97.500	Poecilia_formosa
ENSACIG00000021512	zgc:171482	90	97.500	ENSPLAG00000003327	zgc:171482	79	97.500	Poecilia_latipinna
ENSACIG00000021512	zgc:171482	90	97.500	ENSPMEG00000004988	zgc:171482	72	97.500	Poecilia_mexicana
ENSACIG00000021512	zgc:171482	90	97.500	ENSPREG00000019241	zgc:171482	87	97.500	Poecilia_reticulata
ENSACIG00000021512	zgc:171482	87	98.291	ENSPNYG00000007773	zgc:171482	81	98.291	Pundamilia_nyererei
ENSACIG00000021512	zgc:171482	86	93.913	ENSPNAG00000007619	zgc:171482	79	93.162	Pygocentrus_nattereri
ENSACIG00000021512	zgc:171482	92	86.179	ENSSFOG00015016149	zgc:171482	98	86.179	Scleropages_formosus
ENSACIG00000021512	zgc:171482	87	90.517	ENSSFOG00015021238	zgc:171482	78	90.517	Scleropages_formosus
ENSACIG00000021512	zgc:171482	87	99.138	ENSSMAG00000002715	zgc:171482	74	99.138	Scophthalmus_maximus
ENSACIG00000021512	zgc:171482	90	98.333	ENSSDUG00000008773	zgc:171482	85	98.333	Seriola_dumerili
ENSACIG00000021512	zgc:171482	90	98.333	ENSSLDG00000019510	zgc:171482	85	98.333	Seriola_lalandi_dorsalis
ENSACIG00000021512	zgc:171482	87	100.000	ENSSPAG00000013724	zgc:171482	93	100.000	Stegastes_partitus
ENSACIG00000021512	zgc:171482	86	97.391	ENSTRUG00000005705	zgc:171482	68	97.391	Takifugu_rubripes
ENSACIG00000021512	zgc:171482	86	76.522	ENSTNIG00000008679	zgc:171482	80	76.522	Tetraodon_nigroviridis
ENSACIG00000021512	zgc:171482	73	91.111	ENSXETG00000013525	zmat4	76	91.111	Xenopus_tropicalis
ENSACIG00000021512	zgc:171482	90	87.603	ENSXMAG00000002641	zgc:171482	78	87.603	Xiphophorus_maculatus