EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSACIG00000021550 (Gene tree)
Gene ID
-
Gene Symbol
smarca4a
Alias
brahma-related gene 1|brg1|smarca2|smarca4|wu:fb51a08|yng|young
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4a
Gene Type
protein_coding
Species
Amphilophus_citrinellus
Status
putative
Strand
Plus strand
Length
12132 bases
Position
chrCCOE01000097.1:712286-724417
Accession
ZDB-GENE-030605-1
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACIP00000027880ResIIIPF04851.155.3e-0911
ENSACIP00000027880BRKPF07533.166.1e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACIT00000028616-4899-ENSACIP000000278801632 (aa)--
Gene Model
Click here to download ENSACIG00000021550's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000021550's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSACIG00000021550smarca4a9484.635ENSACIG00000003035-9785.087
ENSACIG00000021550smarca4a9870.434ENSACIG00000015607SMARCA29370.995
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACIG00000021550smarca4a9887.284ENSG00000127616SMARCA499100.000Homo_sapiens
ENSACIG00000021550smarca4a9484.606ENSAPOG00000004542SMARCA49984.900Acanthochromis_polyacanthus
ENSACIG00000021550smarca4a7694.169ENSAPOG00000003509smarca4a9994.169Acanthochromis_polyacanthus
ENSACIG00000021550smarca4a9882.957ENSAMEG00000010868SMARCA49883.644Ailuropoda_melanoleuca
ENSACIG00000021550smarca4a8993.526ENSAOCG00000019167smarca4a10093.526Amphiprion_ocellaris
ENSACIG00000021550smarca4a9386.021ENSAOCG00000009450-9786.671Amphiprion_ocellaris
ENSACIG00000021550smarca4a8993.595ENSAPEG00000015559smarca4a10093.595Amphiprion_percula
ENSACIG00000021550smarca4a9884.407ENSAPEG00000023108-9883.261Amphiprion_percula
ENSACIG00000021550smarca4a9996.547ENSATEG00000011524smarca4a9996.547Anabas_testudineus
ENSACIG00000021550smarca4a9885.321ENSATEG00000001094-9885.496Anabas_testudineus
ENSACIG00000021550smarca4a9987.103ENSANAG00000036991SMARCA49784.410Aotus_nancymaae
ENSACIG00000021550smarca4a10095.258ENSACLG00000000163smarca4a9996.734Astatotilapia_calliptera
ENSACIG00000021550smarca4a9485.777ENSACLG00000008638-9884.258Astatotilapia_calliptera
ENSACIG00000021550smarca4a9786.822ENSAMXG00000021023smarca4a9887.058Astyanax_mexicanus
ENSACIG00000021550smarca4a9387.492ENSAMXG00000011238-9487.112Astyanax_mexicanus
ENSACIG00000021550smarca4a9887.787ENSBTAG00000019220SMARCA49587.894Bos_taurus
ENSACIG00000021550smarca4a9883.215ENSCJAG00000005936SMARCA49783.714Callithrix_jacchus
ENSACIG00000021550smarca4a9887.107ENSCAFG00000017584SMARCA49787.617Canis_familiaris
ENSACIG00000021550smarca4a9886.065ENSCAFG00020024620SMARCA49687.617Canis_lupus_dingo
ENSACIG00000021550smarca4a9883.963ENSCHIG00000015318SMARCA49584.051Capra_hircus
ENSACIG00000021550smarca4a9887.539ENSTSYG00000012966SMARCA49787.869Carlito_syrichta
ENSACIG00000021550smarca4a9381.562ENSCAPG00000015932SMARCA49490.584Cavia_aperea
ENSACIG00000021550smarca4a9987.225ENSCPOG00000015549SMARCA49787.492Cavia_porcellus
ENSACIG00000021550smarca4a9883.917ENSCCAG00000031660SMARCA49684.515Cebus_capucinus
ENSACIG00000021550smarca4a9887.230ENSCATG00000029530SMARCA49787.680Cercocebus_atys
ENSACIG00000021550smarca4a9887.469ENSCLAG00000011946SMARCA49787.925Chinchilla_lanigera
ENSACIG00000021550smarca4a9887.091ENSCPBG00000009994SMARCA49986.967Chrysemys_picta_bellii
ENSACIG00000021550smarca4a9887.168ENSCANG00000036013SMARCA49787.680Colobus_angolensis_palliatus
ENSACIG00000021550smarca4a9887.107ENSCGRG00001016732Smarca49787.617Cricetulus_griseus_chok1gshd
ENSACIG00000021550smarca4a9887.107ENSCGRG00000017242Smarca49787.617Cricetulus_griseus_crigri
ENSACIG00000021550smarca4a9594.968ENSCSEG00000014771smarca4a9995.087Cynoglossus_semilaevis
ENSACIG00000021550smarca4a9883.354ENSCVAG00000003018-9884.520Cyprinodon_variegatus
ENSACIG00000021550smarca4a9994.390ENSCVAG00000006979smarca4a9994.331Cyprinodon_variegatus
ENSACIG00000021550smarca4a9184.887ENSDARG00000104339SMARCA49484.806Danio_rerio
ENSACIG00000021550smarca4a9791.103ENSDARG00000077226smarca4a9791.280Danio_rerio
ENSACIG00000021550smarca4a9979.054ENSDNOG00000048847SMARCA49090.337Dasypus_novemcinctus
ENSACIG00000021550smarca4a8481.936ENSDORG00000002544Smarca49280.912Dipodomys_ordii
ENSACIG00000021550smarca4a9376.594ENSETEG00000013361SMARCA49475.829Echinops_telfairi
ENSACIG00000021550smarca4a9886.983ENSEASG00005006167SMARCA49687.305Equus_asinus_asinus
ENSACIG00000021550smarca4a9887.045ENSECAG00000008334SMARCA49887.367Equus_caballus
ENSACIG00000021550smarca4a9890.708ENSELUG00000010247smarca4a9790.025Esox_lucius
ENSACIG00000021550smarca4a9879.960ENSELUG00000023232-9779.278Esox_lucius
ENSACIG00000021550smarca4a9887.069ENSFCAG00000004894SMARCA49787.516Felis_catus
ENSACIG00000021550smarca4a9187.052ENSFDAG00000012237SMARCA49787.052Fukomys_damarensis
ENSACIG00000021550smarca4a9885.749ENSFHEG00000007902-9984.508Fundulus_heteroclitus
ENSACIG00000021550smarca4a9593.172ENSFHEG00000010182smarca4a9993.108Fundulus_heteroclitus
ENSACIG00000021550smarca4a8693.220ENSGMOG00000002649smarca4a9291.111Gadus_morhua
ENSACIG00000021550smarca4a9081.255ENSGMOG00000005756-9080.637Gadus_morhua
ENSACIG00000021550smarca4a7386.307ENSGALG00000047145SMARCA410086.141Gallus_gallus
ENSACIG00000021550smarca4a9882.316ENSGAFG00000008827-9882.287Gambusia_affinis
ENSACIG00000021550smarca4a8992.696ENSGAFG00000014900smarca4a9993.648Gambusia_affinis
ENSACIG00000021550smarca4a9880.349ENSGACG00000016033-9979.688Gasterosteus_aculeatus
ENSACIG00000021550smarca4a9693.849ENSGACG00000006691smarca4a9993.808Gasterosteus_aculeatus
ENSACIG00000021550smarca4a9887.314ENSGAGG00000016757SMARCA49987.191Gopherus_agassizii
ENSACIG00000021550smarca4a9887.230ENSGGOG00000009882SMARCA49787.680Gorilla_gorilla
ENSACIG00000021550smarca4a9997.600ENSHBUG00000021172smarca4a9997.597Haplochromis_burtoni
ENSACIG00000021550smarca4a9885.906ENSHBUG00000005447-9884.581Haplochromis_burtoni
ENSACIG00000021550smarca4a9886.486ENSHGLG00000010519SMARCA49786.924Heterocephalus_glaber_female
ENSACIG00000021550smarca4a9886.322ENSHGLG00100013774SMARCA49786.508Heterocephalus_glaber_male
ENSACIG00000021550smarca4a9495.026ENSHCOG00000009510smarca4a9695.090Hippocampus_comes
ENSACIG00000021550smarca4a9685.678ENSIPUG00000016346-9485.668Ictalurus_punctatus
ENSACIG00000021550smarca4a9890.588ENSIPUG00000006107smarca4a9990.526Ictalurus_punctatus
ENSACIG00000021550smarca4a9886.983ENSSTOG00000007939SMARCA49787.430Ictidomys_tridecemlineatus
ENSACIG00000021550smarca4a9885.429ENSJJAG00000012877Smarca49785.049Jaculus_jaculus
ENSACIG00000021550smarca4a9894.469ENSKMAG00000011931smarca4a9994.220Kryptolebias_marmoratus
ENSACIG00000021550smarca4a9486.072ENSKMAG00000019518-9886.808Kryptolebias_marmoratus
ENSACIG00000021550smarca4a9972.412ENSLBEG00000020655-9882.243Labrus_bergylta
ENSACIG00000021550smarca4a9491.408ENSLBEG00000017383smarca4a9790.792Labrus_bergylta
ENSACIG00000021550smarca4a5280.657ENSLACG00000015309SMARCA410081.594Latimeria_chalumnae
ENSACIG00000021550smarca4a9886.733ENSLOCG00000007820smarca4a9986.361Lepisosteus_oculatus
ENSACIG00000021550smarca4a9887.007ENSLAFG00000001433SMARCA49787.391Loxodonta_africana
ENSACIG00000021550smarca4a9886.188ENSMFAG00000032146SMARCA49687.680Macaca_fascicularis
ENSACIG00000021550smarca4a9986.245ENSMMUG00000012042SMARCA49591.879Macaca_mulatta
ENSACIG00000021550smarca4a9887.214ENSMNEG00000028512SMARCA49787.664Macaca_nemestrina
ENSACIG00000021550smarca4a9887.131ENSMLEG00000034976SMARCA49787.453Mandrillus_leucophaeus
ENSACIG00000021550smarca4a9996.788ENSMAMG00000009256smarca4a9996.788Mastacembelus_armatus
ENSACIG00000021550smarca4a9884.453ENSMAMG00000002841-9887.041Mastacembelus_armatus
ENSACIG00000021550smarca4a9997.475ENSMZEG00005003889smarca4a9997.475Maylandia_zebra
ENSACIG00000021550smarca4a9486.375ENSMZEG00005023861-9882.971Maylandia_zebra
ENSACIG00000021550smarca4a9886.884ENSMAUG00000020731Smarca49787.328Mesocricetus_auratus
ENSACIG00000021550smarca4a9887.007ENSMICG00000009806SMARCA49787.453Microcebus_murinus
ENSACIG00000021550smarca4a9886.823ENSMOCG00000022209Smarca49787.328Microtus_ochrogaster
ENSACIG00000021550smarca4a9882.393ENSMMOG00000008466-9882.067Mola_mola
ENSACIG00000021550smarca4a9694.233ENSMMOG00000007571smarca4a10094.233Mola_mola
ENSACIG00000021550smarca4a9886.061ENSMODG00000006287SMARCA49985.515Monodelphis_domestica
ENSACIG00000021550smarca4a9996.114ENSMALG00000003388smarca4a9996.114Monopterus_albus
ENSACIG00000021550smarca4a8983.951ENSMALG00000021534-9683.701Monopterus_albus
ENSACIG00000021550smarca4a9887.099MGP_CAROLIEiJ_G0031879Smarca410085.816Mus_caroli
ENSACIG00000021550smarca4a9887.099ENSMUSG00000032187Smarca49985.816Mus_musculus
ENSACIG00000021550smarca4a9887.608MGP_PahariEiJ_G0014745Smarca410086.065Mus_pahari
ENSACIG00000021550smarca4a9887.099MGP_SPRETEiJ_G0033003Smarca410085.816Mus_spretus
ENSACIG00000021550smarca4a9887.107ENSMPUG00000005711SMARCA49787.555Mustela_putorius_furo
ENSACIG00000021550smarca4a9887.539ENSMLUG00000004491-9787.297Myotis_lucifugus
ENSACIG00000021550smarca4a9887.384ENSNGAG00000021852Smarca49787.461Nannospalax_galili
ENSACIG00000021550smarca4a9793.056ENSNBRG00000011457smarca4a9993.304Neolamprologus_brichardi
ENSACIG00000021550smarca4a8984.225ENSNBRG00000018865-9984.441Neolamprologus_brichardi
ENSACIG00000021550smarca4a9584.709ENSNLEG00000012389SMARCA49484.596Nomascus_leucogenys
ENSACIG00000021550smarca4a7996.552ENSOPRG00000000885-7896.552Ochotona_princeps
ENSACIG00000021550smarca4a9885.231ENSODEG00000017127SMARCA49784.654Octodon_degus
ENSACIG00000021550smarca4a9885.967ENSONIG00000018040-9982.695Oreochromis_niloticus
ENSACIG00000021550smarca4a9997.659ENSONIG00000008196smarca4a9997.659Oreochromis_niloticus
ENSACIG00000021550smarca4a9881.091ENSOCUG00000001787SMARCA49880.967Oryctolagus_cuniculus
ENSACIG00000021550smarca4a9894.096ENSORLG00000015452smarca4a9993.599Oryzias_latipes
ENSACIG00000021550smarca4a9585.164ENSORLG00000003955-9882.018Oryzias_latipes
ENSACIG00000021550smarca4a9893.723ENSORLG00020004611smarca4a9993.599Oryzias_latipes_hni
ENSACIG00000021550smarca4a9585.110ENSORLG00020009728-9882.305Oryzias_latipes_hni
ENSACIG00000021550smarca4a9893.723ENSORLG00015016560smarca4a9993.599Oryzias_latipes_hsok
ENSACIG00000021550smarca4a9885.043ENSORLG00015007739-9585.162Oryzias_latipes_hsok
ENSACIG00000021550smarca4a9894.832ENSOMEG00000007486smarca4a9994.770Oryzias_melastigma
ENSACIG00000021550smarca4a9585.237ENSOMEG00000016626-9585.073Oryzias_melastigma
ENSACIG00000021550smarca4a8985.938ENSOGAG00000016148SMARCA410085.112Otolemur_garnettii
ENSACIG00000021550smarca4a9887.237ENSOARG00000017454SMARCA49687.830Ovis_aries
ENSACIG00000021550smarca4a9887.230ENSPPAG00000043191SMARCA49787.680Pan_paniscus
ENSACIG00000021550smarca4a9887.069ENSPPRG00000000064SMARCA49787.516Panthera_pardus
ENSACIG00000021550smarca4a7786.360ENSPTIG00000017447SMARCA49781.334Panthera_tigris_altaica
ENSACIG00000021550smarca4a9887.230ENSPTRG00000010488SMARCA49787.680Pan_troglodytes
ENSACIG00000021550smarca4a9886.294ENSPANG00000011042SMARCA49687.790Papio_anubis
ENSACIG00000021550smarca4a9890.081ENSPKIG00000007770SMARCA49990.136Paramormyrops_kingsleyae
ENSACIG00000021550smarca4a9886.567ENSPKIG00000010087-9787.197Paramormyrops_kingsleyae
ENSACIG00000021550smarca4a9881.901ENSPSIG00000005547SMARCA49981.481Pelodiscus_sinensis
ENSACIG00000021550smarca4a9886.884ENSPEMG00000020389Smarca49787.391Peromyscus_maniculatus_bairdii
ENSACIG00000021550smarca4a9887.701ENSPCIG00000017138SMARCA49987.701Phascolarctos_cinereus
ENSACIG00000021550smarca4a9884.951ENSPFOG00000012930-9985.064Poecilia_formosa
ENSACIG00000021550smarca4a9892.000ENSPFOG00000007892smarca4a9992.800Poecilia_formosa
ENSACIG00000021550smarca4a9885.954ENSPLAG00000018616-9886.265Poecilia_latipinna
ENSACIG00000021550smarca4a9891.938ENSPLAG00000014294smarca4a9992.738Poecilia_latipinna
ENSACIG00000021550smarca4a9486.303ENSPMEG00000008929-9884.525Poecilia_mexicana
ENSACIG00000021550smarca4a9492.588ENSPMEG00000003725smarca4a9693.154Poecilia_mexicana
ENSACIG00000021550smarca4a9485.435ENSPREG00000014823-9685.174Poecilia_reticulata
ENSACIG00000021550smarca4a9891.656ENSPREG00000014608smarca4a9992.209Poecilia_reticulata
ENSACIG00000021550smarca4a9885.248ENSPPYG00000009568SMARCA49785.355Pongo_abelii
ENSACIG00000021550smarca4a7987.417ENSPCAG00000014054SMARCA47592.969Procavia_capensis
ENSACIG00000021550smarca4a9886.946ENSPCOG00000023011SMARCA49787.391Propithecus_coquereli
ENSACIG00000021550smarca4a9482.765ENSPVAG00000007787SMARCA49381.295Pteropus_vampyrus
ENSACIG00000021550smarca4a9796.794ENSPNYG00000000717smarca4a9996.794Pundamilia_nyererei
ENSACIG00000021550smarca4a9484.571ENSPNYG00000023995-9884.764Pundamilia_nyererei
ENSACIG00000021550smarca4a9487.572ENSPNAG00000006636-9387.684Pygocentrus_nattereri
ENSACIG00000021550smarca4a9785.272ENSPNAG00000024136smarca4a9787.152Pygocentrus_nattereri
ENSACIG00000021550smarca4a9887.160ENSRNOG00000009271Smarca49787.672Rattus_norvegicus
ENSACIG00000021550smarca4a9886.188ENSRBIG00000038696SMARCA49687.680Rhinopithecus_bieti
ENSACIG00000021550smarca4a9887.230ENSRROG00000045509SMARCA49787.680Rhinopithecus_roxellana
ENSACIG00000021550smarca4a9987.324ENSSBOG00000026896SMARCA49690.153Saimiri_boliviensis_boliviensis
ENSACIG00000021550smarca4a9887.639ENSSHAG00000001642SMARCA49987.639Sarcophilus_harrisii
ENSACIG00000021550smarca4a9584.895ENSSFOG00015009921-9491.139Scleropages_formosus
ENSACIG00000021550smarca4a9891.326ENSSFOG00015013823smarca49991.140Scleropages_formosus
ENSACIG00000021550smarca4a9995.110ENSSMAG00000003200smarca4a9995.110Scophthalmus_maximus
ENSACIG00000021550smarca4a9883.040ENSSMAG00000014082-9982.968Scophthalmus_maximus
ENSACIG00000021550smarca4a9891.095ENSSDUG00000017298smarca4a9991.528Seriola_dumerili
ENSACIG00000021550smarca4a9886.245ENSSDUG00000005388-9586.243Seriola_dumerili
ENSACIG00000021550smarca4a9486.018ENSSLDG00000023663-9787.436Seriola_lalandi_dorsalis
ENSACIG00000021550smarca4a9996.820ENSSLDG00000024486smarca4a9996.820Seriola_lalandi_dorsalis
ENSACIG00000021550smarca4a6196.894ENSSARG00000013477SMARCA48196.894Sorex_araneus
ENSACIG00000021550smarca4a9484.036ENSSPUG00000004558SMARCA49883.653Sphenodon_punctatus
ENSACIG00000021550smarca4a9884.315ENSSPAG00000012533-9982.109Stegastes_partitus
ENSACIG00000021550smarca4a9996.269ENSSPAG00000004248smarca4a9996.269Stegastes_partitus
ENSACIG00000021550smarca4a9887.315ENSSSCG00000013629SMARCA49787.578Sus_scrofa
ENSACIG00000021550smarca4a5183.630ENSTGUG00000015488-9883.493Taeniopygia_guttata
ENSACIG00000021550smarca4a8988.393ENSTRUG00000004885smarca4a10088.462Takifugu_rubripes
ENSACIG00000021550smarca4a9484.537ENSTRUG00000001378SMARCA49885.176Takifugu_rubripes
ENSACIG00000021550smarca4a9883.138ENSTNIG00000004536SMARCA49983.754Tetraodon_nigroviridis
ENSACIG00000021550smarca4a7392.883ENSTNIG00000004859-10092.883Tetraodon_nigroviridis
ENSACIG00000021550smarca4a9884.504ENSTTRG00000009519SMARCA49784.049Tursiops_truncatus
ENSACIG00000021550smarca4a9887.168ENSUAMG00000014661SMARCA49787.617Ursus_americanus
ENSACIG00000021550smarca4a9583.494ENSUMAG00000022005SMARCA49890.826Ursus_maritimus
ENSACIG00000021550smarca4a9886.065ENSVVUG00000017820SMARCA49487.617Vulpes_vulpes
ENSACIG00000021550smarca4a9882.603ENSXETG00000009355smarca49982.788Xenopus_tropicalis
ENSACIG00000021550smarca4a9882.660ENSXCOG00000013494-9883.717Xiphophorus_couchianus
ENSACIG00000021550smarca4a9892.289ENSXMAG00000006321smarca4a9992.597Xiphophorus_maculatus
ENSACIG00000021550smarca4a9885.235ENSXMAG00000007030-9985.470Xiphophorus_maculatus

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