EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000022263 (Gene tree)
Gene ID: -
Gene Symbol: ptcd3
Alias: fa08d08|wu:fa08d08|zgc:123014
Full Name: pentatricopeptide repeat domain 3
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 5450 bases
Position: chrCCOE01001179.1:1031144-1036593
Accession: ZDB-GENE-030131-6849
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000028772	PPR	PF01535.20	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000029536	-	1734	-	ENSACIP00000028772	578 (aa)	-	-

Gene Model

Click here to download ENSACIG00000022263's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000022263's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000022263	ptcd3	100	73.856	ENSAOCG00000017186	ptcd3	88	73.856	Amphiprion_ocellaris
ENSACIG00000022263	ptcd3	100	74.020	ENSAPEG00000016069	ptcd3	88	74.020	Amphiprion_percula
ENSACIG00000022263	ptcd3	96	45.470	ENSAPLG00000005086	PTCD3	96	45.470	Anas_platyrhynchos
ENSACIG00000022263	ptcd3	100	83.850	ENSACLG00000020653	ptcd3	90	83.850	Astatotilapia_calliptera
ENSACIG00000022263	ptcd3	99	59.672	ENSAMXG00000011570	ptcd3	90	59.672	Astyanax_mexicanus
ENSACIG00000022263	ptcd3	100	75.163	ENSCVAG00000020820	ptcd3	96	75.249	Cyprinodon_variegatus
ENSACIG00000022263	ptcd3	94	68.103	ENSGAFG00000015291	ptcd3	94	68.103	Gambusia_affinis
ENSACIG00000022263	ptcd3	100	84.013	ENSHBUG00000020056	ptcd3	94	84.080	Haplochromis_burtoni
ENSACIG00000022263	ptcd3	100	72.683	ENSLBEG00000015349	ptcd3	90	72.683	Labrus_bergylta
ENSACIG00000022263	ptcd3	100	84.013	ENSMZEG00005004980	ptcd3	90	84.013	Maylandia_zebra
ENSACIG00000022263	ptcd3	99	44.265	ENSMGAG00000013124	PTCD3	96	44.426	Meleagris_gallopavo
ENSACIG00000022263	ptcd3	100	70.617	ENSMALG00000013282	ptcd3	90	70.617	Monopterus_albus
ENSACIG00000022263	ptcd3	99	85.789	ENSNBRG00000000447	ptcd3	100	85.789	Neolamprologus_brichardi
ENSACIG00000022263	ptcd3	100	84.666	ENSONIG00000015886	ptcd3	94	84.365	Oreochromis_niloticus
ENSACIG00000022263	ptcd3	100	75.654	ENSORLG00000008776	ptcd3	92	75.654	Oryzias_latipes
ENSACIG00000022263	ptcd3	100	75.490	ENSORLG00020020676	ptcd3	89	75.490	Oryzias_latipes_hni
ENSACIG00000022263	ptcd3	96	61.102	ENSORLG00015015978	ptcd3	99	61.102	Oryzias_latipes_hsok
ENSACIG00000022263	ptcd3	100	73.102	ENSPFOG00000004442	ptcd3	94	73.102	Poecilia_formosa
ENSACIG00000022263	ptcd3	91	70.358	ENSPLAG00000021401	ptcd3	92	70.358	Poecilia_latipinna
ENSACIG00000022263	ptcd3	98	67.899	ENSPMEG00000007153	ptcd3	100	71.698	Poecilia_mexicana
ENSACIG00000022263	ptcd3	99	53.429	ENSSFOG00015019643	ptcd3	95	53.659	Scleropages_formosus
ENSACIG00000022263	ptcd3	89	50.362	ENSTGUG00000010760	PTCD3	99	50.362	Taeniopygia_guttata
ENSACIG00000022263	ptcd3	99	65.472	ENSTRUG00000003939	ptcd3	92	65.472	Takifugu_rubripes