EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000021941 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 4658 bases
Position: chrCCOE01000292.1:1805890-1810547
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000028313	RRM_1	PF00076.22	3.7e-29	1	3
ENSACIP00000028313	RRM_1	PF00076.22	3.7e-29	2	3
ENSACIP00000028313	RRM_1	PF00076.22	3.7e-29	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000029063	-	1068	-	ENSACIP00000028313	355 (aa)	-	-

Gene Model

Click here to download ENSACIG00000021941's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000021941's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000021941	-	86	36.702	ENSACIG00000013234	ncl	64	35.065

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000021941	-	89	66.092	ENSACLG00000009613	-	96	66.092	Astatotilapia_calliptera
ENSACIG00000021941	-	94	48.929	ENSCSEG00000017388	-	76	48.929	Cynoglossus_semilaevis
ENSACIG00000021941	-	95	48.639	ENSFHEG00000017265	-	85	48.475	Fundulus_heteroclitus
ENSACIG00000021941	-	84	38.043	ENSGMOG00000017831	-	72	36.877	Gadus_morhua
ENSACIG00000021941	-	93	46.290	ENSGAFG00000018408	-	80	46.996	Gambusia_affinis
ENSACIG00000021941	-	95	63.043	ENSHBUG00000006683	-	98	64.972	Haplochromis_burtoni
ENSACIG00000021941	-	88	44.337	ENSHCOG00000020361	-	93	44.337	Hippocampus_comes
ENSACIG00000021941	-	89	48.544	ENSKMAG00000003154	-	86	48.544	Kryptolebias_marmoratus
ENSACIG00000021941	-	95	63.043	ENSMZEG00005005300	-	98	64.972	Maylandia_zebra
ENSACIG00000021941	-	92	48.731	ENSMMOG00000018095	-	89	47.176	Mola_mola
ENSACIG00000021941	-	84	62.418	ENSMALG00000006207	-	71	61.231	Monopterus_albus
ENSACIG00000021941	-	85	45.125	ENSPMGG00000013705	-	90	46.296	Periophthalmus_magnuspinnatus
ENSACIG00000021941	-	84	48.592	ENSPFOG00000016767	-	87	47.811	Poecilia_formosa
ENSACIG00000021941	-	86	48.944	ENSPLAG00000000597	-	80	48.944	Poecilia_latipinna
ENSACIG00000021941	-	93	46.753	ENSPMEG00000004046	-	80	49.474	Poecilia_mexicana
ENSACIG00000021941	-	85	47.079	ENSPREG00000007170	-	82	47.079	Poecilia_reticulata
ENSACIG00000021941	-	95	62.735	ENSPNYG00000000391	-	98	64.624	Pundamilia_nyererei
ENSACIG00000021941	-	85	43.455	ENSTRUG00000023880	-	79	43.455	Takifugu_rubripes
ENSACIG00000021941	-	93	44.118	ENSXMAG00000004403	-	81	46.996	Xiphophorus_maculatus