EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000021854 (Gene tree)
Gene ID: -
Gene Symbol: cmss1
Alias: zgc:101814
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 4098 bases
Position: chrCCOE01000607.1:2172526-2176623
Accession: ZDB-GENE-041010-146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000028206	CMS1	PF14617.6	3.4e-29	1	1
ENSACIP00000028206	DEAD	PF00270.29	6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000028951	-	741	-	ENSACIP00000028206	246 (aa)	-	-

Gene Model

Click here to download ENSACIG00000021854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000021854's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000021854	cmss1	75	53.465	ENSG00000184220	CMSS1	98	41.250	Homo_sapiens
ENSACIG00000021854	cmss1	83	73.094	ENSAPOG00000010604	cmss1	97	66.540	Acanthochromis_polyacanthus
ENSACIG00000021854	cmss1	95	50.988	ENSAMEG00000004092	CMSS1	78	54.680	Ailuropoda_melanoleuca
ENSACIG00000021854	cmss1	87	74.678	ENSAOCG00000013361	cmss1	91	73.384	Amphiprion_ocellaris
ENSACIG00000021854	cmss1	84	74.667	ENSAPEG00000005829	cmss1	91	74.144	Amphiprion_percula
ENSACIG00000021854	cmss1	97	74.219	ENSATEG00000008209	cmss1	91	73.664	Anabas_testudineus
ENSACIG00000021854	cmss1	82	52.968	ENSAPLG00000010542	CMSS1	95	52.968	Anas_platyrhynchos
ENSACIG00000021854	cmss1	94	51.779	ENSACAG00000011065	CMSS1	74	55.941	Anolis_carolinensis
ENSACIG00000021854	cmss1	91	49.174	ENSANAG00000023565	CMSS1	77	52.970	Aotus_nancymaae
ENSACIG00000021854	cmss1	98	84.231	ENSACLG00000027294	cmss1	90	83.969	Astatotilapia_calliptera
ENSACIG00000021854	cmss1	74	57.000	ENSAMXG00000002046	cmss1	69	57.635	Astyanax_mexicanus
ENSACIG00000021854	cmss1	75	53.960	ENSBTAG00000013663	CMSS1	73	53.960	Bos_taurus
ENSACIG00000021854	cmss1	91	49.383	ENSCJAG00000000610	CMSS1	77	53.960	Callithrix_jacchus
ENSACIG00000021854	cmss1	91	52.479	ENSCAFG00000009230	CMSS1	73	55.446	Canis_familiaris
ENSACIG00000021854	cmss1	91	52.479	ENSCAFG00020009464	-	74	55.446	Canis_lupus_dingo
ENSACIG00000021854	cmss1	70	56.085	ENSCAFG00020024156	-	59	56.085	Canis_lupus_dingo
ENSACIG00000021854	cmss1	75	53.960	ENSCHIG00000013003	CMSS1	73	53.960	Capra_hircus
ENSACIG00000021854	cmss1	91	51.240	ENSTSYG00000009266	CMSS1	78	53.960	Carlito_syrichta
ENSACIG00000021854	cmss1	68	47.312	ENSCAPG00000013584	CMSS1	87	47.312	Cavia_aperea
ENSACIG00000021854	cmss1	74	55.500	ENSCPOG00000014680	CMSS1	72	55.941	Cavia_porcellus
ENSACIG00000021854	cmss1	91	50.413	ENSCCAG00000034685	CMSS1	77	54.455	Cebus_capucinus
ENSACIG00000021854	cmss1	86	48.770	ENSCATG00000031980	CMSS1	77	54.455	Cercocebus_atys
ENSACIG00000021854	cmss1	74	54.500	ENSCLAG00000011241	CMSS1	87	54.950	Chinchilla_lanigera
ENSACIG00000021854	cmss1	87	48.571	ENSCSAG00000006024	CMSS1	82	54.455	Chlorocebus_sabaeus
ENSACIG00000021854	cmss1	91	42.562	ENSCHOG00000012098	CMSS1	73	44.554	Choloepus_hoffmanni
ENSACIG00000021854	cmss1	74	40.437	ENSCING00000014848	-	90	40.437	Ciona_intestinalis
ENSACIG00000021854	cmss1	51	46.032	ENSCSAVG00000002309	-	99	46.032	Ciona_savignyi
ENSACIG00000021854	cmss1	75	54.455	ENSCANG00000031337	CMSS1	77	54.455	Colobus_angolensis_palliatus
ENSACIG00000021854	cmss1	75	51.980	ENSCGRG00001014305	Cmss1	73	51.980	Cricetulus_griseus_chok1gshd
ENSACIG00000021854	cmss1	75	51.980	ENSCGRG00000006722	Cmss1	79	51.980	Cricetulus_griseus_crigri
ENSACIG00000021854	cmss1	99	65.283	ENSCSEG00000004958	cmss1	91	65.169	Cynoglossus_semilaevis
ENSACIG00000021854	cmss1	97	73.152	ENSCVAG00000005039	cmss1	92	71.970	Cyprinodon_variegatus
ENSACIG00000021854	cmss1	96	56.589	ENSDARG00000112579	cmss1	70	60.591	Danio_rerio
ENSACIG00000021854	cmss1	75	53.960	ENSDNOG00000040418	CMSS1	73	53.960	Dasypus_novemcinctus
ENSACIG00000021854	cmss1	91	51.653	ENSDORG00000010461	Cmss1	72	54.950	Dipodomys_ordii
ENSACIG00000021854	cmss1	54	53.030	ENSEBUG00000002156	-	96	53.030	Eptatretus_burgeri
ENSACIG00000021854	cmss1	74	52.500	ENSEASG00005010966	CMSS1	92	52.970	Equus_asinus_asinus
ENSACIG00000021854	cmss1	91	48.760	ENSECAG00000015662	CMSS1	89	52.475	Equus_caballus
ENSACIG00000021854	cmss1	98	58.846	ENSELUG00000019459	cmss1	68	66.010	Esox_lucius
ENSACIG00000021854	cmss1	91	52.066	ENSFCAG00000044577	CMSS1	72	55.446	Felis_catus
ENSACIG00000021854	cmss1	82	52.055	ENSFALG00000005816	CMSS1	85	53.465	Ficedula_albicollis
ENSACIG00000021854	cmss1	75	55.446	ENSFDAG00000012577	CMSS1	89	55.446	Fukomys_damarensis
ENSACIG00000021854	cmss1	87	71.121	ENSFHEG00000012008	cmss1	94	71.053	Fundulus_heteroclitus
ENSACIG00000021854	cmss1	98	62.934	ENSGMOG00000016729	cmss1	90	61.390	Gadus_morhua
ENSACIG00000021854	cmss1	75	55.446	ENSGALG00000015267	CMSS1	77	54.950	Gallus_gallus
ENSACIG00000021854	cmss1	99	70.566	ENSGAFG00000021217	cmss1	98	70.566	Gambusia_affinis
ENSACIG00000021854	cmss1	98	68.217	ENSGACG00000002798	cmss1	90	67.829	Gasterosteus_aculeatus
ENSACIG00000021854	cmss1	91	52.675	ENSGAGG00000019861	CMSS1	79	55.446	Gopherus_agassizii
ENSACIG00000021854	cmss1	75	53.960	ENSGGOG00000014125	CMSS1	77	53.960	Gorilla_gorilla
ENSACIG00000021854	cmss1	98	81.923	ENSHBUG00000008431	cmss1	92	81.298	Haplochromis_burtoni
ENSACIG00000021854	cmss1	74	54.000	ENSHGLG00000019481	CMSS1	82	54.455	Heterocephalus_glaber_female
ENSACIG00000021854	cmss1	74	54.000	ENSHGLG00100010314	CMSS1	81	54.455	Heterocephalus_glaber_male
ENSACIG00000021854	cmss1	96	67.589	ENSHCOG00000003222	cmss1	77	69.912	Hippocampus_comes
ENSACIG00000021854	cmss1	94	59.200	ENSIPUG00000011591	cmss1	70	63.547	Ictalurus_punctatus
ENSACIG00000021854	cmss1	91	50.000	ENSSTOG00000019366	CMSS1	73	53.465	Ictidomys_tridecemlineatus
ENSACIG00000021854	cmss1	79	52.830	ENSJJAG00000014894	Cmss1	90	54.455	Jaculus_jaculus
ENSACIG00000021854	cmss1	100	71.032	ENSKMAG00000002390	cmss1	99	70.635	Kryptolebias_marmoratus
ENSACIG00000021854	cmss1	100	66.160	ENSLBEG00000006298	cmss1	99	65.399	Labrus_bergylta
ENSACIG00000021854	cmss1	75	57.426	ENSLACG00000009293	CMSS1	88	57.426	Latimeria_chalumnae
ENSACIG00000021854	cmss1	98	50.000	ENSLOCG00000009391	cmss1	71	51.485	Lepisosteus_oculatus
ENSACIG00000021854	cmss1	74	54.500	ENSLAFG00000017509	CMSS1	89	54.950	Loxodonta_africana
ENSACIG00000021854	cmss1	86	48.361	ENSMFAG00000045006	CMSS1	77	53.960	Macaca_fascicularis
ENSACIG00000021854	cmss1	87	47.755	ENSMMUG00000002939	CMSS1	85	53.646	Macaca_mulatta
ENSACIG00000021854	cmss1	86	48.361	ENSMNEG00000031315	CMSS1	77	53.960	Macaca_nemestrina
ENSACIG00000021854	cmss1	86	48.361	ENSMLEG00000033660	CMSS1	77	53.960	Mandrillus_leucophaeus
ENSACIG00000021854	cmss1	99	73.384	ENSMAMG00000017176	cmss1	91	73.384	Mastacembelus_armatus
ENSACIG00000021854	cmss1	98	84.231	ENSMZEG00005021886	cmss1	90	83.969	Maylandia_zebra
ENSACIG00000021854	cmss1	75	55.446	ENSMGAG00000014360	CMSS1	89	55.446	Meleagris_gallopavo
ENSACIG00000021854	cmss1	75	46.739	ENSMAUG00000020609	Cmss1	66	46.739	Mesocricetus_auratus
ENSACIG00000021854	cmss1	91	51.440	ENSMICG00000048977	CMSS1	78	55.446	Microcebus_murinus
ENSACIG00000021854	cmss1	75	53.465	ENSMOCG00000021937	Cmss1	73	53.465	Microtus_ochrogaster
ENSACIG00000021854	cmss1	96	63.137	ENSMMOG00000019794	cmss1	97	62.353	Mola_mola
ENSACIG00000021854	cmss1	99	48.106	ENSMODG00000002275	CMSS1	76	54.455	Monodelphis_domestica
ENSACIG00000021854	cmss1	97	72.763	ENSMALG00000004250	cmss1	88	70.703	Monopterus_albus
ENSACIG00000021854	cmss1	75	54.950	MGP_CAROLIEiJ_G0020824	Cmss1	73	54.950	Mus_caroli
ENSACIG00000021854	cmss1	75	53.960	ENSMUSG00000022748	Cmss1	73	53.960	Mus_musculus
ENSACIG00000021854	cmss1	75	53.960	MGP_PahariEiJ_G0016524	Cmss1	73	53.960	Mus_pahari
ENSACIG00000021854	cmss1	75	53.960	MGP_SPRETEiJ_G0021724	Cmss1	73	53.960	Mus_spretus
ENSACIG00000021854	cmss1	91	51.037	ENSMPUG00000011324	CMSS1	78	54.229	Mustela_putorius_furo
ENSACIG00000021854	cmss1	91	50.000	ENSMLUG00000001131	CMSS1	78	53.922	Myotis_lucifugus
ENSACIG00000021854	cmss1	75	52.475	ENSNGAG00000020316	Cmss1	72	52.475	Nannospalax_galili
ENSACIG00000021854	cmss1	98	84.231	ENSNBRG00000003095	cmss1	90	83.969	Neolamprologus_brichardi
ENSACIG00000021854	cmss1	74	54.000	ENSNLEG00000034172	CMSS1	77	54.455	Nomascus_leucogenys
ENSACIG00000021854	cmss1	86	43.478	ENSMEUG00000014505	CMSS1	89	44.554	Notamacropus_eugenii
ENSACIG00000021854	cmss1	75	54.455	ENSOPRG00000002986	CMSS1	73	54.455	Ochotona_princeps
ENSACIG00000021854	cmss1	75	52.970	ENSODEG00000003558	-	75	52.475	Octodon_degus
ENSACIG00000021854	cmss1	98	43.307	ENSODEG00000001853	-	71	47.179	Octodon_degus
ENSACIG00000021854	cmss1	87	44.206	ENSODEG00000009446	-	78	47.030	Octodon_degus
ENSACIG00000021854	cmss1	74	55.000	ENSODEG00000005226	-	72	55.446	Octodon_degus
ENSACIG00000021854	cmss1	98	84.615	ENSONIG00000006678	cmss1	99	84.615	Oreochromis_niloticus
ENSACIG00000021854	cmss1	82	53.425	ENSOANG00000007529	CMSS1	87	55.446	Ornithorhynchus_anatinus
ENSACIG00000021854	cmss1	91	50.413	ENSOCUG00000025366	CMSS1	73	53.960	Oryctolagus_cuniculus
ENSACIG00000021854	cmss1	98	66.923	ENSORLG00000020340	cmss1	91	65.779	Oryzias_latipes
ENSACIG00000021854	cmss1	98	54.615	ENSORLG00020012235	cmss1	98	53.612	Oryzias_latipes_hni
ENSACIG00000021854	cmss1	99	56.554	ENSORLG00015015551	cmss1	76	62.069	Oryzias_latipes_hsok
ENSACIG00000021854	cmss1	98	66.923	ENSOMEG00000012555	cmss1	90	66.920	Oryzias_melastigma
ENSACIG00000021854	cmss1	75	54.950	ENSOGAG00000002045	CMSS1	89	54.950	Otolemur_garnettii
ENSACIG00000021854	cmss1	75	53.695	ENSOARG00000017899	CMSS1	70	53.695	Ovis_aries
ENSACIG00000021854	cmss1	75	53.960	ENSPPAG00000038515	CMSS1	74	53.960	Pan_paniscus
ENSACIG00000021854	cmss1	91	52.066	ENSPPRG00000016767	CMSS1	72	55.446	Panthera_pardus
ENSACIG00000021854	cmss1	91	51.653	ENSPTIG00000018274	CMSS1	72	54.950	Panthera_tigris_altaica
ENSACIG00000021854	cmss1	75	53.960	ENSPTRG00000015157	CMSS1	82	53.960	Pan_troglodytes
ENSACIG00000021854	cmss1	75	54.455	ENSPANG00000019980	CMSS1	80	54.455	Papio_anubis
ENSACIG00000021854	cmss1	99	54.373	ENSPKIG00000012609	cmss1	75	61.084	Paramormyrops_kingsleyae
ENSACIG00000021854	cmss1	87	54.545	ENSPSIG00000003849	CMSS1	88	56.931	Pelodiscus_sinensis
ENSACIG00000021854	cmss1	84	65.517	ENSPMGG00000010286	cmss1	88	70.588	Periophthalmus_magnuspinnatus
ENSACIG00000021854	cmss1	75	52.970	ENSPEMG00000016384	Cmss1	72	52.970	Peromyscus_maniculatus_bairdii
ENSACIG00000021854	cmss1	76	44.118	ENSPMAG00000001146	cmss1	99	44.335	Petromyzon_marinus
ENSACIG00000021854	cmss1	91	50.413	ENSPCIG00000015656	CMSS1	77	53.465	Phascolarctos_cinereus
ENSACIG00000021854	cmss1	98	75.096	ENSPFOG00000016849	cmss1	92	75.000	Poecilia_formosa
ENSACIG00000021854	cmss1	98	74.713	ENSPLAG00000008323	cmss1	92	74.621	Poecilia_latipinna
ENSACIG00000021854	cmss1	98	74.713	ENSPMEG00000021020	cmss1	92	74.621	Poecilia_mexicana
ENSACIG00000021854	cmss1	98	74.330	ENSPREG00000007618	cmss1	90	74.242	Poecilia_reticulata
ENSACIG00000021854	cmss1	75	53.960	ENSPPYG00000013606	CMSS1	74	53.960	Pongo_abelii
ENSACIG00000021854	cmss1	91	51.653	ENSPCOG00000020035	CMSS1	78	54.950	Propithecus_coquereli
ENSACIG00000021854	cmss1	91	42.562	ENSPVAG00000017031	CMSS1	72	44.059	Pteropus_vampyrus
ENSACIG00000021854	cmss1	88	82.051	ENSPNYG00000013428	cmss1	87	81.780	Pundamilia_nyererei
ENSACIG00000021854	cmss1	98	57.692	ENSPNAG00000007912	cmss1	74	61.644	Pygocentrus_nattereri
ENSACIG00000021854	cmss1	75	53.960	ENSRNOG00000027888	Cmss1	79	53.960	Rattus_norvegicus
ENSACIG00000021854	cmss1	86	48.361	ENSRBIG00000037931	CMSS1	77	53.960	Rhinopithecus_bieti
ENSACIG00000021854	cmss1	86	51.770	ENSRROG00000042910	CMSS1	76	58.696	Rhinopithecus_roxellana
ENSACIG00000021854	cmss1	91	49.590	ENSSBOG00000030980	CMSS1	77	53.960	Saimiri_boliviensis_boliviensis
ENSACIG00000021854	cmss1	75	54.950	ENSSHAG00000009321	CMSS1	80	54.950	Sarcophilus_harrisii
ENSACIG00000021854	cmss1	75	65.025	ENSSFOG00015001509	cmss1	70	65.025	Scleropages_formosus
ENSACIG00000021854	cmss1	97	71.984	ENSSMAG00000001653	cmss1	91	70.301	Scophthalmus_maximus
ENSACIG00000021854	cmss1	98	73.664	ENSSDUG00000007719	cmss1	92	74.340	Seriola_dumerili
ENSACIG00000021854	cmss1	98	67.407	ENSSLDG00000012300	cmss1	92	67.647	Seriola_lalandi_dorsalis
ENSACIG00000021854	cmss1	91	42.739	ENSSARG00000003584	CMSS1	72	43.284	Sorex_araneus
ENSACIG00000021854	cmss1	75	53.960	ENSSPUG00000003865	CMSS1	89	53.960	Sphenodon_punctatus
ENSACIG00000021854	cmss1	99	70.455	ENSSPAG00000019182	cmss1	79	68.914	Stegastes_partitus
ENSACIG00000021854	cmss1	91	52.066	ENSSSCG00000011970	CMSS1	72	53.960	Sus_scrofa
ENSACIG00000021854	cmss1	75	53.465	ENSTGUG00000013635	CMSS1	88	53.465	Taeniopygia_guttata
ENSACIG00000021854	cmss1	96	67.323	ENSTRUG00000015265	cmss1	79	70.721	Takifugu_rubripes
ENSACIG00000021854	cmss1	75	63.547	ENSTNIG00000002880	cmss1	74	63.547	Tetraodon_nigroviridis
ENSACIG00000021854	cmss1	59	60.976	ENSTBEG00000016722	CMSS1	52	60.976	Tupaia_belangeri
ENSACIG00000021854	cmss1	91	51.667	ENSTTRG00000001562	CMSS1	72	53.000	Tursiops_truncatus
ENSACIG00000021854	cmss1	91	52.066	ENSUAMG00000024209	CMSS1	91	54.950	Ursus_americanus
ENSACIG00000021854	cmss1	100	49.064	ENSUMAG00000001983	CMSS1	78	54.950	Ursus_maritimus
ENSACIG00000021854	cmss1	57	58.571	ENSVPAG00000000263	CMSS1	50	58.571	Vicugna_pacos
ENSACIG00000021854	cmss1	91	52.066	ENSVVUG00000021647	-	82	55.446	Vulpes_vulpes
ENSACIG00000021854	cmss1	75	54.455	ENSVVUG00000007776	-	80	54.455	Vulpes_vulpes
ENSACIG00000021854	cmss1	98	50.379	ENSXETG00000011858	cmss1	73	53.695	Xenopus_tropicalis
ENSACIG00000021854	cmss1	99	70.037	ENSXCOG00000018724	cmss1	90	64.875	Xiphophorus_couchianus
ENSACIG00000021854	cmss1	99	70.037	ENSXMAG00000011243	cmss1	99	64.875	Xiphophorus_maculatus