EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000021815 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 5458 bases
Position: chrCCOE01001409.1:779007-784464
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000028163	RRM_1	PF00076.22	6.4e-33	1	2
ENSACIP00000028163	RRM_1	PF00076.22	6.4e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000028907	-	618	-	ENSACIP00000028163	205 (aa)	-	-

Gene Model

Click here to download ENSACIG00000021815's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000021815's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000021815	-	87	56.180	ENSACIG00000012946	hnrnpa1b	60	56.180
ENSACIG00000021815	-	89	75.410	ENSACIG00000021834	HNRNPA0	89	71.144
ENSACIG00000021815	-	90	38.542	ENSACIG00000008353	hnrnpd	54	38.012
ENSACIG00000021815	-	87	53.672	ENSACIG00000020389	HNRNPA1P48	74	53.409
ENSACIG00000021815	-	90	39.130	ENSACIG00000017754	-	67	36.364
ENSACIG00000021815	-	75	41.333	ENSACIG00000012502	-	68	41.333
ENSACIG00000021815	-	73	34.483	ENSACIG00000021116	rbm39b	54	33.333
ENSACIG00000021815	-	83	38.824	ENSACIG00000012959	-	54	38.824
ENSACIG00000021815	-	77	35.897	ENSACIG00000001333	tra2a	52	35.227
ENSACIG00000021815	-	76	32.895	ENSACIG00000023083	slirp	78	32.895

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000021815	-	95	54.872	ENSAPOG00000019369	-	53	56.571	Acanthochromis_polyacanthus
ENSACIG00000021815	-	95	54.872	ENSAOCG00000005289	-	53	56.571	Amphiprion_ocellaris
ENSACIG00000021815	-	95	54.872	ENSAPEG00000004179	-	53	56.571	Amphiprion_percula
ENSACIG00000021815	-	90	54.891	ENSATEG00000022918	hnrnpa1a	84	54.494	Anabas_testudineus
ENSACIG00000021815	-	86	74.534	ENSATEG00000003423	-	76	74.534	Anabas_testudineus
ENSACIG00000021815	-	86	62.712	ENSACAG00000017109	-	55	61.667	Anolis_carolinensis
ENSACIG00000021815	-	87	56.180	ENSACLG00000006940	-	53	56.180	Astatotilapia_calliptera
ENSACIG00000021815	-	86	72.571	ENSAMXG00000037730	-	52	71.910	Astyanax_mexicanus
ENSACIG00000021815	-	90	55.135	ENSCSEG00000007589	hnrnpa1a	65	55.114	Cynoglossus_semilaevis
ENSACIG00000021815	-	86	68.182	ENSCSEG00000014051	-	72	68.182	Cynoglossus_semilaevis
ENSACIG00000021815	-	86	56.497	ENSCVAG00000012637	hnrnpa1a	52	56.497	Cyprinodon_variegatus
ENSACIG00000021815	-	90	61.979	ENSDORG00000026425	-	52	62.778	Dipodomys_ordii
ENSACIG00000021815	-	88	74.444	ENSGMOG00000020353	-	94	74.444	Gadus_morhua
ENSACIG00000021815	-	95	55.385	ENSGAFG00000007751	-	52	56.497	Gambusia_affinis
ENSACIG00000021815	-	87	90.503	ENSGAFG00000016803	-	54	90.503	Gambusia_affinis
ENSACIG00000021815	-	87	56.180	ENSHBUG00000005647	hnrnpa1a	53	56.180	Haplochromis_burtoni
ENSACIG00000021815	-	88	75.138	ENSIPUG00000001991	-	77	75.138	Ictalurus_punctatus
ENSACIG00000021815	-	94	50.262	ENSIPUG00000002023	hnrnpa1a	69	52.273	Ictalurus_punctatus
ENSACIG00000021815	-	90	56.216	ENSIPUG00000022440	-	72	57.229	Ictalurus_punctatus
ENSACIG00000021815	-	86	55.367	ENSKMAG00000020859	-	53	55.367	Kryptolebias_marmoratus
ENSACIG00000021815	-	87	55.056	ENSLBEG00000010010	hnrnpa1a	50	56.000	Labrus_bergylta
ENSACIG00000021815	-	87	48.889	ENSMFAG00000028351	-	54	48.889	Macaca_fascicularis
ENSACIG00000021815	-	92	55.319	ENSMAMG00000007606	-	52	55.056	Mastacembelus_armatus
ENSACIG00000021815	-	87	56.180	ENSMZEG00005027173	hnrnpa1a	53	56.180	Maylandia_zebra
ENSACIG00000021815	-	89	54.098	ENSMMOG00000008251	hnrnpa1a	74	54.494	Mola_mola
ENSACIG00000021815	-	87	94.972	ENSMALG00000008886	-	87	94.972	Monopterus_albus
ENSACIG00000021815	-	94	54.404	ENSMALG00000014091	hnrnpa1a	52	54.494	Monopterus_albus
ENSACIG00000021815	-	95	72.165	ENSNBRG00000014469	-	83	76.404	Neolamprologus_brichardi
ENSACIG00000021815	-	87	56.180	ENSNBRG00000018441	-	54	56.180	Neolamprologus_brichardi
ENSACIG00000021815	-	91	62.295	ENSORLG00000029240	-	97	62.778	Oryzias_latipes
ENSACIG00000021815	-	87	56.180	ENSORLG00000008001	-	53	57.143	Oryzias_latipes
ENSACIG00000021815	-	91	59.563	ENSORLG00020022498	-	89	60.000	Oryzias_latipes_hni
ENSACIG00000021815	-	87	56.180	ENSORLG00020006582	hnrnpa1a	83	56.180	Oryzias_latipes_hni
ENSACIG00000021815	-	88	61.878	ENSORLG00020006043	-	61	62.360	Oryzias_latipes_hni
ENSACIG00000021815	-	87	56.180	ENSORLG00015022294	-	54	56.180	Oryzias_latipes_hsok
ENSACIG00000021815	-	87	56.180	ENSOMEG00000015959	-	54	56.180	Oryzias_melastigma
ENSACIG00000021815	-	86	72.571	ENSPMGG00000016392	-	87	72.571	Periophthalmus_magnuspinnatus
ENSACIG00000021815	-	88	56.354	ENSPMGG00000011804	hnrnpa1a	65	57.143	Periophthalmus_magnuspinnatus
ENSACIG00000021815	-	95	55.385	ENSPFOG00000001825	-	52	56.497	Poecilia_formosa
ENSACIG00000021815	-	95	55.385	ENSPMEG00000002425	-	52	56.497	Poecilia_mexicana
ENSACIG00000021815	-	96	71.429	ENSPNYG00000020729	-	91	76.404	Pundamilia_nyererei
ENSACIG00000021815	-	87	52.632	ENSPNAG00000007752	hnrnpa1a	76	52.841	Pygocentrus_nattereri
ENSACIG00000021815	-	90	56.684	ENSPNAG00000021630	-	53	57.714	Pygocentrus_nattereri
ENSACIG00000021815	-	87	53.933	ENSSMAG00000004641	hnrnpa1a	58	53.933	Scophthalmus_maximus
ENSACIG00000021815	-	86	70.238	ENSSMAG00000010279	-	94	70.238	Scophthalmus_maximus
ENSACIG00000021815	-	87	86.592	ENSSMAG00000010246	-	79	86.592	Scophthalmus_maximus
ENSACIG00000021815	-	85	76.879	ENSSDUG00000002431	-	87	76.879	Seriola_dumerili
ENSACIG00000021815	-	91	55.376	ENSSDUG00000013908	hnrnpa1a	84	55.249	Seriola_dumerili
ENSACIG00000021815	-	90	55.435	ENSSLDG00000003718	hnrnpa1a	79	54.819	Seriola_lalandi_dorsalis
ENSACIG00000021815	-	94	54.639	ENSSPAG00000018518	-	53	56.571	Stegastes_partitus
ENSACIG00000021815	-	94	52.821	ENSTRUG00000020491	-	54	53.933	Takifugu_rubripes
ENSACIG00000021815	-	90	74.054	ENSTNIG00000007398	-	69	73.481	Tetraodon_nigroviridis
ENSACIG00000021815	-	87	55.866	ENSXCOG00000009001	-	76	55.932	Xiphophorus_couchianus
ENSACIG00000021815	-	95	54.872	ENSXMAG00000008076	-	52	55.932	Xiphophorus_maculatus