EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000021716 (Gene tree)
Gene ID: -
Gene Symbol: ern1
Alias: sb:eu1005|zgc:109932
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 20872 bases
Position: chrCCOE01001063.1:122261-143132
Accession: ZDB-GENE-050522-431
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000028064	Ribonuc_2-5A	PF06479.12	1.1e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000028804	-	3267	-	ENSACIP00000028064	1088 (aa)	-	-

Gene Model

Click here to download ENSACIG00000021716's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000021716's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000021716	ern1	86	55.310	ENSACIG00000015500	ern2	99	54.043

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000021716	ern1	98	90.205	ENSAPOG00000009999	ern1	99	89.706	Acanthochromis_polyacanthus
ENSACIG00000021716	ern1	99	90.349	ENSAOCG00000012309	ern1	99	90.349	Amphiprion_ocellaris
ENSACIG00000021716	ern1	99	89.890	ENSAPEG00000011263	ern1	98	94.270	Amphiprion_percula
ENSACIG00000021716	ern1	100	88.342	ENSATEG00000024468	ern1	100	88.342	Anabas_testudineus
ENSACIG00000021716	ern1	100	94.761	ENSACLG00000027919	ern1	100	94.761	Astatotilapia_calliptera
ENSACIG00000021716	ern1	96	80.000	ENSAMXG00000000944	ern1	99	80.000	Astyanax_mexicanus
ENSACIG00000021716	ern1	94	87.683	ENSCSEG00000014500	ern1	99	87.977	Cynoglossus_semilaevis
ENSACIG00000021716	ern1	99	84.147	ENSCVAG00000002988	ern1	98	87.524	Cyprinodon_variegatus
ENSACIG00000021716	ern1	90	81.237	ENSDARG00000013997	ern1	100	82.195	Danio_rerio
ENSACIG00000021716	ern1	89	81.772	ENSELUG00000005957	ern1	94	81.772	Esox_lucius
ENSACIG00000021716	ern1	93	88.177	ENSFHEG00000005578	ern1	95	88.177	Fundulus_heteroclitus
ENSACIG00000021716	ern1	86	87.128	ENSGMOG00000011232	ern1	100	87.128	Gadus_morhua
ENSACIG00000021716	ern1	93	89.625	ENSGAFG00000020231	ern1	94	89.625	Gambusia_affinis
ENSACIG00000021716	ern1	87	90.996	ENSGACG00000011700	ern1	98	90.996	Gasterosteus_aculeatus
ENSACIG00000021716	ern1	99	93.686	ENSHBUG00000012581	ern1	99	94.078	Haplochromis_burtoni
ENSACIG00000021716	ern1	99	84.030	ENSHCOG00000016199	ern1	99	84.381	Hippocampus_comes
ENSACIG00000021716	ern1	95	80.347	ENSIPUG00000011083	ern1	93	84.156	Ictalurus_punctatus
ENSACIG00000021716	ern1	100	85.321	ENSKMAG00000019499	ern1	100	85.321	Kryptolebias_marmoratus
ENSACIG00000021716	ern1	98	84.972	ENSLBEG00000025907	ern1	100	84.972	Labrus_bergylta
ENSACIG00000021716	ern1	100	87.843	ENSMAMG00000023439	ern1	100	87.843	Mastacembelus_armatus
ENSACIG00000021716	ern1	100	94.761	ENSMZEG00005003221	ern1	100	94.761	Maylandia_zebra
ENSACIG00000021716	ern1	90	90.564	ENSMMOG00000007650	ern1	97	90.564	Mola_mola
ENSACIG00000021716	ern1	99	86.484	ENSMALG00000017775	ern1	98	86.484	Monopterus_albus
ENSACIG00000021716	ern1	99	93.129	ENSNBRG00000002179	ern1	99	93.129	Neolamprologus_brichardi
ENSACIG00000021716	ern1	87	95.763	ENSONIG00000017169	ern1	98	95.763	Oreochromis_niloticus
ENSACIG00000021716	ern1	97	86.119	ENSORLG00000008940	ern1	99	86.038	Oryzias_latipes
ENSACIG00000021716	ern1	97	86.090	ENSORLG00020018387	ern1	99	86.090	Oryzias_latipes_hni
ENSACIG00000021716	ern1	97	86.213	ENSORLG00015007946	ern1	99	86.132	Oryzias_latipes_hsok
ENSACIG00000021716	ern1	98	86.330	ENSOMEG00000011741	ern1	99	86.330	Oryzias_melastigma
ENSACIG00000021716	ern1	89	81.520	ENSPKIG00000005593	ern1	98	81.520	Paramormyrops_kingsleyae
ENSACIG00000021716	ern1	100	83.410	ENSPMGG00000020442	ern1	99	85.196	Periophthalmus_magnuspinnatus
ENSACIG00000021716	ern1	96	87.204	ENSPFOG00000007378	ern1	98	87.204	Poecilia_formosa
ENSACIG00000021716	ern1	98	86.304	ENSPLAG00000014780	ern1	99	86.304	Poecilia_latipinna
ENSACIG00000021716	ern1	98	86.398	ENSPMEG00000016324	ern1	99	86.398	Poecilia_mexicana
ENSACIG00000021716	ern1	98	85.835	ENSPREG00000006286	ern1	99	85.835	Poecilia_reticulata
ENSACIG00000021716	ern1	100	94.669	ENSPNYG00000017929	ern1	100	94.669	Pundamilia_nyererei
ENSACIG00000021716	ern1	93	81.571	ENSPNAG00000029447	ern1	99	82.074	Pygocentrus_nattereri
ENSACIG00000021716	ern1	100	86.703	ENSSMAG00000015042	ern1	100	86.703	Scophthalmus_maximus
ENSACIG00000021716	ern1	100	90.146	ENSSDUG00000009098	ern1	100	90.146	Seriola_dumerili
ENSACIG00000021716	ern1	100	89.690	ENSSLDG00000023254	ern1	100	89.690	Seriola_lalandi_dorsalis
ENSACIG00000021716	ern1	99	89.788	ENSSPAG00000017539	ern1	99	89.821	Stegastes_partitus
ENSACIG00000021716	ern1	96	85.564	ENSTRUG00000001041	ern1	99	85.564	Takifugu_rubripes
ENSACIG00000021716	ern1	86	91.426	ENSTNIG00000017990	ern1	99	90.346	Tetraodon_nigroviridis
ENSACIG00000021716	ern1	91	90.457	ENSXCOG00000010330	ern1	97	90.457	Xiphophorus_couchianus
ENSACIG00000021716	ern1	98	86.023	ENSXMAG00000001310	ern1	99	86.023	Xiphophorus_maculatus