EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSACIG00000021744 (Gene tree)
Gene ID
-
Gene Symbol
pabpn1
Alias
fb19c03|wu:fb17e03|wu:fb18c06|wu:fb19c03|zgc:85979|zgc:92452
Full Name
poly(A) binding protein%2C nuclear 1
Gene Type
protein_coding
Species
Amphilophus_citrinellus
Status
putative
Strand
Minus strand
Length
12447 bases
Position
chrCCOE01000112.1:1468312-1480758
Accession
ZDB-GENE-040426-2401
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACIP00000028101RRM_1PF00076.221.3e-1711
ENSACIP00000028088RRM_1PF00076.225.2e-1411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACIT00000028843-531-ENSACIP00000028101176 (aa)--
ENSACIT00000028829-852-ENSACIP00000028088283 (aa)--
Gene Model
Click here to download ENSACIG00000021744's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000021744's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSACIG00000021744pabpn15137.363ENSACIG00000018502srsf2a5637.500
ENSACIG00000021744pabpn19058.385ENSACIG00000021400PABPN1L7959.211
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACIG00000021744pabpn19482.143ENSG00000100836PABPN19482.143Homo_sapiens
ENSACIG00000021744pabpn19482.143ENSG00000258643BCL2L2-PABPN16771.304Homo_sapiens
ENSACIG00000021744pabpn110098.295ENSAPOG00000016425pabpn110097.203Acanthochromis_polyacanthus
ENSACIG00000021744pabpn19482.143ENSAMEG00000007048BCL2L2-PABPN19583.889Ailuropoda_melanoleuca
ENSACIG00000021744pabpn110098.295ENSAOCG00000015805pabpn19496.833Amphiprion_ocellaris
ENSACIG00000021744pabpn110098.295ENSAPEG00000009623pabpn19496.833Amphiprion_percula
ENSACIG00000021744pabpn110098.864ENSATEG00000020531pabpn19497.285Anabas_testudineus
ENSACIG00000021744pabpn19483.333ENSACAG00000006185-7672.444Anolis_carolinensis
ENSACIG00000021744pabpn19482.143ENSANAG00000024513-8272.199Aotus_nancymaae
ENSACIG00000021744pabpn110099.648ENSACLG00000016374pabpn110099.648Astatotilapia_calliptera
ENSACIG00000021744pabpn110097.175ENSAMXG00000000452pabpn110097.175Astyanax_mexicanus
ENSACIG00000021744pabpn19480.952ENSBTAG00000053753-6683.051Bos_taurus
ENSACIG00000021744pabpn19473.653ENSBTAG00000050594-7678.500Bos_taurus
ENSACIG00000021744pabpn19482.143ENSBTAG00000006884PABPN18369.600Bos_taurus
ENSACIG00000021744pabpn17361.364WBGene00003904pabp-28349.462Caenorhabditis_elegans
ENSACIG00000021744pabpn19482.143ENSCJAG00000007960-7875.799Callithrix_jacchus
ENSACIG00000021744pabpn19480.357ENSCJAG00000004407-8480.357Callithrix_jacchus
ENSACIG00000021744pabpn19482.143ENSCAFG00000011482PABPN18170.400Canis_familiaris
ENSACIG00000021744pabpn19482.143ENSCAFG00020007298-8467.300Canis_lupus_dingo
ENSACIG00000021744pabpn19482.143ENSCAFG00020006651-8467.300Canis_lupus_dingo
ENSACIG00000021744pabpn19482.143ENSCHIG00000012184PABPN18467.300Capra_hircus
ENSACIG00000021744pabpn19482.143ENSTSYG00000033996BCL2L2-PABPN19482.143Carlito_syrichta
ENSACIG00000021744pabpn17882.014ENSCAPG00000009461-9682.963Cavia_aperea
ENSACIG00000021744pabpn19481.548ENSCPOG00000025574PABPN16777.404Cavia_porcellus
ENSACIG00000021744pabpn19482.143ENSCCAG00000033954BCL2L2-PABPN17875.799Cebus_capucinus
ENSACIG00000021744pabpn19482.143ENSCATG00000038536BCL2L2-PABPN17875.799Cercocebus_atys
ENSACIG00000021744pabpn18582.119ENSCLAG00000012423PABPN15682.119Chinchilla_lanigera
ENSACIG00000021744pabpn19480.952ENSCSAG00000016036PABPN18465.909Chlorocebus_sabaeus
ENSACIG00000021744pabpn19474.405ENSCHOG00000004798BCL2L2-PABPN18669.903Choloepus_hoffmanni
ENSACIG00000021744pabpn19483.929ENSCPBG00000026060-9483.929Chrysemys_picta_bellii
ENSACIG00000021744pabpn110067.232ENSCING00000012468-8064.804Ciona_intestinalis
ENSACIG00000021744pabpn110066.854ENSCSAVG00000002001-9361.677Ciona_savignyi
ENSACIG00000021744pabpn19482.143ENSCANG00000009750BCL2L2-PABPN19482.143Colobus_angolensis_palliatus
ENSACIG00000021744pabpn19470.482ENSCANG00000030980-8363.755Colobus_angolensis_palliatus
ENSACIG00000021744pabpn19481.548ENSCGRG00001019696Pabpn19481.548Cricetulus_griseus_chok1gshd
ENSACIG00000021744pabpn19481.548ENSCGRG00000011102Pabpn19389.333Cricetulus_griseus_crigri
ENSACIG00000021744pabpn110097.159ENSCSEG00000008774pabpn19595.475Cynoglossus_semilaevis
ENSACIG00000021744pabpn110090.541ENSCVAG00000003152pabpn110091.892Cyprinodon_variegatus
ENSACIG00000021744pabpn110097.727ENSDARG00000045373pabpn110096.313Danio_rerio
ENSACIG00000021744pabpn19555.689ENSDARG00000087996pabpn1l7267.521Danio_rerio
ENSACIG00000021744pabpn19482.143ENSDNOG00000023682PABPN18467.300Dasypus_novemcinctus
ENSACIG00000021744pabpn19480.952ENSDORG00000028966-8466.540Dipodomys_ordii
ENSACIG00000021744pabpn17482.707ENSDORG00000023928-8581.967Dipodomys_ordii
ENSACIG00000021744pabpn110062.712FBgn0005648Pabp29856.897Drosophila_melanogaster
ENSACIG00000021744pabpn110080.791ENSEBUG00000002322pabpn19670.925Eptatretus_burgeri
ENSACIG00000021744pabpn19482.143ENSEASG00005011716PABPN18567.300Equus_asinus_asinus
ENSACIG00000021744pabpn19381.325ENSECAG00000011652PABPN18569.020Equus_caballus
ENSACIG00000021744pabpn19479.167ENSEEUG00000012973-6680.000Erinaceus_europaeus
ENSACIG00000021744pabpn110096.045ENSELUG00000022654pabpn19593.363Esox_lucius
ENSACIG00000021744pabpn19482.143ENSFCAG00000031922PABPN18467.300Felis_catus
ENSACIG00000021744pabpn19482.143ENSFDAG00000018381BCL2L2-PABPN19482.143Fukomys_damarensis
ENSACIG00000021744pabpn19494.545ENSFHEG00000007215pabpn19494.570Fundulus_heteroclitus
ENSACIG00000021744pabpn110093.380ENSGMOG00000003922pabpn110093.728Gadus_morhua
ENSACIG00000021744pabpn19480.000ENSGALG00000052930-6078.469Gallus_gallus
ENSACIG00000021744pabpn110097.753ENSGAFG00000017099pabpn19495.964Gambusia_affinis
ENSACIG00000021744pabpn110095.804ENSGACG00000002167pabpn110095.804Gasterosteus_aculeatus
ENSACIG00000021744pabpn19466.867ENSGGOG00000039675-8963.445Gorilla_gorilla
ENSACIG00000021744pabpn19469.643ENSGGOG00000025919-9869.128Gorilla_gorilla
ENSACIG00000021744pabpn19482.143ENSGGOG00000022683-7875.799Gorilla_gorilla
ENSACIG00000021744pabpn1100100.000ENSHBUG00000019523pabpn19498.190Haplochromis_burtoni
ENSACIG00000021744pabpn19464.671ENSHGLG00000009842-9364.671Heterocephalus_glaber_female
ENSACIG00000021744pabpn19481.548ENSHGLG00000002927-9390.541Heterocephalus_glaber_female
ENSACIG00000021744pabpn19368.675ENSHGLG00000018588-7073.158Heterocephalus_glaber_female
ENSACIG00000021744pabpn19469.767ENSHGLG00100018935-9472.674Heterocephalus_glaber_male
ENSACIG00000021744pabpn19481.548ENSHGLG00100006673-9390.541Heterocephalus_glaber_male
ENSACIG00000021744pabpn19368.675ENSHGLG00100015565-8764.502Heterocephalus_glaber_male
ENSACIG00000021744pabpn110097.159ENSHCOG00000004655pabpn19596.833Hippocampus_comes
ENSACIG00000021744pabpn19492.727ENSIPUG00000000180-9488.235Ictalurus_punctatus
ENSACIG00000021744pabpn110096.591ENSIPUG00000008085PABPN19495.928Ictalurus_punctatus
ENSACIG00000021744pabpn19482.143ENSSTOG00000029847BCL2L2-PABPN19482.143Ictidomys_tridecemlineatus
ENSACIG00000021744pabpn19482.143ENSJJAG00000023507Gm205219482.143Jaculus_jaculus
ENSACIG00000021744pabpn110097.740ENSKMAG00000018748pabpn110096.167Kryptolebias_marmoratus
ENSACIG00000021744pabpn110098.864ENSLBEG00000027266pabpn110097.203Labrus_bergylta
ENSACIG00000021744pabpn18785.897ENSLACG00000000646pabpn18482.474Latimeria_chalumnae
ENSACIG00000021744pabpn110090.941ENSLOCG00000000796pabpn110091.289Lepisosteus_oculatus
ENSACIG00000021744pabpn110066.102ENSLOCG00000004694pabpn1l9265.347Lepisosteus_oculatus
ENSACIG00000021744pabpn18682.237ENSLAFG00000031227-10082.237Loxodonta_africana
ENSACIG00000021744pabpn18075.352ENSMFAG00000031355-9975.352Macaca_fascicularis
ENSACIG00000021744pabpn19482.143ENSMFAG00000032183BCL2L2-PABPN19482.143Macaca_fascicularis
ENSACIG00000021744pabpn19482.143ENSMMUG00000014747BCL2L2-PABPN110082.313Macaca_mulatta
ENSACIG00000021744pabpn18574.000ENSMMUG00000048382-8658.846Macaca_mulatta
ENSACIG00000021744pabpn19468.639ENSMNEG00000035750-9975.352Macaca_nemestrina
ENSACIG00000021744pabpn19482.143ENSMNEG00000045065BCL2L2-PABPN17875.799Macaca_nemestrina
ENSACIG00000021744pabpn19467.066ENSMLEG00000034623-9973.239Mandrillus_leucophaeus
ENSACIG00000021744pabpn19482.143ENSMLEG00000043862BCL2L2-PABPN19482.143Mandrillus_leucophaeus
ENSACIG00000021744pabpn19898.266ENSMAMG00000007979pabpn110095.804Mastacembelus_armatus
ENSACIG00000021744pabpn110097.902ENSMZEG00005011904pabpn110097.902Maylandia_zebra
ENSACIG00000021744pabpn19481.548ENSMAUG00000007383Gm205218566.794Mesocricetus_auratus
ENSACIG00000021744pabpn19482.143ENSMICG00000010002BCL2L2-PABPN17876.577Microcebus_murinus
ENSACIG00000021744pabpn19480.952ENSMOCG00000018557Gm205219089.865Microtus_ochrogaster
ENSACIG00000021744pabpn110099.432ENSMMOG00000005405pabpn110097.552Mola_mola
ENSACIG00000021744pabpn19278.049ENSMODG00000004535-8566.920Monodelphis_domestica
ENSACIG00000021744pabpn110096.853ENSMALG00000019612pabpn110096.853Monopterus_albus
ENSACIG00000021744pabpn19480.357MGP_CAROLIEiJ_G0019276Gm205215482.222Mus_caroli
ENSACIG00000021744pabpn19480.357MGP_CAROLIEiJ_G0019277Pabpn19982.822Mus_caroli
ENSACIG00000021744pabpn19480.952ENSMUSG00000022194Pabpn19982.822Mus_musculus
ENSACIG00000021744pabpn19480.952ENSMUSG00000092232Gm205215482.778Mus_musculus
ENSACIG00000021744pabpn19480.952MGP_PahariEiJ_G0030294Gm205215482.778Mus_pahari
ENSACIG00000021744pabpn19480.952MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSACIG00000021744pabpn19480.952MGP_SPRETEiJ_G0020165Gm205215482.778Mus_spretus
ENSACIG00000021744pabpn19480.952MGP_SPRETEiJ_G0020166Pabpn19982.822Mus_spretus
ENSACIG00000021744pabpn18782.051ENSMPUG00000006775-9082.895Mustela_putorius_furo
ENSACIG00000021744pabpn19480.357ENSMLUG00000028677-7972.523Myotis_lucifugus
ENSACIG00000021744pabpn19480.473ENSMLUG00000012452-7869.295Myotis_lucifugus
ENSACIG00000021744pabpn110083.240ENSMLUG00000003800-9582.778Myotis_lucifugus
ENSACIG00000021744pabpn19482.143ENSNGAG00000019529Gm205215483.889Nannospalax_galili
ENSACIG00000021744pabpn1100100.000ENSNBRG00000023955pabpn1100100.000Neolamprologus_brichardi
ENSACIG00000021744pabpn19482.143ENSNLEG00000015007-6982.051Nomascus_leucogenys
ENSACIG00000021744pabpn19166.871ENSNLEG00000030598-7769.841Nomascus_leucogenys
ENSACIG00000021744pabpn18460.135ENSNLEG00000035292-9960.135Nomascus_leucogenys
ENSACIG00000021744pabpn19481.548ENSODEG00000002083BCL2L2-PABPN16677.404Octodon_degus
ENSACIG00000021744pabpn110072.626ENSODEG00000011555-8971.429Octodon_degus
ENSACIG00000021744pabpn19472.121ENSODEG00000003739-8662.302Octodon_degus
ENSACIG00000021744pabpn110098.252ENSONIG00000008112pabpn110098.252Oreochromis_niloticus
ENSACIG00000021744pabpn18384.354ENSOANG00000009218-10084.354Ornithorhynchus_anatinus
ENSACIG00000021744pabpn19481.548ENSOCUG00000016174PABPN19269.020Oryctolagus_cuniculus
ENSACIG00000021744pabpn19898.844ENSORLG00000027900pabpn110096.503Oryzias_latipes
ENSACIG00000021744pabpn19898.844ENSORLG00020004681pabpn110093.878Oryzias_latipes_hni
ENSACIG00000021744pabpn110099.432ENSORLG00015000018pabpn110093.878Oryzias_latipes_hsok
ENSACIG00000021744pabpn110096.503ENSOMEG00000016618pabpn110096.503Oryzias_melastigma
ENSACIG00000021744pabpn19482.143ENSOGAG00000008710PABPN18467.300Otolemur_garnettii
ENSACIG00000021744pabpn19482.143ENSOARG00000019336BCL2L2-PABPN15083.889Ovis_aries
ENSACIG00000021744pabpn19467.470ENSPPAG00000039421-9367.470Pan_paniscus
ENSACIG00000021744pabpn19482.143ENSPPAG00000028984BCL2L2-PABPN19082.895Pan_paniscus
ENSACIG00000021744pabpn19482.143ENSPPRG00000010567PABPN18467.300Panthera_pardus
ENSACIG00000021744pabpn19482.143ENSPTIG00000001063BCL2L2-PABPN19482.143Panthera_tigris_altaica
ENSACIG00000021744pabpn19464.458ENSPTRG00000047273-9158.000Pan_troglodytes
ENSACIG00000021744pabpn19482.143ENSPTRG00000006167BCL2L27875.799Pan_troglodytes
ENSACIG00000021744pabpn19482.143ENSPANG00000021100BCL2L2-PABPN17875.799Papio_anubis
ENSACIG00000021744pabpn19470.659ENSPANG00000023326-9976.056Papio_anubis
ENSACIG00000021744pabpn110097.159ENSPKIG00000008144-10094.755Paramormyrops_kingsleyae
ENSACIG00000021744pabpn18070.922ENSPKIG00000008340pabpn1l8665.746Paramormyrops_kingsleyae
ENSACIG00000021744pabpn110087.500ENSPKIG00000018052pabpn110090.278Paramormyrops_kingsleyae
ENSACIG00000021744pabpn17677.612ENSPSIG00000011959-9181.301Pelodiscus_sinensis
ENSACIG00000021744pabpn19398.171ENSPMGG00000022027pabpn110090.909Periophthalmus_magnuspinnatus
ENSACIG00000021744pabpn19481.548ENSPEMG00000008332Gm205219089.933Peromyscus_maniculatus_bairdii
ENSACIG00000021744pabpn17387.500ENSPMAG00000006212pabpn19368.398Petromyzon_marinus
ENSACIG00000021744pabpn19479.042ENSPCIG00000027751-8466.920Phascolarctos_cinereus
ENSACIG00000021744pabpn110096.629ENSPFOG00000010351pabpn110092.568Poecilia_formosa
ENSACIG00000021744pabpn110095.833ENSPLAG00000022696pabpn110095.833Poecilia_latipinna
ENSACIG00000021744pabpn110096.629ENSPMEG00000020856pabpn19494.619Poecilia_mexicana
ENSACIG00000021744pabpn110096.629ENSPREG00000011278pabpn110095.486Poecilia_reticulata
ENSACIG00000021744pabpn18782.051ENSPPYG00000005663PABPN18870.000Pongo_abelii
ENSACIG00000021744pabpn18465.584ENSPCAG00000005902PABPN18559.289Procavia_capensis
ENSACIG00000021744pabpn19482.143ENSPCOG00000028047BCL2L2-PABPN17876.577Propithecus_coquereli
ENSACIG00000021744pabpn19481.548ENSPVAG00000005270PABPN18368.235Pteropus_vampyrus
ENSACIG00000021744pabpn1100100.000ENSPNYG00000013182pabpn19498.190Pundamilia_nyererei
ENSACIG00000021744pabpn110062.921ENSPNAG00000021666pabpn1l8467.630Pygocentrus_nattereri
ENSACIG00000021744pabpn110097.727ENSPNAG00000023526pabpn19995.105Pygocentrus_nattereri
ENSACIG00000021744pabpn19481.548ENSRNOG00000042195Pabpn18467.050Rattus_norvegicus
ENSACIG00000021744pabpn19469.643ENSRBIG00000042811-8769.565Rhinopithecus_bieti
ENSACIG00000021744pabpn19471.687ENSRBIG00000039547-7966.047Rhinopithecus_bieti
ENSACIG00000021744pabpn18782.051ENSRBIG00000040762BCL2L2-PABPN15485.057Rhinopithecus_bieti
ENSACIG00000021744pabpn19482.143ENSRROG00000045535BCL2L2-PABPN19482.143Rhinopithecus_roxellana
ENSACIG00000021744pabpn19465.294ENSRROG00000036409-6863.348Rhinopithecus_roxellana
ENSACIG00000021744pabpn19472.289ENSRROG00000040409-7966.047Rhinopithecus_roxellana
ENSACIG00000021744pabpn19476.243ENSSBOG00000026930BCL2L2-PABPN19082.895Saimiri_boliviensis_boliviensis
ENSACIG00000021744pabpn19479.042ENSSHAG00000014841-8483.607Sarcophilus_harrisii
ENSACIG00000021744pabpn110067.598ENSSHAG00000007707-9360.793Sarcophilus_harrisii
ENSACIG00000021744pabpn19495.152ENSSFOG00015012565pabpn110088.462Scleropages_formosus
ENSACIG00000021744pabpn19495.152ENSSFOG00015014718pabpn19495.023Scleropages_formosus
ENSACIG00000021744pabpn17371.875ENSSFOG00015015833pabpn1l7768.235Scleropages_formosus
ENSACIG00000021744pabpn110098.864ENSSMAG00000020157pabpn110096.853Scophthalmus_maximus
ENSACIG00000021744pabpn110097.203ENSSDUG00000020582pabpn110097.203Seriola_dumerili
ENSACIG00000021744pabpn110098.864ENSSLDG00000007118pabpn19497.285Seriola_lalandi_dorsalis
ENSACIG00000021744pabpn19483.929ENSSPUG00000018308-9483.929Sphenodon_punctatus
ENSACIG00000021744pabpn110097.740ENSSPAG00000021658pabpn110096.864Stegastes_partitus
ENSACIG00000021744pabpn19964.607ENSSSCG00000034805-7560.733Sus_scrofa
ENSACIG00000021744pabpn15766.990ENSSSCG00000038472-6667.021Sus_scrofa
ENSACIG00000021744pabpn19482.143ENSSSCG00000002023PABPN18567.300Sus_scrofa
ENSACIG00000021744pabpn110096.591ENSTRUG00000023664pabpn110095.804Takifugu_rubripes
ENSACIG00000021744pabpn19490.964ENSTNIG00000005369pabpn19395.074Tetraodon_nigroviridis
ENSACIG00000021744pabpn19482.143ENSUAMG00000024460PABPN16677.885Ursus_americanus
ENSACIG00000021744pabpn19482.143ENSUMAG00000014288BCL2L2-PABPN15483.889Ursus_maritimus
ENSACIG00000021744pabpn19482.143ENSVVUG00000019912BCL2L2-PABPN17283.516Vulpes_vulpes
ENSACIG00000021744pabpn19484.431ENSXETG00000014597pabpn17178.140Xenopus_tropicalis
ENSACIG00000021744pabpn19787.209ENSXCOG00000005158pabpn19887.209Xiphophorus_couchianus
ENSACIG00000021744pabpn110097.191ENSXMAG00000006196pabpn110093.243Xiphophorus_maculatus

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